RNA–Protein interactions for RNA: ENST00000488866.1

PPM1B-211, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 3

Gene PPM1B, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-211ENST00000488866 GPKOWQ92917 476 aaPredicted RBP eCLIP13.39□□□□□ -0.27
PPM1B-211ENST00000488866 TTLL8A6PVC2 850 aa13.38□□□□□ -0.27
PPM1B-211ENST00000488866 PTSQ03393 145 aa13.37□□□□□ -0.27
PPM1B-211ENST00000488866 Q6ZVU0 165 aa13.37□□□□□ -0.27
PPM1B-211ENST00000488866 FIGNL2A6NMB9 653 aa13.36□□□□□ -0.27
PPM1B-211ENST00000488866 GSK3AP49840 483 aa13.36□□□□□ -0.27
PPM1B-211ENST00000488866 RSPH6AQ9H0K4 717 aa13.36□□□□□ -0.27
PPM1B-211ENST00000488866 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.35□□□□□ -0.27
PPM1B-211ENST00000488866 PDXDC2PQ6P474 469 aa13.35□□□□□ -0.27
PPM1B-211ENST00000488866 OCSTAMPQ9BR26 566 aa13.35□□□□□ -0.27
PPM1B-211ENST00000488866 ARHGAP9Q9BRR9 750 aa13.34□□□□□ -0.27
PPM1B-211ENST00000488866 SPINT1O43278 529 aa13.33□□□□□ -0.28
PPM1B-211ENST00000488866 KCTD15Q96SI1 283 aaPredicted RBP13.33□□□□□ -0.28
PPM1B-211ENST00000488866 FKBPLQ9UIM3 349 aa13.33□□□□□ -0.28
PPM1B-211ENST00000488866 NR6A1Q15406 480 aa13.32□□□□□ -0.28
PPM1B-211ENST00000488866 CNTNAP3BQ96NU0 1288 aa13.32□□□□□ -0.28
PPM1B-211ENST00000488866 CNTNAP3Q9BZ76 1288 aa13.32□□□□□ -0.28
PPM1B-211ENST00000488866 AGBL1Q96MI9 1066 aa13.31□□□□□ -0.28
PPM1B-211ENST00000488866 PGPEP1Q9NXJ5 209 aa13.31□□□□□ -0.28
PPM1B-211ENST00000488866 PROCA1Q8NCQ7 364 aaPredicted RBP13.3□□□□□ -0.28
PPM1B-211ENST00000488866 INTS6LQ5JSJ4 861 aaKnown RBP13.29□□□□□ -0.28
PPM1B-211ENST00000488866 CCDC155Q8N6L0 562 aa13.29□□□□□ -0.28
PPM1B-211ENST00000488866 SLC10A4Q96EP9 437 aa13.29□□□□□ -0.28
PPM1B-211ENST00000488866 CTSOP43234 321 aaPredicted RBP13.28□□□□□ -0.28
PPM1B-211ENST00000488866 RNFT1Q5M7Z0 435 aa13.28□□□□□ -0.28
PPM1B-211ENST00000488866 KCNMA1Q12791 1236 aa13.27□□□□□ -0.29
PPM1B-211ENST00000488866 NANOS1Q8WY41 292 aaKnown RBP13.27□□□□□ -0.29
PPM1B-211ENST00000488866 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.29
PPM1B-211ENST00000488866 COL25A1Q9BXS0 654 aaPredicted RBP13.27□□□□□ -0.29
PPM1B-211ENST00000488866 SLC35F4A4IF30 521 aa13.26□□□□□ -0.29
PPM1B-211ENST00000488866 SKIV2LQ15477 1246 aaKnown RBP13.26□□□□□ -0.29
PPM1B-211ENST00000488866 ZBTB33Q86T24 672 aa13.26□□□□□ -0.29
PPM1B-211ENST00000488866 EPS8L1Q8TE68 723 aa13.26□□□□□ -0.29
PPM1B-211ENST00000488866 INSM2Q96T92 566 aaPredicted RBP13.25□□□□□ -0.29
PPM1B-211ENST00000488866 RELBQ01201 579 aa13.24□□□□□ -0.29
PPM1B-211ENST00000488866 GPBP1L1Q9HC44 474 aaPredicted RBP13.24□□□□□ -0.29
PPM1B-211ENST00000488866 CDV3Q9UKY7 258 aaKnown RBP13.24□□□□□ -0.29
PPM1B-211ENST00000488866 ZC3H4Q9UPT8 1303 aaKnown RBP13.23□□□□□ -0.29
PPM1B-211ENST00000488866 LOC100996750A0A140TA64 210 aa13.23□□□□□ -0.29
PPM1B-211ENST00000488866 PPP2R2DQ66LE6 453 aa13.23□□□□□ -0.29
PPM1B-211ENST00000488866 ADAM32Q8TC27 787 aa13.23□□□□□ -0.29
PPM1B-211ENST00000488866 KRTAP4-6Q9BYQ5 205 aa13.23□□□□□ -0.29
PPM1B-211ENST00000488866 TMPRSS4Q9NRS4 437 aa13.23□□□□□ -0.29
PPM1B-211ENST00000488866 DHX9Q08211 1270 aaKnown RBP13.22□□□□□ -0.29
PPM1B-211ENST00000488866 SH3D19Q5HYK7 790 aa13.22□□□□□ -0.29
PPM1B-211ENST00000488866 KCTD17Q8N5Z5 321 aa13.22□□□□□ -0.29
PPM1B-211ENST00000488866 ZNF385CQ66K41 422 aaPredicted RBP13.21□□□□□ -0.29
PPM1B-211ENST00000488866 FAM117AQ9C073 453 aa13.21□□□□□ -0.29
PPM1B-211ENST00000488866 HMX1Q9NP08 348 aaPredicted RBP13.21□□□□□ -0.29
PPM1B-211ENST00000488866 ADAMTS8Q9UP79 889 aa13.21□□□□□ -0.29
PPM1B-211ENST00000488866 ITGA6P23229 1130 aa13.2□□□□□ -0.3
PPM1B-211ENST00000488866 PTK2Q05397 1052 aa13.2□□□□□ -0.3
PPM1B-211ENST00000488866 VWA5B2Q8N398 1253 aa13.2□□□□□ -0.3
PPM1B-211ENST00000488866 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
PPM1B-211ENST00000488866 ZNF395Q9H8N7 513 aaPredicted RBP13.2□□□□□ -0.3
PPM1B-211ENST00000488866 SENP3-EIF4A1A0A087X0R7 540 aa13.19□□□□□ -0.3
PPM1B-211ENST00000488866 AP1G2O75843 785 aa13.19□□□□□ -0.3
PPM1B-211ENST00000488866 RNF217Q8TC41 542 aa13.19□□□□□ -0.3
PPM1B-211ENST00000488866 KDM4CQ9H3R0 1056 aa13.19□□□□□ -0.3
PPM1B-211ENST00000488866 ADD1P35611 737 aaKnown RBP13.18□□□□□ -0.3
PPM1B-211ENST00000488866 KDF1Q8NAX2 398 aaPredicted RBP13.18□□□□□ -0.3
PPM1B-211ENST00000488866 ZNF784Q8NCA9 323 aaPredicted RBP13.18□□□□□ -0.3
PPM1B-211ENST00000488866 POLMQ9NP87 494 aaPredicted RBP13.17□□□□□ -0.3
PPM1B-211ENST00000488866 GPSM3Q9Y4H4 160 aa13.17□□□□□ -0.3
PPM1B-211ENST00000488866 LILRA1O75019 489 aa13.16□□□□□ -0.3
PPM1B-211ENST00000488866 RAB15P59190 212 aa13.16□□□□□ -0.3
PPM1B-211ENST00000488866 CDC14CA4D256 554 aa13.15□□□□□ -0.3
PPM1B-211ENST00000488866 RASSF7Q02833 373 aa13.15□□□□□ -0.3
PPM1B-211ENST00000488866 FOXD4L5Q5VV16 416 aaPredicted RBP13.15□□□□□ -0.3
PPM1B-211ENST00000488866 ERVH48-1M5A8F1 160 aa13.13□□□□□ -0.31
PPM1B-211ENST00000488866 ADH1AP07327 375 aa13.13□□□□□ -0.31
PPM1B-211ENST00000488866 SLURP2P0DP57 97 aa13.13□□□□□ -0.31
PPM1B-211ENST00000488866 SUZ12Q15022 739 aaKnown RBP13.13□□□□□ -0.31
PPM1B-211ENST00000488866 GDF11O95390 407 aa13.12□□□□□ -0.31
PPM1B-211ENST00000488866 USP17L8P0C7I0 530 aa13.12□□□□□ -0.31
PPM1B-211ENST00000488866 NBPF20Q3BBV1 942 aa13.12□□□□□ -0.31
PPM1B-211ENST00000488866 SV2AQ7L0J3 742 aa13.12□□□□□ -0.31
PPM1B-211ENST00000488866 TMEM151AQ8N4L1 468 aa13.12□□□□□ -0.31
PPM1B-211ENST00000488866 SVOPQ8N4V2 548 aa13.12□□□□□ -0.31
PPM1B-211ENST00000488866 ARHGEF15O94989 841 aa13.11□□□□□ -0.31
PPM1B-211ENST00000488866 CUEDC1Q9NWM3 386 aaPredicted RBP13.11□□□□□ -0.31
PPM1B-211ENST00000488866 ATP1B4Q9UN42 357 aaPredicted RBP13.11□□□□□ -0.31
PPM1B-211ENST00000488866 ESPNB1AK53 854 aa13.1□□□□□ -0.31
PPM1B-211ENST00000488866 DDRGK1Q96HY6 314 aa13.1□□□□□ -0.31
PPM1B-211ENST00000488866 PTGIRP43119 386 aa13.09□□□□□ -0.31
PPM1B-211ENST00000488866 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
PPM1B-211ENST00000488866 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
PPM1B-211ENST00000488866 GAS6Q14393 721 aa13.05□□□□□ -0.32
PPM1B-211ENST00000488866 RNF225M0QZC1 329 aaPredicted RBP13.04□□□□□ -0.32
PPM1B-211ENST00000488866 RFC5P40937 340 aa13.04□□□□□ -0.32
PPM1B-211ENST00000488866 CYLDQ9NQC7 956 aa13.04□□□□□ -0.32
PPM1B-211ENST00000488866 ADAMTS2O95450 1211 aa13.03□□□□□ -0.32
PPM1B-211ENST00000488866 LYPD4Q6UWN0 246 aa13.03□□□□□ -0.32
PPM1B-211ENST00000488866 LYSMD3Q7Z3D4 306 aa13.02□□□□□ -0.33
PPM1B-211ENST00000488866 RHOQP17081 205 aa13.01□□□□□ -0.33
PPM1B-211ENST00000488866 IRS1P35568 1242 aa13.01□□□□□ -0.33
PPM1B-211ENST00000488866 PRICKLE2Q7Z3G6 844 aa13.01□□□□□ -0.33
PPM1B-211ENST00000488866 PNMA1Q8ND90 353 aa13□□□□□ -0.33
PPM1B-211ENST00000488866 RNF144AP50876 292 aaPredicted RBP12.98□□□□□ -0.33
PPM1B-211ENST00000488866 GIGYF1O75420 1035 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms