RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 TRIM37O94972 964 aa28.65■■■□□ 2.18
TRIM8-204ENST00000487927 LRRC37A3O60309 1634 aa28.65■■■□□ 2.18
TRIM8-204ENST00000487927 USP31Q70CQ4 1352 aa28.64■■■□□ 2.18
TRIM8-204ENST00000487927 SOX12O15370 315 aa28.64■■■□□ 2.18
TRIM8-204ENST00000487927 SLC12A5Q9H2X9 1139 aa28.64■■■□□ 2.18
TRIM8-204ENST00000487927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.63■■■□□ 2.17
TRIM8-204ENST00000487927 TMC1Q8TDI8 760 aa28.63■■■□□ 2.17
TRIM8-204ENST00000487927 WDR17Q8IZU2 1322 aa28.63■■■□□ 2.17
TRIM8-204ENST00000487927 TESK2Q96S53 571 aa28.62■■■□□ 2.17
TRIM8-204ENST00000487927 PEAK1Q9H792 1746 aa28.62■■■□□ 2.17
TRIM8-204ENST00000487927 TOM1L2Q6ZVM7 507 aa28.61■■■□□ 2.17
TRIM8-204ENST00000487927 PUS7Q96PZ0 661 aaKnown RBP28.61■■■□□ 2.17
TRIM8-204ENST00000487927 ABCC6O95255 1503 aa28.6■■■□□ 2.17
TRIM8-204ENST00000487927 EZH2Q15910 746 aaKnown RBP28.6■■■□□ 2.17
TRIM8-204ENST00000487927 NME9Q86XW9 330 aa28.6■■■□□ 2.17
TRIM8-204ENST00000487927 ST20-MTHFSA0A0A6YYL1 179 aa28.59■■■□□ 2.17
TRIM8-204ENST00000487927 CAMKK2Q96RR4 588 aa28.59■■■□□ 2.17
TRIM8-204ENST00000487927 LTN1O94822 1766 aa28.59■■■□□ 2.17
TRIM8-204ENST00000487927 A0A1W2PP64 1363 aa28.59■■■□□ 2.17
TRIM8-204ENST00000487927 EDC4Q6P2E9 1401 aaKnown RBP28.59■■■□□ 2.17
TRIM8-204ENST00000487927 PSDA5PKW4 1024 aaPredicted RBP28.58■■■□□ 2.17
TRIM8-204ENST00000487927 HDGFL2Q7Z4V5 671 aaPredicted RBP28.58■■■□□ 2.17
TRIM8-204ENST00000487927 RREB1Q92766 1687 aa28.58■■■□□ 2.16
TRIM8-204ENST00000487927 SBF2Q86WG5 1849 aa28.57■■■□□ 2.16
TRIM8-204ENST00000487927 LRP5O75197 1615 aa28.57■■■□□ 2.16
TRIM8-204ENST00000487927 APBA3O96018 575 aa28.56■■■□□ 2.16
TRIM8-204ENST00000487927 TERF2IPQ9NYB0 399 aa28.54■■■□□ 2.16
TRIM8-204ENST00000487927 OVOS2A0A0G2JMS6 1433 aa28.53■■■□□ 2.16
TRIM8-204ENST00000487927 OVOS2A0A0J9YW53 1432 aa28.53■■■□□ 2.16
TRIM8-204ENST00000487927 OVOS2Q6IE36 1432 aa28.53■■■□□ 2.16
TRIM8-204ENST00000487927 NUP188Q5SRE5 1749 aa28.53■■■□□ 2.16
TRIM8-204ENST00000487927 CARD10Q9BWT7 1032 aa28.53■■■□□ 2.16
TRIM8-204ENST00000487927 PARD3Q8TEW0 1356 aa28.52■■■□□ 2.16
TRIM8-204ENST00000487927 DDB1Q16531 1140 aa28.52■■■□□ 2.16
TRIM8-204ENST00000487927 CSB-PGBD3P0DP91 1061 aa28.51■■■□□ 2.15
TRIM8-204ENST00000487927 NINLQ9Y2I6 1382 aa28.5■■■□□ 2.15
TRIM8-204ENST00000487927 R3HDM1Q15032 1099 aaKnown RBP28.48■■■□□ 2.15
TRIM8-204ENST00000487927 CDCA7Q9BWT1 371 aaPredicted RBP28.48■■■□□ 2.15
TRIM8-204ENST00000487927 USP47Q96K76 1375 aa28.48■■■□□ 2.15
TRIM8-204ENST00000487927 C11orf95C9JLR9 678 aaPredicted RBP28.47■■■□□ 2.15
TRIM8-204ENST00000487927 MARCH10Q8NA82 808 aaPredicted RBP28.46■■■□□ 2.15
TRIM8-204ENST00000487927 CCDC7Q96M83 1385 aa28.46■■■□□ 2.15
TRIM8-204ENST00000487927 ERBB3P21860 1342 aa28.45■■■□□ 2.15
TRIM8-204ENST00000487927 RGPD3A6NKT7 1758 aaPredicted RBP28.45■■■□□ 2.15
TRIM8-204ENST00000487927 RGPD4Q7Z3J3 1758 aa28.45■■■□□ 2.15
TRIM8-204ENST00000487927 SLC24A1O60721 1099 aa28.45■■■□□ 2.14
TRIM8-204ENST00000487927 BCL9O00512 1426 aa28.43■■■□□ 2.14
TRIM8-204ENST00000487927 PTF1AQ7RTS3 328 aa28.42■■■□□ 2.14
TRIM8-204ENST00000487927 ANKRD36BQ8N2N9 1353 aa28.4■■■□□ 2.14
TRIM8-204ENST00000487927 TMF1P82094 1093 aa28.39■■■□□ 2.14
TRIM8-204ENST00000487927 TNS2Q63HR2 1409 aa28.39■■■□□ 2.14
TRIM8-204ENST00000487927 ANKRD24Q8TF21 1146 aa28.38■■■□□ 2.13
TRIM8-204ENST00000487927 NLRP2Q9NX02 1062 aa28.38■■■□□ 2.13
TRIM8-204ENST00000487927 EXOC5O00471 708 aa28.37■■■□□ 2.13
TRIM8-204ENST00000487927 BCL11BQ9C0K0 894 aaPredicted RBP28.37■■■□□ 2.13
TRIM8-204ENST00000487927 PLSCR1O15162 318 aa28.35■■■□□ 2.13
TRIM8-204ENST00000487927 TIMELESSQ9UNS1 1208 aa28.35■■■□□ 2.13
TRIM8-204ENST00000487927 FAM208AQ9UK61 1670 aaKnown RBP28.35■■■□□ 2.13
TRIM8-204ENST00000487927 IP6K1Q92551 441 aa28.34■■■□□ 2.13
TRIM8-204ENST00000487927 COG3Q96JB2 828 aa28.34■■■□□ 2.13
TRIM8-204ENST00000487927 MYOM1P52179 1685 aa28.33■■■□□ 2.13
TRIM8-204ENST00000487927 FBLN1P23142 703 aa28.32■■■□□ 2.12
TRIM8-204ENST00000487927 NBPF14Q5TI25 921 aa28.32■■■□□ 2.12
TRIM8-204ENST00000487927 MAP3K19Q56UN5 1328 aa28.32■■■□□ 2.12
TRIM8-204ENST00000487927 IL2RBP14784 551 aa28.31■■■□□ 2.12
TRIM8-204ENST00000487927 NHSQ6T4R5 1651 aa28.31■■■□□ 2.12
TRIM8-204ENST00000487927 KIF20BQ96Q89 1820 aa28.3■■■□□ 2.12
TRIM8-204ENST00000487927 RGPD2P0DJD1 1756 aa28.3■■■□□ 2.12
TRIM8-204ENST00000487927 FYB1O15117 783 aa28.28■■■□□ 2.12
TRIM8-204ENST00000487927 PROM2Q8N271 834 aa28.28■■■□□ 2.12
TRIM8-204ENST00000487927 HOXC9P31274 260 aa28.27■■■□□ 2.12
TRIM8-204ENST00000487927 CDCA8Q53HL2 280 aa28.26■■■□□ 2.11
TRIM8-204ENST00000487927 LTV1Q96GA3 475 aaPredicted RBP28.26■■■□□ 2.11
TRIM8-204ENST00000487927 GGNBP2Q9H3C7 697 aa28.26■■■□□ 2.11
TRIM8-204ENST00000487927 KCNQ2O43526 872 aa28.25■■■□□ 2.11
TRIM8-204ENST00000487927 ANO8Q9HCE9 1232 aaPredicted RBP28.25■■■□□ 2.11
TRIM8-204ENST00000487927 KAT6BQ8WYB5 2073 aa28.23■■■□□ 2.11
TRIM8-204ENST00000487927 AMPHP49418 695 aa28.23■■■□□ 2.11
TRIM8-204ENST00000487927 ACSBG1Q96GR2 724 aa28.22■■■□□ 2.11
TRIM8-204ENST00000487927 BTAF1O14981 1849 aa28.22■■■□□ 2.11
TRIM8-204ENST00000487927 RTL1A6NKG5 1358 aa28.22■■■□□ 2.11
TRIM8-204ENST00000487927 CASZ1Q86V15 1759 aa28.22■■■□□ 2.11
TRIM8-204ENST00000487927 RRS1Q15050 365 aaKnown RBP28.21■■■□□ 2.11
TRIM8-204ENST00000487927 CARD14Q9BXL6 1004 aa28.2■■■□□ 2.1
TRIM8-204ENST00000487927 SHANK3Q9BYB0 1731 aa28.2■■■□□ 2.1
TRIM8-204ENST00000487927 TXNRD1Q16881 649 aa28.18■■■□□ 2.1
TRIM8-204ENST00000487927 NSD3Q9BZ95 1437 aa28.17■■■□□ 2.1
TRIM8-204ENST00000487927 MEGF6O75095 1541 aa28.15■■■□□ 2.1
TRIM8-204ENST00000487927 DDX54Q8TDD1 881 aaKnown RBP28.13■■■□□ 2.09
TRIM8-204ENST00000487927 PAPPAQ13219 1627 aa28.13■■■□□ 2.09
TRIM8-204ENST00000487927 NBPF6Q5VWK0 638 aa28.12■■■□□ 2.09
TRIM8-204ENST00000487927 NBPF4Q96M43 638 aa28.12■■■□□ 2.09
TRIM8-204ENST00000487927 PDGFDQ9GZP0 370 aaPredicted RBP28.12■■■□□ 2.09
TRIM8-204ENST00000487927 DOT1LQ8TEK3 1739 aa28.12■■■□□ 2.09
TRIM8-204ENST00000487927 SPON1Q9HCB6 807 aa28.11■■■□□ 2.09
TRIM8-204ENST00000487927 INSRP06213 1382 aa28.1■■■□□ 2.09
TRIM8-204ENST00000487927 HSP90AB2PQ58FF8 381 aa28.09■■■□□ 2.09
TRIM8-204ENST00000487927 FLT4P35916 1363 aa28.09■■■□□ 2.09
TRIM8-204ENST00000487927 ANKRD26Q9UPS8 1709 aa28.09■■■□□ 2.09
TRIM8-204ENST00000487927 USHBP1Q8N6Y0 703 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms