RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 CAMKK2Q96RR4 588 aa13.51□□□□□ -0.25
CCT3-213ENST00000489870 TERF2IPQ9NYB0 399 aa13.51□□□□□ -0.25
CCT3-213ENST00000489870 TIMELESSQ9UNS1 1208 aa13.51□□□□□ -0.25
CCT3-213ENST00000489870 BCL9O00512 1426 aa13.5□□□□□ -0.25
CCT3-213ENST00000489870 KTN1Q86UP2 1357 aaKnown RBP13.5□□□□□ -0.25
CCT3-213ENST00000489870 NINLQ9Y2I6 1382 aa13.5□□□□□ -0.25
CCT3-213ENST00000489870 WDR17Q8IZU2 1322 aa13.5□□□□□ -0.25
CCT3-213ENST00000489870 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
CCT3-213ENST00000489870 PLSCR1O15162 318 aa13.49□□□□□ -0.25
CCT3-213ENST00000489870 EN1Q05925 392 aaPredicted RBP13.49□□□□□ -0.25
CCT3-213ENST00000489870 HDGFL2Q7Z4V5 671 aaPredicted RBP13.49□□□□□ -0.25
CCT3-213ENST00000489870 CARD10Q9BWT7 1032 aa13.49□□□□□ -0.25
CCT3-213ENST00000489870 AKAP12Q02952 1782 aa13.49□□□□□ -0.25
CCT3-213ENST00000489870 PARP4Q9UKK3 1724 aaKnown RBP13.48□□□□□ -0.25
CCT3-213ENST00000489870 TRIM37O94972 964 aa13.48□□□□□ -0.25
CCT3-213ENST00000489870 APBA3O96018 575 aa13.48□□□□□ -0.25
CCT3-213ENST00000489870 DDB1Q16531 1140 aa13.48□□□□□ -0.25
CCT3-213ENST00000489870 USP35Q9P2H5 1018 aa13.48□□□□□ -0.25
CCT3-213ENST00000489870 NBPF14Q5TI25 921 aa13.47□□□□□ -0.25
CCT3-213ENST00000489870 TOM1L2Q6ZVM7 507 aa13.47□□□□□ -0.25
CCT3-213ENST00000489870 COL18A1P39060 1754 aa13.47□□□□□ -0.25
CCT3-213ENST00000489870 CCDC7Q96M83 1385 aa13.46□□□□□ -0.25
CCT3-213ENST00000489870 PIK3C2AO00443 1686 aa13.46□□□□□ -0.26
CCT3-213ENST00000489870 LRP5O75197 1615 aa13.46□□□□□ -0.26
CCT3-213ENST00000489870 CLSPNQ9HAW4 1339 aa13.45□□□□□ -0.26
CCT3-213ENST00000489870 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
CCT3-213ENST00000489870 AXIN2Q9Y2T1 843 aa13.45□□□□□ -0.26
CCT3-213ENST00000489870 OVOS2A0A0G2JMS6 1433 aa13.45□□□□□ -0.26
CCT3-213ENST00000489870 OVOS2A0A0J9YW53 1432 aa13.45□□□□□ -0.26
CCT3-213ENST00000489870 OVOS2Q6IE36 1432 aa13.45□□□□□ -0.26
CCT3-213ENST00000489870 EDC4Q6P2E9 1401 aaKnown RBP13.45□□□□□ -0.26
CCT3-213ENST00000489870 TNS1Q9HBL0 1735 aaKnown RBP13.44□□□□□ -0.26
CCT3-213ENST00000489870 USP54Q70EL1 1684 aa13.44□□□□□ -0.26
CCT3-213ENST00000489870 EXOC5O00471 708 aa13.44□□□□□ -0.26
CCT3-213ENST00000489870 CDCA8Q53HL2 280 aa13.44□□□□□ -0.26
CCT3-213ENST00000489870 FAM182BQ5T319 152 aa13.44□□□□□ -0.26
CCT3-213ENST00000489870 EZH2Q15910 746 aaKnown RBP13.43□□□□□ -0.26
CCT3-213ENST00000489870 MON2Q7Z3U7 1717 aa13.43□□□□□ -0.26
CCT3-213ENST00000489870 TESK2Q96S53 571 aa13.42□□□□□ -0.26
CCT3-213ENST00000489870 SLC12A5Q9H2X9 1139 aa13.42□□□□□ -0.26
CCT3-213ENST00000489870 RGPD3A6NKT7 1758 aaPredicted RBP13.41□□□□□ -0.26
CCT3-213ENST00000489870 RGPD4Q7Z3J3 1758 aa13.41□□□□□ -0.26
CCT3-213ENST00000489870 NFAT5O94916 1531 aa13.41□□□□□ -0.26
CCT3-213ENST00000489870 CSB-PGBD3P0DP91 1061 aa13.41□□□□□ -0.26
CCT3-213ENST00000489870 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
CCT3-213ENST00000489870 CD163L1Q9NR16 1453 aa13.4□□□□□ -0.26
CCT3-213ENST00000489870 ST20-MTHFSA0A0A6YYL1 179 aa13.39□□□□□ -0.27
CCT3-213ENST00000489870 HMGB2P26583 209 aaKnown RBP13.39□□□□□ -0.27
CCT3-213ENST00000489870 R3HDM1Q15032 1099 aaKnown RBP13.39□□□□□ -0.27
CCT3-213ENST00000489870 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
CCT3-213ENST00000489870 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
CCT3-213ENST00000489870 ERBB3P21860 1342 aa13.39□□□□□ -0.27
CCT3-213ENST00000489870 ZBTB7CA1YPR0 619 aa13.38□□□□□ -0.27
CCT3-213ENST00000489870 TMF1P82094 1093 aa13.38□□□□□ -0.27
CCT3-213ENST00000489870 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCT3-213ENST00000489870 MARCH10Q8NA82 808 aaPredicted RBP13.38□□□□□ -0.27
CCT3-213ENST00000489870 IP6K1Q92551 441 aa13.38□□□□□ -0.27
CCT3-213ENST00000489870 PSDA5PKW4 1024 aaPredicted RBP13.37□□□□□ -0.27
CCT3-213ENST00000489870 RREB1Q92766 1687 aa13.37□□□□□ -0.27
CCT3-213ENST00000489870 A0A1W2PP64 1363 aa13.36□□□□□ -0.27
CCT3-213ENST00000489870 RGPD5Q99666 1765 aa13.36□□□□□ -0.27
CCT3-213ENST00000489870 IL2RBP14784 551 aa13.36□□□□□ -0.27
CCT3-213ENST00000489870 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
CCT3-213ENST00000489870 NME9Q86XW9 330 aa13.36□□□□□ -0.27
CCT3-213ENST00000489870 COG3Q96JB2 828 aa13.36□□□□□ -0.27
CCT3-213ENST00000489870 SPON1Q9HCB6 807 aa13.35□□□□□ -0.27
CCT3-213ENST00000489870 NLRP2Q9NX02 1062 aa13.35□□□□□ -0.27
CCT3-213ENST00000489870 KAT6BQ8WYB5 2073 aa13.35□□□□□ -0.27
CCT3-213ENST00000489870 WNK3Q9BYP7 1800 aa13.34□□□□□ -0.27
CCT3-213ENST00000489870 KIF24Q5T7B8 1368 aa13.34□□□□□ -0.27
CCT3-213ENST00000489870 ANKRD36BQ8N2N9 1353 aa13.34□□□□□ -0.27
CCT3-213ENST00000489870 LRRC37A3O60309 1634 aa13.34□□□□□ -0.27
CCT3-213ENST00000489870 CGNL1Q0VF96 1302 aa13.34□□□□□ -0.27
CCT3-213ENST00000489870 ANKRD24Q8TF21 1146 aa13.33□□□□□ -0.28
CCT3-213ENST00000489870 TNS2Q63HR2 1409 aa13.32□□□□□ -0.28
CCT3-213ENST00000489870 SOX12O15370 315 aa13.32□□□□□ -0.28
CCT3-213ENST00000489870 KCNQ2O43526 872 aa13.32□□□□□ -0.28
CCT3-213ENST00000489870 FAM208AQ9UK61 1670 aaKnown RBP13.31□□□□□ -0.28
CCT3-213ENST00000489870 NUP188Q5SRE5 1749 aa13.31□□□□□ -0.28
CCT3-213ENST00000489870 LTN1O94822 1766 aa13.31□□□□□ -0.28
CCT3-213ENST00000489870 RTL1A6NKG5 1358 aa13.31□□□□□ -0.28
CCT3-213ENST00000489870 FYB1O15117 783 aa13.3□□□□□ -0.28
CCT3-213ENST00000489870 TXNRD1Q16881 649 aa13.3□□□□□ -0.28
CCT3-213ENST00000489870 PROM2Q8N271 834 aa13.3□□□□□ -0.28
CCT3-213ENST00000489870 USP47Q96K76 1375 aa13.3□□□□□ -0.28
CCT3-213ENST00000489870 AMPHP49418 695 aa13.29□□□□□ -0.28
CCT3-213ENST00000489870 HOXC9P31274 260 aa13.28□□□□□ -0.28
CCT3-213ENST00000489870 SLC15A2Q16348 729 aa13.28□□□□□ -0.28
CCT3-213ENST00000489870 SLC27A3Q5K4L6 730 aa13.28□□□□□ -0.28
CCT3-213ENST00000489870 STK32BQ9NY57 414 aa13.28□□□□□ -0.28
CCT3-213ENST00000489870 MAP3K19Q56UN5 1328 aa13.27□□□□□ -0.29
CCT3-213ENST00000489870 SLC16A10Q8TF71 515 aa13.26□□□□□ -0.29
CCT3-213ENST00000489870 NHSQ6T4R5 1651 aa13.25□□□□□ -0.29
CCT3-213ENST00000489870 ZCRB1Q8TBF4 217 aaKnown RBP13.25□□□□□ -0.29
CCT3-213ENST00000489870 PPP1R1BQ9UD71 204 aaPredicted RBP13.25□□□□□ -0.29
CCT3-213ENST00000489870 SMG6Q86US8 1419 aaKnown RBP13.24□□□□□ -0.29
CCT3-213ENST00000489870 INSRP06213 1382 aa13.24□□□□□ -0.29
CCT3-213ENST00000489870 PLEKHG2Q9H7P9 1386 aa13.23□□□□□ -0.29
CCT3-213ENST00000489870 PTF1AQ7RTS3 328 aa13.23□□□□□ -0.29
CCT3-213ENST00000489870 RAPGEF4Q8WZA2 1011 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms