RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 EDC4Q6P2E9 1401 aaKnown RBP16.04■□□□□ 0.16
CLIC4-202ENST00000488683 DLG5Q8TDM6 1919 aa16.04■□□□□ 0.16
CLIC4-202ENST00000488683 NFE2L2Q16236 605 aa16.03■□□□□ 0.16
CLIC4-202ENST00000488683 NUDT16Q96DE0 195 aaKnown RBP16.03■□□□□ 0.16
CLIC4-202ENST00000488683 UPF2Q9HAU5 1272 aaKnown RBP16.03■□□□□ 0.16
CLIC4-202ENST00000488683 KIF16BQ96L93 1317 aa16.03■□□□□ 0.16
CLIC4-202ENST00000488683 C22orf23Q9BZE7 217 aa16.03■□□□□ 0.16
CLIC4-202ENST00000488683 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
CLIC4-202ENST00000488683 VAMP4O75379 141 aa16.02■□□□□ 0.16
CLIC4-202ENST00000488683 ANKRD45Q5TZF3 282 aa16.02■□□□□ 0.16
CLIC4-202ENST00000488683 SMC5Q8IY18 1101 aa16.02■□□□□ 0.16
CLIC4-202ENST00000488683 GZF1Q9H116 711 aaPredicted RBP16.02■□□□□ 0.16
CLIC4-202ENST00000488683 ALDH1L2Q3SY69 923 aa16.02■□□□□ 0.15
CLIC4-202ENST00000488683 MIS18AQ9NYP9 233 aa16.02■□□□□ 0.15
CLIC4-202ENST00000488683 MON2Q7Z3U7 1717 aa16.02■□□□□ 0.15
CLIC4-202ENST00000488683 APBB1O00213 710 aa16.01■□□□□ 0.15
CLIC4-202ENST00000488683 CDK12Q9NYV4 1490 aaPredicted RBP16.01■□□□□ 0.15
CLIC4-202ENST00000488683 BECN1Q14457 450 aa16.01■□□□□ 0.15
CLIC4-202ENST00000488683 PRR36Q9H6K5 1346 aa16.01■□□□□ 0.15
CLIC4-202ENST00000488683 CEBPAP49715 358 aaPredicted RBP16■□□□□ 0.15
CLIC4-202ENST00000488683 IPO8O15397 1037 aaKnown RBP16■□□□□ 0.15
CLIC4-202ENST00000488683 MCM10Q7L590 875 aa16■□□□□ 0.15
CLIC4-202ENST00000488683 ANTXR1Q9H6X2 564 aa16■□□□□ 0.15
CLIC4-202ENST00000488683 C3P01024 1663 aa15.99■□□□□ 0.15
CLIC4-202ENST00000488683 AKAP12Q02952 1782 aa15.99■□□□□ 0.15
CLIC4-202ENST00000488683 KNDC1Q76NI1 1749 aa15.99■□□□□ 0.15
CLIC4-202ENST00000488683 SIRT2Q8IXJ6 389 aa15.99■□□□□ 0.15
CLIC4-202ENST00000488683 MRPL50Q8N5N7 158 aaKnown RBP15.99■□□□□ 0.15
CLIC4-202ENST00000488683 SLC26A8Q96RN1 970 aa15.99■□□□□ 0.15
CLIC4-202ENST00000488683 COG3Q96JB2 828 aa15.98■□□□□ 0.15
CLIC4-202ENST00000488683 CCDC61Q9Y6R9 512 aa15.98■□□□□ 0.15
CLIC4-202ENST00000488683 TWISTNBQ3B726 338 aaPredicted RBP15.98■□□□□ 0.15
CLIC4-202ENST00000488683 AATKQ6ZMQ8 1374 aa15.97■□□□□ 0.15
CLIC4-202ENST00000488683 ZBTB7BO15156 539 aaPredicted RBP15.97■□□□□ 0.15
CLIC4-202ENST00000488683 ZNF853P0CG23 659 aa15.97■□□□□ 0.15
CLIC4-202ENST00000488683 SULT6B1Q6IMI4 303 aa15.97■□□□□ 0.15
CLIC4-202ENST00000488683 ESF1Q9H501 851 aaKnown RBP15.97■□□□□ 0.15
CLIC4-202ENST00000488683 ITSN1Q15811 1721 aa15.97■□□□□ 0.15
CLIC4-202ENST00000488683 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
CLIC4-202ENST00000488683 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.97■□□□□ 0.15
CLIC4-202ENST00000488683 KIF13AQ9H1H9 1805 aa15.97■□□□□ 0.15
CLIC4-202ENST00000488683 TECPR2O15040 1411 aa15.97■□□□□ 0.15
CLIC4-202ENST00000488683 BRPF1P55201 1214 aaPredicted RBP15.96■□□□□ 0.15
CLIC4-202ENST00000488683 CHD1LQ86WJ1 897 aa15.96■□□□□ 0.15
CLIC4-202ENST00000488683 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.96■□□□□ 0.15
CLIC4-202ENST00000488683 ROBO2Q9HCK4 1378 aa15.96■□□□□ 0.15
CLIC4-202ENST00000488683 FOXO3O43524 673 aa15.96■□□□□ 0.15
CLIC4-202ENST00000488683 HSP90AB2PQ58FF8 381 aa15.96■□□□□ 0.15
CLIC4-202ENST00000488683 C16orf71Q8IYS4 520 aaPredicted RBP15.96■□□□□ 0.15
CLIC4-202ENST00000488683 IFT57Q9NWB7 429 aa15.96■□□□□ 0.15
CLIC4-202ENST00000488683 NUCB1Q02818 461 aa15.96■□□□□ 0.14
CLIC4-202ENST00000488683 PLEKHG5O94827 1062 aa15.95■□□□□ 0.14
CLIC4-202ENST00000488683 ANO8Q9HCE9 1232 aaPredicted RBP15.95■□□□□ 0.14
CLIC4-202ENST00000488683 PTCH1Q13635 1447 aa15.95■□□□□ 0.14
CLIC4-202ENST00000488683 GNAI1P63096 354 aa15.95■□□□□ 0.14
CLIC4-202ENST00000488683 CD2BP2O95400 341 aaKnown RBP15.94■□□□□ 0.14
CLIC4-202ENST00000488683 NUTM2GQ5VZR2 741 aa15.94■□□□□ 0.14
CLIC4-202ENST00000488683 UBR1Q8IWV7 1749 aa15.94■□□□□ 0.14
CLIC4-202ENST00000488683 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.94■□□□□ 0.14
CLIC4-202ENST00000488683 EIF4A2Q14240 407 aaKnown RBP15.93■□□□□ 0.14
CLIC4-202ENST00000488683 ZNF428Q96B54 188 aa15.93■□□□□ 0.14
CLIC4-202ENST00000488683 TNRQ92752 1358 aa15.93■□□□□ 0.14
CLIC4-202ENST00000488683 PIK3R4Q99570 1358 aa15.93■□□□□ 0.14
CLIC4-202ENST00000488683 OTUD7AQ8TE49 926 aaPredicted RBP15.93■□□□□ 0.14
CLIC4-202ENST00000488683 TMEM2Q9UHN6 1383 aa15.92■□□□□ 0.14
CLIC4-202ENST00000488683 CFAP44Q96MT7 982 aa15.92■□□□□ 0.14
CLIC4-202ENST00000488683 ADAMTS13Q76LX8 1427 aa15.92■□□□□ 0.14
CLIC4-202ENST00000488683 LTKP29376 864 aa15.92■□□□□ 0.14
CLIC4-202ENST00000488683 NECTIN2Q92692 538 aa15.92■□□□□ 0.14
CLIC4-202ENST00000488683 SMARCA5O60264 1052 aaPredicted RBP15.91■□□□□ 0.14
CLIC4-202ENST00000488683 CALD1Q05682 793 aaKnown RBP15.91■□□□□ 0.14
CLIC4-202ENST00000488683 ABCC4O15439 1325 aa15.91■□□□□ 0.14
CLIC4-202ENST00000488683 NRKQ7Z2Y5 1582 aa15.91■□□□□ 0.14
CLIC4-202ENST00000488683 SIRT1Q96EB6 747 aa15.91■□□□□ 0.14
CLIC4-202ENST00000488683 ACEP12821 1306 aa15.91■□□□□ 0.14
CLIC4-202ENST00000488683 ARHGAP45Q92619 1136 aa15.9■□□□□ 0.14
CLIC4-202ENST00000488683 RBM33Q96EV2 1170 aaKnown RBP15.9■□□□□ 0.14
CLIC4-202ENST00000488683 PEAK1Q9H792 1746 aa15.89■□□□□ 0.13
CLIC4-202ENST00000488683 TTC21BQ7Z4L5 1316 aa15.89■□□□□ 0.13
CLIC4-202ENST00000488683 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
CLIC4-202ENST00000488683 TOPAZ1Q8N9V7 1692 aa15.88■□□□□ 0.13
CLIC4-202ENST00000488683 F6X3S4 739 aa15.88■□□□□ 0.13
CLIC4-202ENST00000488683 TBC1D9Q6ZT07 1266 aa15.88■□□□□ 0.13
CLIC4-202ENST00000488683 LMOD3Q0VAK6 560 aa15.87■□□□□ 0.13
CLIC4-202ENST00000488683 OVOS2A0A0J9YW53 1432 aa15.87■□□□□ 0.13
CLIC4-202ENST00000488683 OVOS2Q6IE36 1432 aa15.87■□□□□ 0.13
CLIC4-202ENST00000488683 HDGFP51858 240 aaKnown RBP15.87■□□□□ 0.13
CLIC4-202ENST00000488683 RIMS1Q86UR5 1692 aaKnown RBP15.86■□□□□ 0.13
CLIC4-202ENST00000488683 GSPT1P15170 499 aaKnown RBP15.86■□□□□ 0.13
CLIC4-202ENST00000488683 SLC4A10Q6U841 1118 aa15.86■□□□□ 0.13
CLIC4-202ENST00000488683 G2E3Q7L622 706 aa15.86■□□□□ 0.13
CLIC4-202ENST00000488683 HSCBQ8IWL3 235 aa15.86■□□□□ 0.13
CLIC4-202ENST00000488683 KIF2CQ99661 725 aa15.86■□□□□ 0.13
CLIC4-202ENST00000488683 PTPRUQ92729 1446 aa15.85■□□□□ 0.13
CLIC4-202ENST00000488683 TSHZ3Q63HK5 1081 aa15.85■□□□□ 0.13
CLIC4-202ENST00000488683 PANK2Q9BZ23 570 aa15.85■□□□□ 0.13
CLIC4-202ENST00000488683 GCC1Q96CN9 775 aa15.85■□□□□ 0.13
CLIC4-202ENST00000488683 MEIS3Q99687 375 aa15.85■□□□□ 0.13
CLIC4-202ENST00000488683 USP6P35125 1406 aa15.85■□□□□ 0.13
CLIC4-202ENST00000488683 MCM4P33991 863 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms