RNA–Protein interactions for RNA: ENST00000488254.6

NOLC1-207, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NOLC1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-207ENST00000488254 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
NOLC1-207ENST00000488254 SLIT3O75094 1523 aa13.57□□□□□ -0.24
NOLC1-207ENST00000488254 HMOX1P09601 288 aa13.56□□□□□ -0.24
NOLC1-207ENST00000488254 EIF4A2Q14240 407 aaKnown RBP13.56□□□□□ -0.24
NOLC1-207ENST00000488254 WDR43Q15061 677 aaKnown RBP eCLIP13.56□□□□□ -0.24
NOLC1-207ENST00000488254 CFAP53Q96M91 514 aa13.56□□□□□ -0.24
NOLC1-207ENST00000488254 USP54Q70EL1 1684 aa13.56□□□□□ -0.24
NOLC1-207ENST00000488254 PNPLA6Q8IY17 1366 aa13.56□□□□□ -0.24
NOLC1-207ENST00000488254 RGPD5Q99666 1765 aa13.56□□□□□ -0.24
NOLC1-207ENST00000488254 COL3A1P02461 1466 aaPredicted RBP13.56□□□□□ -0.24
NOLC1-207ENST00000488254 DIAPH1O60610 1272 aaKnown RBP13.56□□□□□ -0.24
NOLC1-207ENST00000488254 U2AF1L5P0DN76 240 aaPredicted RBP13.56□□□□□ -0.24
NOLC1-207ENST00000488254 U2AF1Q01081 240 aaKnown RBP eCLIP13.56□□□□□ -0.24
NOLC1-207ENST00000488254 CRYBG1Q9Y4K1 1723 aa13.56□□□□□ -0.24
NOLC1-207ENST00000488254 SHPRHQ149N8 1683 aa13.56□□□□□ -0.24
NOLC1-207ENST00000488254 USHBP1Q8N6Y0 703 aa13.55□□□□□ -0.24
NOLC1-207ENST00000488254 IL13P35225 146 aa13.54□□□□□ -0.24
NOLC1-207ENST00000488254 AEBP1Q8IUX7 1158 aa13.54□□□□□ -0.24
NOLC1-207ENST00000488254 PRDM11Q9NQV5 511 aa13.54□□□□□ -0.24
NOLC1-207ENST00000488254 SMG6Q86US8 1419 aaKnown RBP13.54□□□□□ -0.24
NOLC1-207ENST00000488254 FLT4P35916 1363 aa13.54□□□□□ -0.24
NOLC1-207ENST00000488254 CDK12Q9NYV4 1490 aaPredicted RBP13.53□□□□□ -0.24
NOLC1-207ENST00000488254 FAM83GA6ND36 823 aa13.53□□□□□ -0.24
NOLC1-207ENST00000488254 IP6K1Q92551 441 aa13.53□□□□□ -0.24
NOLC1-207ENST00000488254 ABCA3Q99758 1704 aa13.53□□□□□ -0.24
NOLC1-207ENST00000488254 HNRNPUQ00839 825 aaKnown RBP eCLIP13.53□□□□□ -0.24
NOLC1-207ENST00000488254 RGPD2P0DJD1 1756 aa13.52□□□□□ -0.25
NOLC1-207ENST00000488254 ANKRD24Q8TF21 1146 aa13.51□□□□□ -0.25
NOLC1-207ENST00000488254 EYA1Q99502 592 aa13.51□□□□□ -0.25
NOLC1-207ENST00000488254 SULT6B1Q6IMI4 303 aa13.5□□□□□ -0.25
NOLC1-207ENST00000488254 STRN4Q9NRL3 753 aa13.5□□□□□ -0.25
NOLC1-207ENST00000488254 RRP7AQ9Y3A4 280 aaKnown RBP13.5□□□□□ -0.25
NOLC1-207ENST00000488254 NEUROD2Q15784 382 aa13.5□□□□□ -0.25
NOLC1-207ENST00000488254 NBPF6Q5VWK0 638 aa13.5□□□□□ -0.25
NOLC1-207ENST00000488254 NBPF4Q96M43 638 aa13.5□□□□□ -0.25
NOLC1-207ENST00000488254 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
NOLC1-207ENST00000488254 INSRP06213 1382 aa13.5□□□□□ -0.25
NOLC1-207ENST00000488254 COL18A1P39060 1754 aa13.49□□□□□ -0.25
NOLC1-207ENST00000488254 FKBP8Q14318 412 aa13.49□□□□□ -0.25
NOLC1-207ENST00000488254 BTG4Q9NY30 223 aa13.49□□□□□ -0.25
NOLC1-207ENST00000488254 CAMTA1Q9Y6Y1 1673 aa13.48□□□□□ -0.25
NOLC1-207ENST00000488254 PHACTR3Q96KR7 559 aa13.48□□□□□ -0.25
NOLC1-207ENST00000488254 APAF1O14727 1248 aa13.48□□□□□ -0.25
NOLC1-207ENST00000488254 CSB-PGBD3P0DP91 1061 aa13.48□□□□□ -0.25
NOLC1-207ENST00000488254 PRKAR2BP31323 418 aa13.48□□□□□ -0.25
NOLC1-207ENST00000488254 USP35Q9P2H5 1018 aa13.48□□□□□ -0.25
NOLC1-207ENST00000488254 CPDO75976 1380 aa13.47□□□□□ -0.25
NOLC1-207ENST00000488254 JCADQ9P266 1359 aa13.47□□□□□ -0.25
NOLC1-207ENST00000488254 COL22A1Q8NFW1 1626 aaPredicted RBP13.47□□□□□ -0.25
NOLC1-207ENST00000488254 ERBB3P21860 1342 aa13.47□□□□□ -0.25
NOLC1-207ENST00000488254 RSPH6AQ9H0K4 717 aa13.47□□□□□ -0.25
NOLC1-207ENST00000488254 NLRP2Q9NX02 1062 aa13.47□□□□□ -0.25
NOLC1-207ENST00000488254 C8orf37Q96NL8 207 aa13.46□□□□□ -0.25
NOLC1-207ENST00000488254 RTL1A6NKG5 1358 aa13.46□□□□□ -0.26
NOLC1-207ENST00000488254 LARP1Q6PKG0 1096 aaKnown RBP13.45□□□□□ -0.26
NOLC1-207ENST00000488254 EP400Q96L91 3159 aa13.45□□□□□ -0.26
NOLC1-207ENST00000488254 PLEKHF1Q96S99 279 aa13.45□□□□□ -0.26
NOLC1-207ENST00000488254 LRP6O75581 1613 aa13.45□□□□□ -0.26
NOLC1-207ENST00000488254 EVA1CP58658 441 aa13.44□□□□□ -0.26
NOLC1-207ENST00000488254 TCP11L2Q8N4U5 519 aa13.44□□□□□ -0.26
NOLC1-207ENST00000488254 IGSF1Q8N6C5 1336 aa13.44□□□□□ -0.26
NOLC1-207ENST00000488254 KIF24Q5T7B8 1368 aa13.44□□□□□ -0.26
NOLC1-207ENST00000488254 RGPD1P0DJD0 1748 aa13.43□□□□□ -0.26
NOLC1-207ENST00000488254 BLMP54132 1417 aaPredicted RBP13.43□□□□□ -0.26
NOLC1-207ENST00000488254 TOM1L2Q6ZVM7 507 aa13.43□□□□□ -0.26
NOLC1-207ENST00000488254 RUNDC1Q96C34 613 aa13.43□□□□□ -0.26
NOLC1-207ENST00000488254 NGLY1Q96IV0 654 aa13.43□□□□□ -0.26
NOLC1-207ENST00000488254 LMO7Q8WWI1 1683 aa13.43□□□□□ -0.26
NOLC1-207ENST00000488254 FCHSD2O94868 740 aa13.42□□□□□ -0.26
NOLC1-207ENST00000488254 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
NOLC1-207ENST00000488254 MEX3CQ5U5Q3 659 aaKnown RBP13.41□□□□□ -0.26
NOLC1-207ENST00000488254 MAPK8IP3Q9UPT6 1336 aa13.4□□□□□ -0.26
NOLC1-207ENST00000488254 ANP32EQ9BTT0 268 aa13.4□□□□□ -0.26
NOLC1-207ENST00000488254 WDR17Q8IZU2 1322 aa13.4□□□□□ -0.26
NOLC1-207ENST00000488254 FBXO41Q8TF61 875 aa13.4□□□□□ -0.26
NOLC1-207ENST00000488254 DCTN1Q14203 1278 aa13.39□□□□□ -0.27
NOLC1-207ENST00000488254 THUMPD2Q9BTF0 503 aaKnown RBP13.39□□□□□ -0.27
NOLC1-207ENST00000488254 PLCH1Q4KWH8 1693 aa13.39□□□□□ -0.27
NOLC1-207ENST00000488254 TMPOP42166 694 aaKnown RBP13.39□□□□□ -0.27
NOLC1-207ENST00000488254 MTHFSDQ2M296 383 aaKnown RBP13.39□□□□□ -0.27
NOLC1-207ENST00000488254 CDCA7LQ96GN5 454 aa13.39□□□□□ -0.27
NOLC1-207ENST00000488254 CCDC9Q9Y3X0 531 aaKnown RBP13.39□□□□□ -0.27
NOLC1-207ENST00000488254 COL14A1Q05707 1796 aaKnown RBP13.38□□□□□ -0.27
NOLC1-207ENST00000488254 KDRP35968 1356 aa13.38□□□□□ -0.27
NOLC1-207ENST00000488254 SPATA31A6Q5VVP1 1343 aa13.38□□□□□ -0.27
NOLC1-207ENST00000488254 RIPK4P57078 832 aa13.38□□□□□ -0.27
NOLC1-207ENST00000488254 SPINK5Q9NQ38 1064 aaPredicted RBP13.37□□□□□ -0.27
NOLC1-207ENST00000488254 MEGF6O75095 1541 aa13.36□□□□□ -0.27
NOLC1-207ENST00000488254 DLG5Q8TDM6 1919 aa13.36□□□□□ -0.27
NOLC1-207ENST00000488254 FAM208AQ9UK61 1670 aaKnown RBP13.36□□□□□ -0.27
NOLC1-207ENST00000488254 NEFLP07196 543 aa13.35□□□□□ -0.27
NOLC1-207ENST00000488254 TRIM35Q9UPQ4 493 aa13.35□□□□□ -0.27
NOLC1-207ENST00000488254 ZBED9Q6R2W3 1325 aa13.35□□□□□ -0.27
NOLC1-207ENST00000488254 NEFMP07197 916 aa13.35□□□□□ -0.27
NOLC1-207ENST00000488254 MCM10Q7L590 875 aa13.35□□□□□ -0.27
NOLC1-207ENST00000488254 RAPGEF4Q8WZA2 1011 aa13.35□□□□□ -0.27
NOLC1-207ENST00000488254 USP21Q9UK80 565 aa13.35□□□□□ -0.27
NOLC1-207ENST00000488254 BCL9LQ86UU0 1499 aa13.35□□□□□ -0.27
NOLC1-207ENST00000488254 AFF2P51816 1311 aa13.35□□□□□ -0.27
NOLC1-207ENST00000488254 SLIT2O94813 1529 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms