RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 USP35Q9P2H5 1018 aa15.94■□□□□ 0.14
RAB11FIP3-210ENST00000487899 ZRANB1Q9UGI0 708 aa15.94■□□□□ 0.14
RAB11FIP3-210ENST00000487899 RGPD2P0DJD1 1756 aa15.94■□□□□ 0.14
RAB11FIP3-210ENST00000487899 ZNF692Q9BU19 519 aaPredicted RBP15.93■□□□□ 0.14
RAB11FIP3-210ENST00000487899 USP47Q96K76 1375 aa15.92■□□□□ 0.14
RAB11FIP3-210ENST00000487899 SHANK3Q9BYB0 1731 aa15.92■□□□□ 0.14
RAB11FIP3-210ENST00000487899 NINLQ9Y2I6 1382 aa15.91■□□□□ 0.14
RAB11FIP3-210ENST00000487899 ARHGEF25Q86VW2 580 aa15.91■□□□□ 0.14
RAB11FIP3-210ENST00000487899 TCP11L2Q8N4U5 519 aa15.91■□□□□ 0.14
RAB11FIP3-210ENST00000487899 AXIN2Q9Y2T1 843 aa15.91■□□□□ 0.14
RAB11FIP3-210ENST00000487899 NHSQ6T4R5 1651 aa15.91■□□□□ 0.14
RAB11FIP3-210ENST00000487899 WDR17Q8IZU2 1322 aa15.91■□□□□ 0.14
RAB11FIP3-210ENST00000487899 EVA1CP58658 441 aa15.9■□□□□ 0.14
RAB11FIP3-210ENST00000487899 SF3B2Q13435 895 aaKnown RBP15.9■□□□□ 0.14
RAB11FIP3-210ENST00000487899 THRAP3Q9Y2W1 955 aaKnown RBP15.9■□□□□ 0.14
RAB11FIP3-210ENST00000487899 ANKRD26Q9UPS8 1709 aa15.9■□□□□ 0.14
RAB11FIP3-210ENST00000487899 OVOS2A0A0G2JMS6 1433 aa15.89■□□□□ 0.13
RAB11FIP3-210ENST00000487899 ST20-MTHFSA0A0A6YYL1 179 aa15.89■□□□□ 0.13
RAB11FIP3-210ENST00000487899 ZBTB7CA1YPR0 619 aa15.89■□□□□ 0.13
RAB11FIP3-210ENST00000487899 NME9Q86XW9 330 aa15.89■□□□□ 0.13
RAB11FIP3-210ENST00000487899 KCNH5Q8NCM2 988 aa15.89■□□□□ 0.13
RAB11FIP3-210ENST00000487899 TNS2Q63HR2 1409 aa15.88■□□□□ 0.13
RAB11FIP3-210ENST00000487899 SOX12O15370 315 aa15.88■□□□□ 0.13
RAB11FIP3-210ENST00000487899 BAG6P46379 1132 aa15.88■□□□□ 0.13
RAB11FIP3-210ENST00000487899 PUS7Q96PZ0 661 aaKnown RBP15.88■□□□□ 0.13
RAB11FIP3-210ENST00000487899 SLC12A5Q9H2X9 1139 aa15.88■□□□□ 0.13
RAB11FIP3-210ENST00000487899 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.87■□□□□ 0.13
RAB11FIP3-210ENST00000487899 FAM196AQ6ZSG2 479 aa15.86■□□□□ 0.13
RAB11FIP3-210ENST00000487899 TMC1Q8TDI8 760 aa15.86■□□□□ 0.13
RAB11FIP3-210ENST00000487899 ANKRD36BQ8N2N9 1353 aa15.86■□□□□ 0.13
RAB11FIP3-210ENST00000487899 BTAF1O14981 1849 aa15.85■□□□□ 0.13
RAB11FIP3-210ENST00000487899 EN1Q05925 392 aaPredicted RBP15.85■□□□□ 0.13
RAB11FIP3-210ENST00000487899 HDGFL2Q7Z4V5 671 aaPredicted RBP15.85■□□□□ 0.13
RAB11FIP3-210ENST00000487899 PARD3Q8TEW0 1356 aa15.85■□□□□ 0.13
RAB11FIP3-210ENST00000487899 TRIM37O94972 964 aa15.84■□□□□ 0.13
RAB11FIP3-210ENST00000487899 TOM1L2Q6ZVM7 507 aa15.84■□□□□ 0.13
RAB11FIP3-210ENST00000487899 ERBB3P21860 1342 aa15.84■□□□□ 0.13
RAB11FIP3-210ENST00000487899 CLSPNQ9HAW4 1339 aa15.84■□□□□ 0.13
RAB11FIP3-210ENST00000487899 CASZ1Q86V15 1759 aa15.84■□□□□ 0.13
RAB11FIP3-210ENST00000487899 BCL9O00512 1426 aa15.84■□□□□ 0.13
RAB11FIP3-210ENST00000487899 DOT1LQ8TEK3 1739 aa15.83■□□□□ 0.13
RAB11FIP3-210ENST00000487899 TERF2IPQ9NYB0 399 aa15.83■□□□□ 0.12
RAB11FIP3-210ENST00000487899 CCDC7Q96M83 1385 aa15.83■□□□□ 0.12
RAB11FIP3-210ENST00000487899 PDE3BQ13370 1112 aa15.82■□□□□ 0.12
RAB11FIP3-210ENST00000487899 EZH2Q15910 746 aaKnown RBP15.81■□□□□ 0.12
RAB11FIP3-210ENST00000487899 CAMKK2Q96RR4 588 aa15.81■□□□□ 0.12
RAB11FIP3-210ENST00000487899 CARD10Q9BWT7 1032 aa15.81■□□□□ 0.12
RAB11FIP3-210ENST00000487899 PAPPAQ13219 1627 aa15.8■□□□□ 0.12
RAB11FIP3-210ENST00000487899 PSDA5PKW4 1024 aaPredicted RBP15.79■□□□□ 0.12
RAB11FIP3-210ENST00000487899 DDB1Q16531 1140 aa15.79■□□□□ 0.12
RAB11FIP3-210ENST00000487899 TMF1P82094 1093 aa15.77■□□□□ 0.12
RAB11FIP3-210ENST00000487899 MARCH10Q8NA82 808 aaPredicted RBP15.77■□□□□ 0.12
RAB11FIP3-210ENST00000487899 CDCA7Q9BWT1 371 aaPredicted RBP15.77■□□□□ 0.12
RAB11FIP3-210ENST00000487899 TIMELESSQ9UNS1 1208 aa15.77■□□□□ 0.12
RAB11FIP3-210ENST00000487899 MAP2P11137 1827 aaKnown RBP15.77■□□□□ 0.11
RAB11FIP3-210ENST00000487899 TUBGCP6Q96RT7 1819 aa15.77■□□□□ 0.11
RAB11FIP3-210ENST00000487899 RTL1A6NKG5 1358 aa15.76■□□□□ 0.11
RAB11FIP3-210ENST00000487899 SLC24A1O60721 1099 aa15.76■□□□□ 0.11
RAB11FIP3-210ENST00000487899 APBA3O96018 575 aa15.76■□□□□ 0.11
RAB11FIP3-210ENST00000487899 CSB-PGBD3P0DP91 1061 aa15.76■□□□□ 0.11
RAB11FIP3-210ENST00000487899 PKD1L3Q7Z443 1732 aa15.76■□□□□ 0.11
RAB11FIP3-210ENST00000487899 LY75O60449 1722 aa15.75■□□□□ 0.11
RAB11FIP3-210ENST00000487899 PTF1AQ7RTS3 328 aa15.75■□□□□ 0.11
RAB11FIP3-210ENST00000487899 ANKRD24Q8TF21 1146 aa15.75■□□□□ 0.11
RAB11FIP3-210ENST00000487899 PCGF6Q9BYE7 350 aa15.75■□□□□ 0.11
RAB11FIP3-210ENST00000487899 QSER1Q2KHR3 1735 aa15.74■□□□□ 0.11
RAB11FIP3-210ENST00000487899 MEGF6O75095 1541 aa15.74■□□□□ 0.11
