RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 WDR17Q8IZU2 1322 aa22.75■■□□□ 1.23
PLOD3-216ENST00000489927 ARHGEF25Q86VW2 580 aa22.74■■□□□ 1.23
PLOD3-216ENST00000489927 SOX12O15370 315 aa22.73■■□□□ 1.23
PLOD3-216ENST00000489927 AKAP12Q02952 1782 aa22.72■■□□□ 1.23
PLOD3-216ENST00000489927 KCNH5Q8NCM2 988 aa22.72■■□□□ 1.23
PLOD3-216ENST00000489927 TTC21AQ8NDW8 1320 aa22.71■■□□□ 1.23
PLOD3-216ENST00000489927 WNK3Q9BYP7 1800 aa22.69■■□□□ 1.22
PLOD3-216ENST00000489927 KTN1Q86UP2 1357 aaKnown RBP22.69■■□□□ 1.22
PLOD3-216ENST00000489927 PTF1AQ7RTS3 328 aa22.69■■□□□ 1.22
PLOD3-216ENST00000489927 SBF2Q86WG5 1849 aa22.68■■□□□ 1.22
PLOD3-216ENST00000489927 NFAT5O94916 1531 aa22.68■■□□□ 1.22
PLOD3-216ENST00000489927 PLSCR1O15162 318 aa22.68■■□□□ 1.22
PLOD3-216ENST00000489927 MARCH10Q8NA82 808 aaPredicted RBP22.68■■□□□ 1.22
PLOD3-216ENST00000489927 CDCA7Q9BWT1 371 aaPredicted RBP22.68■■□□□ 1.22
PLOD3-216ENST00000489927 BCL11BQ9C0K0 894 aaPredicted RBP22.68■■□□□ 1.22
PLOD3-216ENST00000489927 CSB-PGBD3P0DP91 1061 aa22.67■■□□□ 1.22
PLOD3-216ENST00000489927 CARD10Q9BWT7 1032 aa22.67■■□□□ 1.22
PLOD3-216ENST00000489927 RGPD3A6NKT7 1758 aaPredicted RBP22.67■■□□□ 1.22
PLOD3-216ENST00000489927 RGPD4Q7Z3J3 1758 aa22.67■■□□□ 1.22
PLOD3-216ENST00000489927 RGPD5Q99666 1765 aa22.67■■□□□ 1.22
PLOD3-216ENST00000489927 BCL9O00512 1426 aa22.65■■□□□ 1.22
PLOD3-216ENST00000489927 SPON1Q9HCB6 807 aa22.64■■□□□ 1.21
PLOD3-216ENST00000489927 SBNO2Q9Y2G9 1366 aa22.63■■□□□ 1.21
PLOD3-216ENST00000489927 MON2Q7Z3U7 1717 aa22.63■■□□□ 1.21
PLOD3-216ENST00000489927 KCNQ2O43526 872 aa22.63■■□□□ 1.21
PLOD3-216ENST00000489927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.63■■□□□ 1.21
PLOD3-216ENST00000489927 ANO8Q9HCE9 1232 aaPredicted RBP22.63■■□□□ 1.21
PLOD3-216ENST00000489927 ABCC6O95255 1503 aa22.62■■□□□ 1.21
PLOD3-216ENST00000489927 CD163L1Q9NR16 1453 aa22.61■■□□□ 1.21
PLOD3-216ENST00000489927 PROM2Q8N271 834 aa22.61■■□□□ 1.21
PLOD3-216ENST00000489927 CARD11Q9BXL7 1154 aa22.61■■□□□ 1.21
PLOD3-216ENST00000489927 PPP1R1BQ9UD71 204 aaPredicted RBP22.61■■□□□ 1.21
PLOD3-216ENST00000489927 USP31Q70CQ4 1352 aa22.61■■□□□ 1.21
PLOD3-216ENST00000489927 CCDC7Q96M83 1385 aa22.61■■□□□ 1.21
PLOD3-216ENST00000489927 EXOC5O00471 708 aa22.6■■□□□ 1.21
PLOD3-216ENST00000489927 NME9Q86XW9 330 aa22.59■■□□□ 1.21
PLOD3-216ENST00000489927 TNS2Q63HR2 1409 aa22.57■■□□□ 1.2
PLOD3-216ENST00000489927 TMC1Q8TDI8 760 aa22.57■■□□□ 1.2
PLOD3-216ENST00000489927 USP54Q70EL1 1684 aa22.57■■□□□ 1.2
PLOD3-216ENST00000489927 ERBB3P21860 1342 aa22.57■■□□□ 1.2
PLOD3-216ENST00000489927 CASZ1Q86V15 1759 aa22.56■■□□□ 1.2
PLOD3-216ENST00000489927 PDGFDQ9GZP0 370 aaPredicted RBP22.56■■□□□ 1.2
PLOD3-216ENST00000489927 TXNRD1Q16881 649 aa22.55■■□□□ 1.2
PLOD3-216ENST00000489927 SLC12A5Q9H2X9 1139 aa22.55■■□□□ 1.2
PLOD3-216ENST00000489927 NINLQ9Y2I6 1382 aa22.54■■□□□ 1.2
PLOD3-216ENST00000489927 HDGFL2Q7Z4V5 671 aaPredicted RBP22.54■■□□□ 1.2
PLOD3-216ENST00000489927 NLRP2Q9NX02 1062 aa22.54■■□□□ 1.2
PLOD3-216ENST00000489927 EDC4Q6P2E9 1401 aaKnown RBP22.52■■□□□ 1.2
PLOD3-216ENST00000489927 LTN1O94822 1766 aa22.52■■□□□ 1.2
PLOD3-216ENST00000489927 A0A1W2PP64 1363 aa22.51■■□□□ 1.19
PLOD3-216ENST00000489927 ZBTB7AO95365 584 aa22.51■■□□□ 1.19
PLOD3-216ENST00000489927 NHSQ6T4R5 1651 aa22.5■■□□□ 1.19
PLOD3-216ENST00000489927 IL2RBP14784 551 aa22.5■■□□□ 1.19
PLOD3-216ENST00000489927 YY1P25490 414 aa22.5■■□□□ 1.19
PLOD3-216ENST00000489927 ANKRD24Q8TF21 1146 aa22.5■■□□□ 1.19
PLOD3-216ENST00000489927 ACSBG1Q96GR2 724 aa22.5■■□□□ 1.19
PLOD3-216ENST00000489927 STK32BQ9NY57 414 aa22.5■■□□□ 1.19
PLOD3-216ENST00000489927 TERF2IPQ9NYB0 399 aa22.5■■□□□ 1.19
PLOD3-216ENST00000489927 TONSLQ96HA7 1378 aa22.5■■□□□ 1.19
PLOD3-216ENST00000489927 SLC15A2Q16348 729 aa22.49■■□□□ 1.19
PLOD3-216ENST00000489927 PTGER2P43116 358 aa22.47■■□□□ 1.19
PLOD3-216ENST00000489927 DCAF8L1A6NGE4 600 aa22.46■■□□□ 1.19
PLOD3-216ENST00000489927 PUS7Q96PZ0 661 aaKnown RBP22.46■■□□□ 1.19
PLOD3-216ENST00000489927 ATF5Q9Y2D1 282 aaPredicted RBP22.46■■□□□ 1.19
PLOD3-216ENST00000489927 MYOM1P52179 1685 aa22.44■■□□□ 1.18
PLOD3-216ENST00000489927 IP6K1Q92551 441 aa22.43■■□□□ 1.18
PLOD3-216ENST00000489927 TESK2Q96S53 571 aa22.43■■□□□ 1.18
PLOD3-216ENST00000489927 MTFR1LQ9H019 292 aa22.41■■□□□ 1.18
PLOD3-216ENST00000489927 PAPPAQ13219 1627 aa22.41■■□□□ 1.18
PLOD3-216ENST00000489927 UTRNP46939 3433 aa22.4■■□□□ 1.18
PLOD3-216ENST00000489927 ST20-MTHFSA0A0A6YYL1 179 aa22.4■■□□□ 1.18
PLOD3-216ENST00000489927 LTV1Q96GA3 475 aaPredicted RBP22.4■■□□□ 1.18
PLOD3-216ENST00000489927 BTAF1O14981 1849 aa22.4■■□□□ 1.18
PLOD3-216ENST00000489927 DDX54Q8TDD1 881 aaKnown RBP22.38■■□□□ 1.17
PLOD3-216ENST00000489927 COG3Q96JB2 828 aa22.38■■□□□ 1.17
PLOD3-216ENST00000489927 SGIP1Q9BQI5 828 aa22.38■■□□□ 1.17
PLOD3-216ENST00000489927 FHDC1Q9C0D6 1143 aaPredicted RBP22.37■■□□□ 1.17
PLOD3-216ENST00000489927 LRRC4BQ9NT99 713 aa22.37■■□□□ 1.17
PLOD3-216ENST00000489927 FAM208AQ9UK61 1670 aaKnown RBP22.36■■□□□ 1.17
PLOD3-216ENST00000489927 MAP3K19Q56UN5 1328 aa22.36■■□□□ 1.17
PLOD3-216ENST00000489927 FBLN1P23142 703 aa22.36■■□□□ 1.17
PLOD3-216ENST00000489927 ZNF827Q17R98 1081 aa22.36■■□□□ 1.17
PLOD3-216ENST00000489927 SYT17Q9BSW7 474 aa22.36■■□□□ 1.17
PLOD3-216ENST00000489927 HOXC9P31274 260 aa22.35■■□□□ 1.17
PLOD3-216ENST00000489927 SLC24A1O60721 1099 aa22.33■■□□□ 1.17
PLOD3-216ENST00000489927 AMPHP49418 695 aa22.33■■□□□ 1.17
PLOD3-216ENST00000489927 ANKRD36BQ8N2N9 1353 aa22.32■■□□□ 1.16
PLOD3-216ENST00000489927 ARXQ96QS3 562 aa22.31■■□□□ 1.16
PLOD3-216ENST00000489927 SLC27A3Q5K4L6 730 aa22.3■■□□□ 1.16
PLOD3-216ENST00000489927 AKT1S1Q96B36 256 aa22.3■■□□□ 1.16
PLOD3-216ENST00000489927 SYTL4Q96C24 671 aaPredicted RBP22.3■■□□□ 1.16
PLOD3-216ENST00000489927 PRIM1P49642 420 aaKnown RBP22.29■■□□□ 1.16
PLOD3-216ENST00000489927 MEGF6O75095 1541 aa22.29■■□□□ 1.16
PLOD3-216ENST00000489927 KAT6BQ8WYB5 2073 aa22.28■■□□□ 1.16
PLOD3-216ENST00000489927 RRS1Q15050 365 aaKnown RBP22.28■■□□□ 1.16
PLOD3-216ENST00000489927 ZCRB1Q8TBF4 217 aaKnown RBP22.28■■□□□ 1.16
PLOD3-216ENST00000489927 RGPD2P0DJD1 1756 aa22.27■■□□□ 1.16
PLOD3-216ENST00000489927 RTL1A6NKG5 1358 aa22.27■■□□□ 1.16
PLOD3-216ENST00000489927 FYB1O15117 783 aa22.27■■□□□ 1.16
PLOD3-216ENST00000489927 KCNQ4P56696 695 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms