RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
SNX17-207ENST00000489402 WNK3Q9BYP7 1800 aa13.4□□□□□ -0.26
SNX17-207ENST00000489402 RGPD5Q99666 1765 aa13.4□□□□□ -0.26
SNX17-207ENST00000489402 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
SNX17-207ENST00000489402 DDB1Q16531 1140 aa13.39□□□□□ -0.27
SNX17-207ENST00000489402 KCNH5Q8NCM2 988 aa13.39□□□□□ -0.27
SNX17-207ENST00000489402 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
SNX17-207ENST00000489402 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
SNX17-207ENST00000489402 RGPD3A6NKT7 1758 aaPredicted RBP13.38□□□□□ -0.27
SNX17-207ENST00000489402 RGPD4Q7Z3J3 1758 aa13.38□□□□□ -0.27
SNX17-207ENST00000489402 SBF2Q86WG5 1849 aa13.38□□□□□ -0.27
SNX17-207ENST00000489402 TTC21BQ7Z4L5 1316 aa13.38□□□□□ -0.27
SNX17-207ENST00000489402 WDR17Q8IZU2 1322 aa13.38□□□□□ -0.27
SNX17-207ENST00000489402 SOX12O15370 315 aa13.37□□□□□ -0.27
SNX17-207ENST00000489402 CDCA7Q9BWT1 371 aaPredicted RBP13.37□□□□□ -0.27
SNX17-207ENST00000489402 CSB-PGBD3P0DP91 1061 aa13.36□□□□□ -0.27
SNX17-207ENST00000489402 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
SNX17-207ENST00000489402 ARHGEF25Q86VW2 580 aa13.35□□□□□ -0.27
SNX17-207ENST00000489402 MON2Q7Z3U7 1717 aa13.35□□□□□ -0.27
SNX17-207ENST00000489402 ABCC6O95255 1503 aa13.34□□□□□ -0.27
SNX17-207ENST00000489402 NFAT5O94916 1531 aa13.34□□□□□ -0.27
SNX17-207ENST00000489402 PLSCR1O15162 318 aa13.33□□□□□ -0.28
SNX17-207ENST00000489402 CARD10Q9BWT7 1032 aa13.33□□□□□ -0.28
SNX17-207ENST00000489402 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
SNX17-207ENST00000489402 PDGFDQ9GZP0 370 aaPredicted RBP13.33□□□□□ -0.28
SNX17-207ENST00000489402 SPON1Q9HCB6 807 aa13.33□□□□□ -0.28
SNX17-207ENST00000489402 PPP1R1BQ9UD71 204 aaPredicted RBP13.33□□□□□ -0.28
SNX17-207ENST00000489402 CCDC7Q96M83 1385 aa13.32□□□□□ -0.28
SNX17-207ENST00000489402 SBNO2Q9Y2G9 1366 aa13.32□□□□□ -0.28
SNX17-207ENST00000489402 MARCH10Q8NA82 808 aaPredicted RBP13.32□□□□□ -0.28
SNX17-207ENST00000489402 BCL9O00512 1426 aa13.31□□□□□ -0.28
SNX17-207ENST00000489402 CD163L1Q9NR16 1453 aa13.31□□□□□ -0.28
SNX17-207ENST00000489402 KCNQ2O43526 872 aa13.31□□□□□ -0.28
SNX17-207ENST00000489402 PROM2Q8N271 834 aa13.31□□□□□ -0.28
SNX17-207ENST00000489402 USP54Q70EL1 1684 aa13.31□□□□□ -0.28
SNX17-207ENST00000489402 EXOC5O00471 708 aa13.3□□□□□ -0.28
SNX17-207ENST00000489402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNX17-207ENST00000489402 CARD11Q9BXL7 1154 aa13.3□□□□□ -0.28
SNX17-207ENST00000489402 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
SNX17-207ENST00000489402 LTN1O94822 1766 aa13.3□□□□□ -0.28
SNX17-207ENST00000489402 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
SNX17-207ENST00000489402 HDGFL2Q7Z4V5 671 aaPredicted RBP13.29□□□□□ -0.28
SNX17-207ENST00000489402 NME9Q86XW9 330 aa13.29□□□□□ -0.28
SNX17-207ENST00000489402 TMC1Q8TDI8 760 aa13.29□□□□□ -0.28
SNX17-207ENST00000489402 USP31Q70CQ4 1352 aa13.29□□□□□ -0.28
SNX17-207ENST00000489402 TNS2Q63HR2 1409 aa13.29□□□□□ -0.28
SNX17-207ENST00000489402 CASZ1Q86V15 1759 aa13.28□□□□□ -0.28
SNX17-207ENST00000489402 NINLQ9Y2I6 1382 aa13.28□□□□□ -0.28
SNX17-207ENST00000489402 SLC12A5Q9H2X9 1139 aa13.27□□□□□ -0.29
SNX17-207ENST00000489402 TONSLQ96HA7 1378 aa13.27□□□□□ -0.29
SNX17-207ENST00000489402 ERBB3P21860 1342 aa13.26□□□□□ -0.29
SNX17-207ENST00000489402 FBLN1P23142 703 aa13.26□□□□□ -0.29
SNX17-207ENST00000489402 UTRNP46939 3433 aa13.26□□□□□ -0.29
SNX17-207ENST00000489402 EDC4Q6P2E9 1401 aaKnown RBP13.26□□□□□ -0.29
SNX17-207ENST00000489402 NHSQ6T4R5 1651 aa13.26□□□□□ -0.29
SNX17-207ENST00000489402 NLRP2Q9NX02 1062 aa13.26□□□□□ -0.29
SNX17-207ENST00000489402 TERF2IPQ9NYB0 399 aa13.26□□□□□ -0.29
SNX17-207ENST00000489402 TXNRD1Q16881 649 aa13.25□□□□□ -0.29
SNX17-207ENST00000489402 STK32BQ9NY57 414 aa13.25□□□□□ -0.29
SNX17-207ENST00000489402 IL2RBP14784 551 aa13.24□□□□□ -0.29
SNX17-207ENST00000489402 YY1P25490 414 aa13.24□□□□□ -0.29
SNX17-207ENST00000489402 A0A1W2PP64 1363 aa13.23□□□□□ -0.29
SNX17-207ENST00000489402 ANKRD24Q8TF21 1146 aa13.23□□□□□ -0.29
SNX17-207ENST00000489402 FAM208AQ9UK61 1670 aaKnown RBP13.22□□□□□ -0.29
SNX17-207ENST00000489402 ZBTB7AO95365 584 aa13.22□□□□□ -0.29
SNX17-207ENST00000489402 SLC15A2Q16348 729 aa13.22□□□□□ -0.29
SNX17-207ENST00000489402 ACSBG1Q96GR2 724 aa13.22□□□□□ -0.29
SNX17-207ENST00000489402 PUS7Q96PZ0 661 aaKnown RBP13.22□□□□□ -0.29
SNX17-207ENST00000489402 MYOM1P52179 1685 aa13.21□□□□□ -0.29
SNX17-207ENST00000489402 BTAF1O14981 1849 aa13.21□□□□□ -0.29
SNX17-207ENST00000489402 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
SNX17-207ENST00000489402 TESK2Q96S53 571 aa13.2□□□□□ -0.3
SNX17-207ENST00000489402 KAT6BQ8WYB5 2073 aa13.2□□□□□ -0.3
SNX17-207ENST00000489402 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
SNX17-207ENST00000489402 RGPD2P0DJD1 1756 aa13.18□□□□□ -0.3
SNX17-207ENST00000489402 ST20-MTHFSA0A0A6YYL1 179 aa13.18□□□□□ -0.3
SNX17-207ENST00000489402 PTGER2P43116 358 aa13.18□□□□□ -0.3
SNX17-207ENST00000489402 IP6K1Q92551 441 aa13.18□□□□□ -0.3
SNX17-207ENST00000489402 COG3Q96JB2 828 aa13.18□□□□□ -0.3
SNX17-207ENST00000489402 MTFR1LQ9H019 292 aa13.18□□□□□ -0.3
SNX17-207ENST00000489402 PAPPAQ13219 1627 aa13.17□□□□□ -0.3
SNX17-207ENST00000489402 LTV1Q96GA3 475 aaPredicted RBP13.17□□□□□ -0.3
SNX17-207ENST00000489402 DDX54Q8TDD1 881 aaKnown RBP13.16□□□□□ -0.3
SNX17-207ENST00000489402 GOLGB1Q14789 3259 aaKnown RBP13.15□□□□□ -0.3
SNX17-207ENST00000489402 AMPHP49418 695 aa13.15□□□□□ -0.3
SNX17-207ENST00000489402 KCNQ4P56696 695 aa13.15□□□□□ -0.3
SNX17-207ENST00000489402 FHDC1Q9C0D6 1143 aaPredicted RBP13.15□□□□□ -0.3
SNX17-207ENST00000489402 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
SNX17-207ENST00000489402 MAP3K19Q56UN5 1328 aa13.14□□□□□ -0.31
SNX17-207ENST00000489402 ZNF827Q17R98 1081 aa13.14□□□□□ -0.31
SNX17-207ENST00000489402 ANKRD36BQ8N2N9 1353 aa13.14□□□□□ -0.31
SNX17-207ENST00000489402 DOT1LQ8TEK3 1739 aa13.13□□□□□ -0.31
SNX17-207ENST00000489402 RTL1A6NKG5 1358 aa13.13□□□□□ -0.31
SNX17-207ENST00000489402 HOXC9P31274 260 aa13.13□□□□□ -0.31
SNX17-207ENST00000489402 SLC27A3Q5K4L6 730 aa13.13□□□□□ -0.31
SNX17-207ENST00000489402 SYT17Q9BSW7 474 aa13.13□□□□□ -0.31
SNX17-207ENST00000489402 QSER1Q2KHR3 1735 aa13.13□□□□□ -0.31
SNX17-207ENST00000489402 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
SNX17-207ENST00000489402 TMF1P82094 1093 aa13.12□□□□□ -0.31
SNX17-207ENST00000489402 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms