RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 HMGN5P82970 282 aaKnown RBP19.75■□□□□ 0.75
MCF2L-229ENST00000488765 SLC12A5Q9H2X9 1139 aa19.75■□□□□ 0.75
MCF2L-229ENST00000488765 CD109Q6YHK3 1445 aa19.75■□□□□ 0.75
MCF2L-229ENST00000488765 SMARCA5O60264 1052 aaPredicted RBP19.74■□□□□ 0.75
MCF2L-229ENST00000488765 GADD45BO75293 160 aaPredicted RBP19.74■□□□□ 0.75
MCF2L-229ENST00000488765 PIBF1Q8WXW3 757 aa19.74■□□□□ 0.75
MCF2L-229ENST00000488765 CHMP4CQ96CF2 233 aa19.74■□□□□ 0.75
MCF2L-229ENST00000488765 CARD14Q9BXL6 1004 aa19.74■□□□□ 0.75
MCF2L-229ENST00000488765 NUCB1Q02818 461 aa19.74■□□□□ 0.75
MCF2L-229ENST00000488765 PRIMPOLQ96LW4 560 aa19.74■□□□□ 0.75
MCF2L-229ENST00000488765 NPHP1O15259 732 aa19.74■□□□□ 0.75
MCF2L-229ENST00000488765 IBTKQ9P2D0 1353 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-229ENST00000488765 U2AF1L5P0DN76 240 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-229ENST00000488765 U2AF1Q01081 240 aaKnown RBP eCLIP19.73■□□□□ 0.75
MCF2L-229ENST00000488765 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.73■□□□□ 0.75
MCF2L-229ENST00000488765 V9GYY5 206 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-229ENST00000488765 HCLS1P14317 486 aaPredicted RBP19.73■□□□□ 0.75
MCF2L-229ENST00000488765 FAM69CQ0P6D2 419 aa19.73■□□□□ 0.75
MCF2L-229ENST00000488765 ELL2O00472 640 aaPredicted RBP19.72■□□□□ 0.75
MCF2L-229ENST00000488765 PYCARDQ9ULZ3 195 aa19.72■□□□□ 0.75
MCF2L-229ENST00000488765 KDM5DQ9BY66 1539 aa19.72■□□□□ 0.75
MCF2L-229ENST00000488765 SHROOM2Q13796 1616 aa19.72■□□□□ 0.75
MCF2L-229ENST00000488765 C16orf71Q8IYS4 520 aaPredicted RBP19.72■□□□□ 0.75
MCF2L-229ENST00000488765 DDX19BQ9UMR2 479 aa19.72■□□□□ 0.75
MCF2L-229ENST00000488765 HDAC1Q13547 482 aaPredicted RBP19.72■□□□□ 0.75
MCF2L-229ENST00000488765 ATF7IPQ6VMQ6 1270 aa19.7■□□□□ 0.74
MCF2L-229ENST00000488765 RUNDC1Q96C34 613 aa19.7■□□□□ 0.74
MCF2L-229ENST00000488765 MORC1Q86VD1 984 aa19.7■□□□□ 0.74
MCF2L-229ENST00000488765 ST7Q9NRC1 585 aa19.7■□□□□ 0.74
MCF2L-229ENST00000488765 CLASP1Q7Z460 1538 aa19.69■□□□□ 0.74
MCF2L-229ENST00000488765 TRIM6-TRIM34B2RNG4 842 aa19.69■□□□□ 0.74
MCF2L-229ENST00000488765 U2SURPO15042 1029 aaKnown RBP19.69■□□□□ 0.74
MCF2L-229ENST00000488765 FBXO31Q5XUX0 539 aaPredicted RBP19.69■□□□□ 0.74
MCF2L-229ENST00000488765 TRIM34Q9BYJ4 488 aa19.69■□□□□ 0.74
MCF2L-229ENST00000488765 NINLQ9Y2I6 1382 aa19.69■□□□□ 0.74
MCF2L-229ENST00000488765 CHAF1AQ13111 956 aaPredicted RBP19.69■□□□□ 0.74
MCF2L-229ENST00000488765 ZNF592Q92610 1267 aa19.69■□□□□ 0.74
MCF2L-229ENST00000488765 BMP2KLQ5H9B9 411 aa19.68■□□□□ 0.74
MCF2L-229ENST00000488765 ABCC1P33527 1531 aa19.68■□□□□ 0.74
MCF2L-229ENST00000488765 C16orf45Q96MC5 204 aaPredicted RBP19.68■□□□□ 0.74
MCF2L-229ENST00000488765 CDCA8Q53HL2 280 aa19.67■□□□□ 0.74
MCF2L-229ENST00000488765 ZBTB40Q9NUA8 1239 aa19.67■□□□□ 0.74
MCF2L-229ENST00000488765 MTHFSP49914 203 aa19.67■□□□□ 0.74
MCF2L-229ENST00000488765 CLEC17AQ6ZS10 378 aa19.66■□□□□ 0.74
MCF2L-229ENST00000488765 CABP2Q9NPB3 220 aa19.66■□□□□ 0.74
MCF2L-229ENST00000488765 ATP10AO60312 1499 aa19.66■□□□□ 0.74
MCF2L-229ENST00000488765 CYP2E1P05181 493 aaPredicted RBP19.65■□□□□ 0.74
MCF2L-229ENST00000488765 FKBP5Q13451 457 aaPredicted RBP19.65■□□□□ 0.74
MCF2L-229ENST00000488765 CHMP3Q9Y3E7 222 aa19.65■□□□□ 0.74
MCF2L-229ENST00000488765 OTUD7AQ8TE49 926 aaPredicted RBP19.64■□□□□ 0.74
MCF2L-229ENST00000488765 TMX1Q9H3N1 280 aa19.64■□□□□ 0.74
MCF2L-229ENST00000488765 ATAD2Q6PL18 1390 aa19.64■□□□□ 0.73
MCF2L-229ENST00000488765 SLFN14P0C7P3 912 aa19.64■□□□□ 0.73
MCF2L-229ENST00000488765 GTF2F1P35269 517 aaKnown RBP eCLIP19.64■□□□□ 0.73
MCF2L-229ENST00000488765 IDI1Q13907 227 aa19.64■□□□□ 0.73
MCF2L-229ENST00000488765 SRPK2P78362 688 aaKnown RBP19.63■□□□□ 0.73
MCF2L-229ENST00000488765 GSPT1P15170 499 aaKnown RBP19.63■□□□□ 0.73
MCF2L-229ENST00000488765 NOS1P29475 1434 aa19.63■□□□□ 0.73
MCF2L-229ENST00000488765 NCBP1Q09161 790 aaKnown RBP19.63■□□□□ 0.73
MCF2L-229ENST00000488765 LARP6Q9BRS8 491 aaKnown RBP19.63■□□□□ 0.73
MCF2L-229ENST00000488765 UHRF1BP1LA0JNW5 1464 aa19.62■□□□□ 0.73
MCF2L-229ENST00000488765 NEK4P51957 841 aa19.62■□□□□ 0.73
MCF2L-229ENST00000488765 RABEP1Q15276 862 aa19.62■□□□□ 0.73
MCF2L-229ENST00000488765 ATP7AQ04656 1500 aa19.62■□□□□ 0.73
MCF2L-229ENST00000488765 MINK1Q8N4C8 1332 aaPredicted RBP19.62■□□□□ 0.73
MCF2L-229ENST00000488765 CDC45O75419 566 aa19.61■□□□□ 0.73
MCF2L-229ENST00000488765 OGFRQ9NZT2 677 aa19.61■□□□□ 0.73
MCF2L-229ENST00000488765 MAST1Q9Y2H9 1570 aa19.61■□□□□ 0.73
MCF2L-229ENST00000488765 CAPN2P17655 700 aa19.61■□□□□ 0.73
MCF2L-229ENST00000488765 KCNF1Q9H3M0 494 aa19.61■□□□□ 0.73
MCF2L-229ENST00000488765 GPRASP1Q5JY77 1395 aa19.6■□□□□ 0.73
MCF2L-229ENST00000488765 AP5Z1O43299 807 aa19.6■□□□□ 0.73
MCF2L-229ENST00000488765 GIMAP6Q6P9H5 292 aa19.6■□□□□ 0.73
MCF2L-229ENST00000488765 DIAPH3Q9NSV4 1193 aa19.6■□□□□ 0.73
MCF2L-229ENST00000488765 ST18O60284 1047 aa19.59■□□□□ 0.73
MCF2L-229ENST00000488765 LRMPQ12912 555 aa19.59■□□□□ 0.73
MCF2L-229ENST00000488765 WDR63Q8IWG1 891 aa19.59■□□□□ 0.73
MCF2L-229ENST00000488765 ZMYM3Q14202 1370 aa19.59■□□□□ 0.73
MCF2L-229ENST00000488765 TAF3Q5VWG9 929 aa19.59■□□□□ 0.73
MCF2L-229ENST00000488765 USP48Q86UV5 1035 aa19.59■□□□□ 0.73
MCF2L-229ENST00000488765 TIGD1Q96MW7 591 aa19.59■□□□□ 0.73
MCF2L-229ENST00000488765 PIK3C2GO75747 1445 aa19.58■□□□□ 0.73
MCF2L-229ENST00000488765 ANKRD7Q92527 254 aa19.58■□□□□ 0.73
MCF2L-229ENST00000488765 IFT57Q9NWB7 429 aa19.58■□□□□ 0.73
MCF2L-229ENST00000488765 ZFYVE16Q7Z3T8 1539 aa19.58■□□□□ 0.73
MCF2L-229ENST00000488765 CCDC27Q2M243 656 aa19.58■□□□□ 0.72
MCF2L-229ENST00000488765 RTF1Q92541 710 aaKnown RBP19.58■□□□□ 0.72
MCF2L-229ENST00000488765 USP26Q9BXU7 913 aa19.58■□□□□ 0.72
MCF2L-229ENST00000488765 CTNNA3Q9UI47 895 aa19.58■□□□□ 0.72
MCF2L-229ENST00000488765 FBLN1P23142 703 aa19.57■□□□□ 0.72
MCF2L-229ENST00000488765 PTGS1P23219 599 aa19.56■□□□□ 0.72
MCF2L-229ENST00000488765 MBD3O95983 291 aa19.56■□□□□ 0.72
MCF2L-229ENST00000488765 TRPM1Q7Z4N2 1603 aa19.56■□□□□ 0.72
MCF2L-229ENST00000488765 SIRT2Q8IXJ6 389 aa19.56■□□□□ 0.72
MCF2L-229ENST00000488765 DRC7Q8IY82 874 aa19.56■□□□□ 0.72
MCF2L-229ENST00000488765 ASXL1Q8IXJ9 1541 aa19.55■□□□□ 0.72
MCF2L-229ENST00000488765 TERF2Q15554 542 aa19.55■□□□□ 0.72
MCF2L-229ENST00000488765 KIAA1524Q8TCG1 905 aa19.55■□□□□ 0.72
MCF2L-229ENST00000488765 UNC13BO14795 1591 aa19.55■□□□□ 0.72
MCF2L-229ENST00000488765 NUTM2FA1L443 756 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms