RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 NBPF4Q96M43 638 aa13.56□□□□□ -0.24
ABCD4-214ENST00000489678 CFAP53Q96M91 514 aa13.56□□□□□ -0.24
ABCD4-214ENST00000489678 SPINK5Q9NQ38 1064 aaPredicted RBP13.56□□□□□ -0.24
ABCD4-214ENST00000489678 BTG4Q9NY30 223 aa13.56□□□□□ -0.24
ABCD4-214ENST00000489678 HOXC9P31274 260 aa13.56□□□□□ -0.24
ABCD4-214ENST00000489678 XIRP1Q702N8 1843 aaKnown RBP13.55□□□□□ -0.24
ABCD4-214ENST00000489678 BLMP54132 1417 aaPredicted RBP13.55□□□□□ -0.24
ABCD4-214ENST00000489678 EYA1Q99502 592 aa13.55□□□□□ -0.24
ABCD4-214ENST00000489678 TCP11L2Q8N4U5 519 aa13.55□□□□□ -0.24
ABCD4-214ENST00000489678 DAXXQ9UER7 740 aaPredicted RBP13.55□□□□□ -0.24
ABCD4-214ENST00000489678 EVA1CP58658 441 aa13.54□□□□□ -0.24
ABCD4-214ENST00000489678 MCM10Q7L590 875 aa13.54□□□□□ -0.24
ABCD4-214ENST00000489678 BCL2L13Q9BXK5 485 aa13.54□□□□□ -0.24
ABCD4-214ENST00000489678 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
ABCD4-214ENST00000489678 POLR3AO14802 1390 aaPredicted RBP13.54□□□□□ -0.24
ABCD4-214ENST00000489678 SPATA31A3Q5VYP0 1347 aa13.54□□□□□ -0.24
ABCD4-214ENST00000489678 LARP1Q6PKG0 1096 aaKnown RBP13.53□□□□□ -0.24
ABCD4-214ENST00000489678 ANKRD24Q8TF21 1146 aa13.53□□□□□ -0.24
ABCD4-214ENST00000489678 TSR2Q969E8 191 aaKnown RBP13.53□□□□□ -0.24
ABCD4-214ENST00000489678 KNDC1Q76NI1 1749 aa13.53□□□□□ -0.24
ABCD4-214ENST00000489678 TOM1L2Q6ZVM7 507 aa13.53□□□□□ -0.24
ABCD4-214ENST00000489678 NECTIN2Q92692 538 aa13.53□□□□□ -0.24
ABCD4-214ENST00000489678 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.24
ABCD4-214ENST00000489678 INSRP06213 1382 aa13.52□□□□□ -0.25
ABCD4-214ENST00000489678 FMN2Q9NZ56 1722 aa13.51□□□□□ -0.25
ABCD4-214ENST00000489678 NGLY1Q96IV0 654 aa13.51□□□□□ -0.25
ABCD4-214ENST00000489678 LTBP4Q8N2S1 1624 aa13.51□□□□□ -0.25
ABCD4-214ENST00000489678 KRT24Q2M2I5 525 aa13.5□□□□□ -0.25
ABCD4-214ENST00000489678 MEX3CQ5U5Q3 659 aaKnown RBP13.5□□□□□ -0.25
ABCD4-214ENST00000489678 IL13P35225 146 aa13.5□□□□□ -0.25
ABCD4-214ENST00000489678 MAPK8IP3Q9UPT6 1336 aa13.5□□□□□ -0.25
ABCD4-214ENST00000489678 PLIN1O60240 522 aa13.5□□□□□ -0.25
ABCD4-214ENST00000489678 RIPK4P57078 832 aa13.5□□□□□ -0.25
ABCD4-214ENST00000489678 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
ABCD4-214ENST00000489678 ARHGEF25Q86VW2 580 aa13.49□□□□□ -0.25
ABCD4-214ENST00000489678 PUS7Q96PZ0 661 aaKnown RBP13.49□□□□□ -0.25
ABCD4-214ENST00000489678 MAP2P11137 1827 aaKnown RBP13.48□□□□□ -0.25
ABCD4-214ENST00000489678 RRP1P56182 461 aaKnown RBP13.48□□□□□ -0.25
ABCD4-214ENST00000489678 PDE3BQ13370 1112 aa13.48□□□□□ -0.25
ABCD4-214ENST00000489678 MPRIPQ6WCQ1 1025 aa13.48□□□□□ -0.25
ABCD4-214ENST00000489678 RCAN3Q9UKA8 241 aa13.48□□□□□ -0.25
ABCD4-214ENST00000489678 SSH2Q76I76 1423 aa13.48□□□□□ -0.25
ABCD4-214ENST00000489678 TTC21AQ8NDW8 1320 aa13.48□□□□□ -0.25
ABCD4-214ENST00000489678 ANKARQ7Z5J8 1434 aa13.48□□□□□ -0.25
ABCD4-214ENST00000489678 NINLQ9Y2I6 1382 aa13.48□□□□□ -0.25
ABCD4-214ENST00000489678 PIK3C2AO00443 1686 aa13.48□□□□□ -0.25
ABCD4-214ENST00000489678 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
ABCD4-214ENST00000489678 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
ABCD4-214ENST00000489678 SOS2Q07890 1332 aaPredicted RBP13.47□□□□□ -0.25
ABCD4-214ENST00000489678 NPC1L1Q9UHC9 1359 aa13.47□□□□□ -0.25
ABCD4-214ENST00000489678 ITSN1Q15811 1721 aa13.47□□□□□ -0.25
ABCD4-214ENST00000489678 SYTL4Q96C24 671 aaPredicted RBP13.47□□□□□ -0.25
ABCD4-214ENST00000489678 ROBO1Q9Y6N7 1651 aa13.47□□□□□ -0.25
ABCD4-214ENST00000489678 MTHFSDQ2M296 383 aaKnown RBP13.45□□□□□ -0.26
ABCD4-214ENST00000489678 CCDC136Q96JN2 1154 aa13.45□□□□□ -0.26
ABCD4-214ENST00000489678 ADGRB2O60241 1585 aa13.45□□□□□ -0.26
ABCD4-214ENST00000489678 TNS3Q68CZ2 1445 aa13.45□□□□□ -0.26
ABCD4-214ENST00000489678 PIP4K2AP48426 406 aaPredicted RBP13.44□□□□□ -0.26
ABCD4-214ENST00000489678 IP6K1Q92551 441 aa13.44□□□□□ -0.26
ABCD4-214ENST00000489678 RSPH6AQ9H0K4 717 aa13.44□□□□□ -0.26
ABCD4-214ENST00000489678 LGR6Q9HBX8 967 aa13.44□□□□□ -0.26
ABCD4-214ENST00000489678 KCNQ4P56696 695 aa13.44□□□□□ -0.26
ABCD4-214ENST00000489678 FAM98CQ17RN3 349 aaKnown RBP13.44□□□□□ -0.26
ABCD4-214ENST00000489678 EXOC6Q8TAG9 804 aa13.44□□□□□ -0.26
ABCD4-214ENST00000489678 KCNH5Q8NCM2 988 aa13.43□□□□□ -0.26
ABCD4-214ENST00000489678 PXDNQ92626 1479 aa13.43□□□□□ -0.26
ABCD4-214ENST00000489678 MSH5O43196 834 aa13.43□□□□□ -0.26
ABCD4-214ENST00000489678 FLT4P35916 1363 aa13.43□□□□□ -0.26
ABCD4-214ENST00000489678 ACSBG1Q96GR2 724 aa13.42□□□□□ -0.26
ABCD4-214ENST00000489678 TMPOP42166 694 aaKnown RBP13.42□□□□□ -0.26
ABCD4-214ENST00000489678 NEFMP07197 916 aa13.42□□□□□ -0.26
ABCD4-214ENST00000489678 UBE2Q2Q8WVN8 375 aa13.42□□□□□ -0.26
ABCD4-214ENST00000489678 MED1Q15648 1581 aaPredicted RBP13.41□□□□□ -0.26
ABCD4-214ENST00000489678 ERBB3P21860 1342 aa13.41□□□□□ -0.26
ABCD4-214ENST00000489678 SLC39A6Q13433 755 aa13.41□□□□□ -0.26
ABCD4-214ENST00000489678 RUNDC1Q96C34 613 aa13.41□□□□□ -0.26
ABCD4-214ENST00000489678 TOPAZ1Q8N9V7 1692 aa13.41□□□□□ -0.26
ABCD4-214ENST00000489678 ZNF521Q96K83 1311 aa13.41□□□□□ -0.26
ABCD4-214ENST00000489678 WWC1Q8IX03 1113 aa13.4□□□□□ -0.26
ABCD4-214ENST00000489678 PEAK1Q9H792 1746 aa13.4□□□□□ -0.26
ABCD4-214ENST00000489678 ZNF530Q6P9A1 599 aaPredicted RBP13.4□□□□□ -0.26
ABCD4-214ENST00000489678 KCNQ3O43525 872 aa13.39□□□□□ -0.27
ABCD4-214ENST00000489678 PLEKHF1Q96S99 279 aa13.39□□□□□ -0.27
ABCD4-214ENST00000489678 SBNO1A3KN83 1393 aa13.39□□□□□ -0.27
ABCD4-214ENST00000489678 MON2Q7Z3U7 1717 aa13.39□□□□□ -0.27
ABCD4-214ENST00000489678 FANCIQ9NVI1 1328 aa13.39□□□□□ -0.27
ABCD4-214ENST00000489678 RAPGEF4Q8WZA2 1011 aa13.39□□□□□ -0.27
ABCD4-214ENST00000489678 FRAT1Q92837 279 aaPredicted RBP13.39□□□□□ -0.27
ABCD4-214ENST00000489678 RTN4Q9NQC3 1192 aaKnown RBP13.39□□□□□ -0.27
ABCD4-214ENST00000489678 TNNQ9UQP3 1299 aa13.39□□□□□ -0.27
ABCD4-214ENST00000489678 NSD2O96028 1365 aa13.39□□□□□ -0.27
ABCD4-214ENST00000489678 PTF1AQ7RTS3 328 aa13.39□□□□□ -0.27
ABCD4-214ENST00000489678 CLUAP1Q96AJ1 413 aa13.39□□□□□ -0.27
ABCD4-214ENST00000489678 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
ABCD4-214ENST00000489678 AKAP12Q02952 1782 aa13.39□□□□□ -0.27
ABCD4-214ENST00000489678 KIF20BQ96Q89 1820 aa13.38□□□□□ -0.27
ABCD4-214ENST00000489678 ANXA1P04083 346 aa13.38□□□□□ -0.27
ABCD4-214ENST00000489678 PNPLA6Q8IY17 1366 aa13.38□□□□□ -0.27
ABCD4-214ENST00000489678 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
ABCD4-214ENST00000489678 SMIM5Q71RC9 77 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 186.8 ms