RAB11FIP3-210ENST00000487899 MAP3K19Q56UN5 1328 aa15.74■□□□□ 0.11
RAB11FIP3-210ENST00000487899 NSD3Q9BZ95 1437 aa15.74■□□□□ 0.11
RAB11FIP3-210ENST00000487899 KAT6BQ8WYB5 2073 aa15.74■□□□□ 0.11
RAB11FIP3-210ENST00000487899 TOGARAM1Q9Y4F4 1720 aa15.74■□□□□ 0.11
RAB11FIP3-210ENST00000487899 C11orf95C9JLR9 678 aaPredicted RBP15.73■□□□□ 0.11
RAB11FIP3-210ENST00000487899 R3HDM1Q15032 1099 aaKnown RBP15.73■□□□□ 0.11
RAB11FIP3-210ENST00000487899 COG3Q96JB2 828 aa15.72■□□□□ 0.11
RAB11FIP3-210ENST00000487899 IP6K1Q92551 441 aa15.71■□□□□ 0.11
RAB11FIP3-210ENST00000487899 NLRP2Q9NX02 1062 aa15.71■□□□□ 0.11
RAB11FIP3-210ENST00000487899 FYB1O15117 783 aa15.7■□□□□ 0.1
RAB11FIP3-210ENST00000487899 FBLN1P23142 703 aa15.7■□□□□ 0.1
RAB11FIP3-210ENST00000487899 HOXC9P31274 260 aa15.7■□□□□ 0.1
RAB11FIP3-210ENST00000487899 ITGB4P16144 1822 aa15.7■□□□□ 0.1
RAB11FIP3-210ENST00000487899 IL2RBP14784 551 aa15.69■□□□□ 0.1
RAB11FIP3-210ENST00000487899 BCL11BQ9C0K0 894 aaPredicted RBP15.69■□□□□ 0.1
RAB11FIP3-210ENST00000487899 GGNBP2Q9H3C7 697 aa15.69■□□□□ 0.1
RAB11FIP3-210ENST00000487899 PLSCR1O15162 318 aa15.68■□□□□ 0.1
RAB11FIP3-210ENST00000487899 CDCA8Q53HL2 280 aa15.68■□□□□ 0.1
RAB11FIP3-210ENST00000487899 CARD14Q9BXL6 1004 aa15.68■□□□□ 0.1
RAB11FIP3-210ENST00000487899 NCAPD2Q15021 1401 aa15.68■□□□□ 0.1
RAB11FIP3-210ENST00000487899 ANO8Q9HCE9 1232 aaPredicted RBP15.67■□□□□ 0.1
RAB11FIP3-210ENST00000487899 COL24A1Q17RW2 1714 aa15.67■□□□□ 0.1
RAB11FIP3-210ENST00000487899 TAF1LQ8IZX4 1826 aa15.66■□□□□ 0.1
RAB11FIP3-210ENST00000487899 FLT4P35916 1363 aa15.66■□□□□ 0.1
RAB11FIP3-210ENST00000487899 EXOC5O00471 708 aa15.66■□□□□ 0.1
RAB11FIP3-210ENST00000487899 RRS1Q15050 365 aaKnown RBP15.66■□□□□ 0.1
RAB11FIP3-210ENST00000487899 INSRP06213 1382 aa15.65■□□□□ 0.1
RAB11FIP3-210ENST00000487899 KIF24Q5T7B8 1368 aa15.65■□□□□ 0.1
RAB11FIP3-210ENST00000487899 LTV1Q96GA3 475 aaPredicted RBP15.65■□□□□ 0.1
RAB11FIP3-210ENST00000487899 SMG6Q86US8 1419 aaKnown RBP15.65■□□□□ 0.1
RAB11FIP3-210ENST00000487899 C5P01031 1676 aa15.64■□□□□ 0.09
RAB11FIP3-210ENST00000487899 KCNQ2O43526 872 aa15.64■□□□□ 0.09
RAB11FIP3-210ENST00000487899 PROM2Q8N271 834 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms