RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 TXNDC2Q86VQ3 553 aa13.46□□□□□ -0.25
TNRC6B-208ENST00000489500 KDM5AP29375 1690 aaKnown RBP13.46□□□□□ -0.26
TNRC6B-208ENST00000489500 ANKRD50Q9ULJ7 1429 aa13.46□□□□□ -0.26
TNRC6B-208ENST00000489500 SEMA3EO15041 775 aa13.45□□□□□ -0.26
TNRC6B-208ENST00000489500 HDGFP51858 240 aaKnown RBP13.45□□□□□ -0.26
TNRC6B-208ENST00000489500 SCAF11Q99590 1463 aaKnown RBP13.44□□□□□ -0.26
TNRC6B-208ENST00000489500 SLC52A1Q9NWF4 448 aa13.44□□□□□ -0.26
TNRC6B-208ENST00000489500 PIK3C2BO00750 1634 aa13.43□□□□□ -0.26
TNRC6B-208ENST00000489500 KCNC4Q03721 635 aa13.43□□□□□ -0.26
TNRC6B-208ENST00000489500 PTGDRQ13258 359 aa13.43□□□□□ -0.26
TNRC6B-208ENST00000489500 VWDEQ8N2E2 1590 aa13.43□□□□□ -0.26
TNRC6B-208ENST00000489500 SLIT1O75093 1534 aa13.43□□□□□ -0.26
TNRC6B-208ENST00000489500 DISP3Q9P2K9 1392 aa13.43□□□□□ -0.26
TNRC6B-208ENST00000489500 RPRD2Q5VT52 1461 aaKnown RBP13.42□□□□□ -0.26
TNRC6B-208ENST00000489500 EFCAB6Q5THR3 1501 aa13.42□□□□□ -0.26
TNRC6B-208ENST00000489500 SYNMO15061 1565 aa13.41□□□□□ -0.26
TNRC6B-208ENST00000489500 TET3O43151 1660 aa13.41□□□□□ -0.26
TNRC6B-208ENST00000489500 GCC2Q8IWJ2 1684 aa13.41□□□□□ -0.26
TNRC6B-208ENST00000489500 EYA1Q99502 592 aa13.41□□□□□ -0.26
TNRC6B-208ENST00000489500 ROCK1Q13464 1354 aa13.41□□□□□ -0.26
TNRC6B-208ENST00000489500 NUTM2FA1L443 756 aa13.4□□□□□ -0.26
TNRC6B-208ENST00000489500 RNF40O75150 1001 aa13.4□□□□□ -0.26
TNRC6B-208ENST00000489500 PIP4K2BP78356 416 aa13.4□□□□□ -0.26
TNRC6B-208ENST00000489500 IDI1Q13907 227 aa13.4□□□□□ -0.26
TNRC6B-208ENST00000489500 SWT1Q5T5J6 900 aaKnown RBP13.4□□□□□ -0.26
TNRC6B-208ENST00000489500 BCANQ96GW7 911 aa13.4□□□□□ -0.26
TNRC6B-208ENST00000489500 TMEM2Q9UHN6 1383 aa13.4□□□□□ -0.26
TNRC6B-208ENST00000489500 ARHGAP23Q9P227 1491 aa13.4□□□□□ -0.26
TNRC6B-208ENST00000489500 RGS20O76081 388 aa13.39□□□□□ -0.27
TNRC6B-208ENST00000489500 ITGAEP38570 1179 aa13.38□□□□□ -0.27
TNRC6B-208ENST00000489500 NOS1P29475 1434 aa13.38□□□□□ -0.27
TNRC6B-208ENST00000489500 UNC13BO14795 1591 aa13.37□□□□□ -0.27
TNRC6B-208ENST00000489500 LTKP29376 864 aa13.37□□□□□ -0.27
TNRC6B-208ENST00000489500 ADGRB3O60242 1522 aa13.37□□□□□ -0.27
TNRC6B-208ENST00000489500 PPP1R15AO75807 674 aaPredicted RBP13.36□□□□□ -0.27
TNRC6B-208ENST00000489500 TJAP1Q5JTD0 557 aa13.36□□□□□ -0.27
TNRC6B-208ENST00000489500 APLP1P51693 650 aa13.35□□□□□ -0.27
TNRC6B-208ENST00000489500 HAP1P54257 671 aaPredicted RBP13.35□□□□□ -0.27
TNRC6B-208ENST00000489500 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.35□□□□□ -0.27
TNRC6B-208ENST00000489500 STRCP1A6NGW2 1772 aa13.35□□□□□ -0.27
TNRC6B-208ENST00000489500 LRRC7Q96NW7 1537 aa13.34□□□□□ -0.27
TNRC6B-208ENST00000489500 IQGAP3Q86VI3 1631 aa13.33□□□□□ -0.28
TNRC6B-208ENST00000489500 FAM161AQ3B820 660 aa13.33□□□□□ -0.28
TNRC6B-208ENST00000489500 PPARGC1BQ86YN6 1023 aaKnown RBP13.33□□□□□ -0.28
TNRC6B-208ENST00000489500 MYO5BQ9ULV0 1848 aa13.33□□□□□ -0.28
TNRC6B-208ENST00000489500 NUP155O75694 1391 aa13.32□□□□□ -0.28
TNRC6B-208ENST00000489500 KCNA6P17658 529 aa13.32□□□□□ -0.28
TNRC6B-208ENST00000489500 MTRQ99707 1265 aa13.32□□□□□ -0.28
TNRC6B-208ENST00000489500 ADGRG1Q9Y653 693 aa13.32□□□□□ -0.28
TNRC6B-208ENST00000489500 E9PCH4 1651 aa13.31□□□□□ -0.28
TNRC6B-208ENST00000489500 TESPA1A2RU30 521 aaPredicted RBP13.31□□□□□ -0.28
TNRC6B-208ENST00000489500 HSPA1LP34931 641 aa13.31□□□□□ -0.28
TNRC6B-208ENST00000489500 PROSER2Q86WR7 435 aaPredicted RBP13.3□□□□□ -0.28
TNRC6B-208ENST00000489500 SLC26A8Q96RN1 970 aa13.3□□□□□ -0.28
TNRC6B-208ENST00000489500 KDM2AQ9Y2K7 1162 aa13.3□□□□□ -0.28
TNRC6B-208ENST00000489500 FCHSD2O94868 740 aa13.29□□□□□ -0.28
TNRC6B-208ENST00000489500 RBM26Q5T8P6 1007 aaKnown RBP13.29□□□□□ -0.28
TNRC6B-208ENST00000489500 SLF2Q8IX21 1173 aa13.29□□□□□ -0.28
TNRC6B-208ENST00000489500 ZNF516Q92618 1163 aa13.29□□□□□ -0.28
TNRC6B-208ENST00000489500 RIMS2Q9UQ26 1411 aa13.29□□□□□ -0.28
TNRC6B-208ENST00000489500 TMEM131LA2VDJ0 1609 aa13.28□□□□□ -0.28
TNRC6B-208ENST00000489500 IL21Q9HBE4 155 aa13.28□□□□□ -0.28
TNRC6B-208ENST00000489500 PLEKHG1Q9ULL1 1385 aa13.28□□□□□ -0.28
TNRC6B-208ENST00000489500 XIRP1Q702N8 1843 aaKnown RBP13.27□□□□□ -0.28
TNRC6B-208ENST00000489500 RBM46Q8TBY0 533 aaKnown RBP13.27□□□□□ -0.29
TNRC6B-208ENST00000489500 CHD2O14647 1828 aaKnown RBP13.26□□□□□ -0.29
TNRC6B-208ENST00000489500 NKTRP30414 1462 aaKnown RBP13.26□□□□□ -0.29
TNRC6B-208ENST00000489500 SPHKAPQ2M3C7 1700 aa13.26□□□□□ -0.29
TNRC6B-208ENST00000489500 RRBP1Q9P2E9 1410 aaKnown RBP13.25□□□□□ -0.29
TNRC6B-208ENST00000489500 MSH6P52701 1360 aa13.25□□□□□ -0.29
TNRC6B-208ENST00000489500 DNAJB2P25686 324 aa13.25□□□□□ -0.29
TNRC6B-208ENST00000489500 TBX22Q9Y458 520 aa13.25□□□□□ -0.29
TNRC6B-208ENST00000489500 ZFYVE9O95405 1425 aa13.24□□□□□ -0.29
TNRC6B-208ENST00000489500 TMEM94Q12767 1356 aa13.24□□□□□ -0.29
TNRC6B-208ENST00000489500 RCCD1A6NED2 376 aa13.24□□□□□ -0.29
TNRC6B-208ENST00000489500 SOCS7O14512 581 aa13.24□□□□□ -0.29
TNRC6B-208ENST00000489500 ZNF326Q5BKZ1 582 aaKnown RBP13.24□□□□□ -0.29
TNRC6B-208ENST00000489500 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
TNRC6B-208ENST00000489500 KIF1BO60333 1816 aa13.23□□□□□ -0.29
TNRC6B-208ENST00000489500 C14orf37Q86TY3 774 aa13.23□□□□□ -0.29
TNRC6B-208ENST00000489500 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
TNRC6B-208ENST00000489500 IRX2Q9BZI1 471 aaPredicted RBP13.23□□□□□ -0.29
TNRC6B-208ENST00000489500 TMEM134Q9H6X4 195 aa13.23□□□□□ -0.29
TNRC6B-208ENST00000489500 NWD1Q149M9 1564 aa13.23□□□□□ -0.29
TNRC6B-208ENST00000489500 PIK3R4Q99570 1358 aa13.22□□□□□ -0.29
TNRC6B-208ENST00000489500 COPS2P61201 443 aa13.22□□□□□ -0.29
TNRC6B-208ENST00000489500 NKX2-3Q8TAU0 364 aa13.22□□□□□ -0.29
TNRC6B-208ENST00000489500 NECTIN2Q92692 538 aa13.22□□□□□ -0.29
TNRC6B-208ENST00000489500 MED1Q15648 1581 aaPredicted RBP13.22□□□□□ -0.29
TNRC6B-208ENST00000489500 ILDR2Q71H61 639 aa13.21□□□□□ -0.29
TNRC6B-208ENST00000489500 FAM135BQ49AJ0 1406 aa13.21□□□□□ -0.3
TNRC6B-208ENST00000489500 NCOA3Q9Y6Q9 1424 aa13.21□□□□□ -0.3
TNRC6B-208ENST00000489500 ALKQ9UM73 1620 aa13.21□□□□□ -0.3
TNRC6B-208ENST00000489500 ACIN1Q9UKV3 1341 aaKnown RBP13.2□□□□□ -0.3
TNRC6B-208ENST00000489500 TRPM2O94759 1503 aa13.2□□□□□ -0.3
TNRC6B-208ENST00000489500 FECHP22830 423 aa13.2□□□□□ -0.3
TNRC6B-208ENST00000489500 SLC4A3P48751 1232 aa13.2□□□□□ -0.3
TNRC6B-208ENST00000489500 SMYD5Q6GMV2 418 aa13.2□□□□□ -0.3
TNRC6B-208ENST00000489500 NUTM2DQ5VT03 806 aaPredicted RBP13.19□□□□□ -0.3
TNRC6B-208ENST00000489500 HIC1Q14526 733 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms