RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 CRB1P82279 1406 aa27.69■■■□□ 2.02
SMC4-222ENST00000490207 ZRANB1Q9UGI0 708 aa27.69■■■□□ 2.02
SMC4-222ENST00000490207 PARP4Q9UKK3 1724 aaKnown RBP27.68■■■□□ 2.02
SMC4-222ENST00000490207 ARHGEF25Q86VW2 580 aa27.68■■■□□ 2.02
SMC4-222ENST00000490207 MYOM1P52179 1685 aa27.68■■■□□ 2.02
SMC4-222ENST00000490207 RGPD1P0DJD0 1748 aa27.67■■■□□ 2.02
SMC4-222ENST00000490207 BARGINQ6ZT62 677 aa27.67■■■□□ 2.02
SMC4-222ENST00000490207 ANKRD36BQ8N2N9 1353 aa27.67■■■□□ 2.02
SMC4-222ENST00000490207 OVOS2A0A0J9YW53 1432 aa27.67■■■□□ 2.02
SMC4-222ENST00000490207 OVOS2Q6IE36 1432 aa27.67■■■□□ 2.02
SMC4-222ENST00000490207 TCP11L2Q8N4U5 519 aa27.66■■■□□ 2.02
SMC4-222ENST00000490207 THRAP3Q9Y2W1 955 aaKnown RBP27.64■■■□□ 2.02
SMC4-222ENST00000490207 CDCA8Q53HL2 280 aa27.63■■■□□ 2.01
SMC4-222ENST00000490207 SF3B2Q13435 895 aaKnown RBP27.62■■■□□ 2.01
SMC4-222ENST00000490207 AXIN2Q9Y2T1 843 aa27.62■■■□□ 2.01
SMC4-222ENST00000490207 TNS1Q9HBL0 1735 aaKnown RBP27.61■■■□□ 2.01
SMC4-222ENST00000490207 LRRC37A3O60309 1634 aa27.61■■■□□ 2.01
SMC4-222ENST00000490207 WDR17Q8IZU2 1322 aa27.61■■■□□ 2.01
SMC4-222ENST00000490207 KIF20BQ96Q89 1820 aa27.6■■■□□ 2.01
SMC4-222ENST00000490207 FAM182BQ5T319 152 aa27.6■■■□□ 2.01
SMC4-222ENST00000490207 TOM1L2Q6ZVM7 507 aa27.6■■■□□ 2.01
SMC4-222ENST00000490207 CSB-PGBD3P0DP91 1061 aa27.55■■■□□ 2
SMC4-222ENST00000490207 DEFB132Q7Z7B7 95 aa27.55■■■□□ 2
SMC4-222ENST00000490207 PDE3BQ13370 1112 aa27.54■■■□□ 2
SMC4-222ENST00000490207 COG3Q96JB2 828 aa27.53■■■□□ 2
SMC4-222ENST00000490207 BAG6P46379 1132 aa27.51■■□□□ 1.99
SMC4-222ENST00000490207 FAM196AQ6ZSG2 479 aa27.51■■□□□ 1.99
SMC4-222ENST00000490207 FAM208AQ9UK61 1670 aaKnown RBP27.51■■□□□ 1.99
SMC4-222ENST00000490207 EIF4G2P78344 907 aaKnown RBP eCLIP27.5■■□□□ 1.99
SMC4-222ENST00000490207 CARD10Q9BWT7 1032 aa27.5■■□□□ 1.99
SMC4-222ENST00000490207 PEAK1Q9H792 1746 aa27.5■■□□□ 1.99
SMC4-222ENST00000490207 CCDC7Q96M83 1385 aa27.49■■□□□ 1.99
SMC4-222ENST00000490207 ERBB3P21860 1342 aa27.49■■□□□ 1.99
SMC4-222ENST00000490207 DISP2A7MBM2 1401 aa27.49■■□□□ 1.99
SMC4-222ENST00000490207 HSPA5P11021 654 aaKnown RBP27.47■■□□□ 1.99
SMC4-222ENST00000490207 NSD3Q9BZ95 1437 aa27.47■■□□□ 1.99
SMC4-222ENST00000490207 DDB1Q16531 1140 aa27.46■■□□□ 1.99
SMC4-222ENST00000490207 CDCA7Q9BWT1 371 aaPredicted RBP27.46■■□□□ 1.99
SMC4-222ENST00000490207 OVOS2A0A0G2JMS6 1433 aa27.46■■□□□ 1.99
SMC4-222ENST00000490207 SBF2Q86WG5 1849 aa27.44■■□□□ 1.98
SMC4-222ENST00000490207 FYB1O15117 783 aa27.44■■□□□ 1.98
SMC4-222ENST00000490207 TRIM37O94972 964 aa27.44■■□□□ 1.98
SMC4-222ENST00000490207 ANKRD24Q8TF21 1146 aa27.44■■□□□ 1.98
SMC4-222ENST00000490207 GGNBP2Q9H3C7 697 aa27.44■■□□□ 1.98
SMC4-222ENST00000490207 IP6K1Q92551 441 aa27.42■■□□□ 1.98
SMC4-222ENST00000490207 POLR3GLQ9BT43 218 aa27.42■■□□□ 1.98
SMC4-222ENST00000490207 MAP3K19Q56UN5 1328 aa27.41■■□□□ 1.98
SMC4-222ENST00000490207 NLRP2Q9NX02 1062 aa27.41■■□□□ 1.98
SMC4-222ENST00000490207 TNS2Q63HR2 1409 aa27.41■■□□□ 1.98
SMC4-222ENST00000490207 RTL1A6NKG5 1358 aa27.4■■□□□ 1.98
SMC4-222ENST00000490207 EN1Q05925 392 aaPredicted RBP27.4■■□□□ 1.98
SMC4-222ENST00000490207 CARD14Q9BXL6 1004 aa27.4■■□□□ 1.98
SMC4-222ENST00000490207 C11orf95C9JLR9 678 aaPredicted RBP27.39■■□□□ 1.98
SMC4-222ENST00000490207 RGPD2P0DJD1 1756 aa27.39■■□□□ 1.98
SMC4-222ENST00000490207 RREB1Q92766 1687 aa27.39■■□□□ 1.97
SMC4-222ENST00000490207 ANKRD26Q9UPS8 1709 aa27.38■■□□□ 1.97
SMC4-222ENST00000490207 FBLN1P23142 703 aa27.38■■□□□ 1.97
SMC4-222ENST00000490207 AMPHP49418 695 aa27.38■■□□□ 1.97
SMC4-222ENST00000490207 HOXC9P31274 260 aa27.37■■□□□ 1.97
SMC4-222ENST00000490207 RRS1Q15050 365 aaKnown RBP27.35■■□□□ 1.97
SMC4-222ENST00000490207 LTV1Q96GA3 475 aaPredicted RBP27.35■■□□□ 1.97
SMC4-222ENST00000490207 APBA3O96018 575 aa27.34■■□□□ 1.97
SMC4-222ENST00000490207 MARCH10Q8NA82 808 aaPredicted RBP27.34■■□□□ 1.97
SMC4-222ENST00000490207 RGPD3A6NKT7 1758 aaPredicted RBP27.34■■□□□ 1.97
SMC4-222ENST00000490207 RGPD4Q7Z3J3 1758 aa27.34■■□□□ 1.97
SMC4-222ENST00000490207 NUP188Q5SRE5 1749 aa27.33■■□□□ 1.97
SMC4-222ENST00000490207 EXOC5O00471 708 aa27.33■■□□□ 1.97
SMC4-222ENST00000490207 PARD3Q8TEW0 1356 aa27.33■■□□□ 1.97
SMC4-222ENST00000490207 BCL9O00512 1426 aa27.33■■□□□ 1.96
SMC4-222ENST00000490207 IL2RBP14784 551 aa27.32■■□□□ 1.96
SMC4-222ENST00000490207 EZH2Q15910 746 aaKnown RBP27.32■■□□□ 1.96
SMC4-222ENST00000490207 CGNL1Q0VF96 1302 aa27.32■■□□□ 1.96
SMC4-222ENST00000490207 CAMKK2Q96RR4 588 aa27.3■■□□□ 1.96
SMC4-222ENST00000490207 SMG6Q86US8 1419 aaKnown RBP27.3■■□□□ 1.96
SMC4-222ENST00000490207 FLT4P35916 1363 aa27.29■■□□□ 1.96
SMC4-222ENST00000490207 NHSQ6T4R5 1651 aa27.29■■□□□ 1.96
SMC4-222ENST00000490207 KIF24Q5T7B8 1368 aa27.28■■□□□ 1.96
SMC4-222ENST00000490207 MAP2P11137 1827 aaKnown RBP27.27■■□□□ 1.96
SMC4-222ENST00000490207 SHANK3Q9BYB0 1731 aa27.25■■□□□ 1.95
SMC4-222ENST00000490207 INSRP06213 1382 aa27.24■■□□□ 1.95
SMC4-222ENST00000490207 BCL11BQ9C0K0 894 aaPredicted RBP27.23■■□□□ 1.95
SMC4-222ENST00000490207 PANK3Q9H999 370 aa27.23■■□□□ 1.95
SMC4-222ENST00000490207 PSDA5PKW4 1024 aaPredicted RBP27.22■■□□□ 1.95
SMC4-222ENST00000490207 EMILIN1Q9Y6C2 1016 aa27.22■■□□□ 1.95
SMC4-222ENST00000490207 MEGF6O75095 1541 aa27.21■■□□□ 1.95
SMC4-222ENST00000490207 HSP90AB2PQ58FF8 381 aa27.21■■□□□ 1.95
SMC4-222ENST00000490207 PTF1AQ7RTS3 328 aa27.2■■□□□ 1.94
SMC4-222ENST00000490207 NSD2O96028 1365 aa27.19■■□□□ 1.94
SMC4-222ENST00000490207 LRP5O75197 1615 aa27.19■■□□□ 1.94
SMC4-222ENST00000490207 NBPF6Q5VWK0 638 aa27.18■■□□□ 1.94
SMC4-222ENST00000490207 NBPF4Q96M43 638 aa27.18■■□□□ 1.94
SMC4-222ENST00000490207 KIF7Q2M1P5 1343 aa27.17■■□□□ 1.94
SMC4-222ENST00000490207 USHBP1Q8N6Y0 703 aa27.17■■□□□ 1.94
SMC4-222ENST00000490207 BTAF1O14981 1849 aa27.17■■□□□ 1.94
SMC4-222ENST00000490207 DOT1LQ8TEK3 1739 aa27.16■■□□□ 1.94
SMC4-222ENST00000490207 PLSCR1O15162 318 aa27.16■■□□□ 1.94
SMC4-222ENST00000490207 R3HDM1Q15032 1099 aaKnown RBP27.16■■□□□ 1.94
SMC4-222ENST00000490207 PPM1GO15355 546 aaPredicted RBP27.15■■□□□ 1.94
SMC4-222ENST00000490207 ACSBG1Q96GR2 724 aa27.14■■□□□ 1.94
SMC4-222ENST00000490207 KAT6BQ8WYB5 2073 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms