RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 GPSM3Q9Y4H4 160 aa8.88□□□□□ -0.99
RBM39-234ENST00000487604 LCE2CQ5TA81 110 aa8.87□□□□□ -0.99
RBM39-234ENST00000487604 ZBTB33Q86T24 672 aa8.87□□□□□ -0.99
RBM39-234ENST00000487604 TRIM34Q9BYJ4 488 aa8.87□□□□□ -0.99
RBM39-234ENST00000487604 CCDC116Q8IYX3 515 aa8.86□□□□□ -0.99
RBM39-234ENST00000487604 ADAM32Q8TC27 787 aa8.86□□□□□ -0.99
RBM39-234ENST00000487604 EMILIN1Q9Y6C2 1016 aa8.86□□□□□ -0.99
RBM39-234ENST00000487604 SLC10A4Q96EP9 437 aa8.85□□□□□ -0.99
RBM39-234ENST00000487604 KCTD15Q96SI1 283 aaPredicted RBP8.85□□□□□ -0.99
RBM39-234ENST00000487604 C6orf118Q5T5N4 469 aa8.84□□□□□ -0.99
RBM39-234ENST00000487604 PPP1R26Q5T8A7 1209 aaPredicted RBP8.84□□□□□ -0.99
RBM39-234ENST00000487604 MEIOBQ8N635 442 aa8.84□□□□□ -0.99
RBM39-234ENST00000487604 PNMA1Q8ND90 353 aa8.84□□□□□ -0.99
RBM39-234ENST00000487604 NXF1Q9UBU9 619 aaKnown RBP8.84□□□□□ -0.99
RBM39-234ENST00000487604 CDV3Q9UKY7 258 aaKnown RBP8.83□□□□□ -1
RBM39-234ENST00000487604 SOBPA7XYQ1 873 aa8.82□□□□□ -1
RBM39-234ENST00000487604 GJD4Q96KN9 370 aaPredicted RBP8.82□□□□□ -1
RBM39-234ENST00000487604 UPP2O95045 317 aa8.81□□□□□ -1
RBM39-234ENST00000487604 BMP2P12643 396 aa8.81□□□□□ -1
RBM39-234ENST00000487604 LINC00528Q8N1L1 170 aa8.81□□□□□ -1
RBM39-234ENST00000487604 VEGFBP49765 207 aa8.8□□□□□ -1
RBM39-234ENST00000487604 CBLBQ13191 982 aa8.8□□□□□ -1
RBM39-234ENST00000487604 INTS6LQ5JSJ4 861 aaKnown RBP8.8□□□□□ -1
RBM39-234ENST00000487604 TSEN34Q9BSV6 310 aaKnown RBP8.8□□□□□ -1
RBM39-234ENST00000487604 WIPF1O43516 503 aa8.79□□□□□ -1
RBM39-234ENST00000487604 Q6ZVU0 165 aa8.79□□□□□ -1
RBM39-234ENST00000487604 NPAS3Q8IXF0 933 aa8.79□□□□□ -1
RBM39-234ENST00000487604 PGPEP1Q9NXJ5 209 aa8.79□□□□□ -1
RBM39-234ENST00000487604 DHX9Q08211 1270 aaKnown RBP8.78□□□□□ -1
RBM39-234ENST00000487604 DZIP3Q86Y13 1208 aaKnown RBP8.78□□□□□ -1
RBM39-234ENST00000487604 BANK1Q8NDB2 785 aa8.78□□□□□ -1
RBM39-234ENST00000487604 SLC16A10Q8TF71 515 aa8.78□□□□□ -1
RBM39-234ENST00000487604 SOS2Q07890 1332 aaPredicted RBP8.78□□□□□ -1
RBM39-234ENST00000487604 H3BM21 787 aa8.77□□□□□ -1.01
RBM39-234ENST00000487604 MAN1A2O60476 641 aa8.77□□□□□ -1.01
RBM39-234ENST00000487604 NBPF20Q3BBV1 942 aa8.76□□□□□ -1.01
RBM39-234ENST00000487604 ZBBXA8MT70 800 aa8.75□□□□□ -1.01
RBM39-234ENST00000487604 ESPNB1AK53 854 aa8.75□□□□□ -1.01
RBM39-234ENST00000487604 FBXO45P0C2W1 286 aa8.75□□□□□ -1.01
RBM39-234ENST00000487604 RAB15P59190 212 aa8.75□□□□□ -1.01
RBM39-234ENST00000487604 MTMR14Q8NCE2 650 aa8.75□□□□□ -1.01
RBM39-234ENST00000487604 AGBL1Q96MI9 1066 aa8.75□□□□□ -1.01
RBM39-234ENST00000487604 SNRKQ9NRH2 765 aa8.75□□□□□ -1.01
RBM39-234ENST00000487604 TMPRSS4Q9NRS4 437 aa8.75□□□□□ -1.01
RBM39-234ENST00000487604 DNMT3LQ9UJW3 386 aa8.75□□□□□ -1.01
RBM39-234ENST00000487604 ERVH48-1M5A8F1 160 aa8.74□□□□□ -1.01
RBM39-234ENST00000487604 GMPRP36959 345 aa8.74□□□□□ -1.01
RBM39-234ENST00000487604 IRF7Q92985 503 aa8.74□□□□□ -1.01
RBM39-234ENST00000487604 ERBB4Q15303 1308 aa8.74□□□□□ -1.01
RBM39-234ENST00000487604 TTLL8A6PVC2 850 aa8.73□□□□□ -1.01
RBM39-234ENST00000487604 SPINT1O43278 529 aa8.73□□□□□ -1.01
RBM39-234ENST00000487604 GPR37L1O60883 481 aa8.73□□□□□ -1.01
RBM39-234ENST00000487604 PRKCSHP14314 528 aaPredicted RBP8.73□□□□□ -1.01
RBM39-234ENST00000487604 ZNF784Q8NCA9 323 aaPredicted RBP8.73□□□□□ -1.01
RBM39-234ENST00000487604 SOCS7O14512 581 aa8.72□□□□□ -1.01
RBM39-234ENST00000487604 LILRA1O75019 489 aa8.72□□□□□ -1.01
RBM39-234ENST00000487604 ADD1P35611 737 aaKnown RBP8.72□□□□□ -1.01
RBM39-234ENST00000487604 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
RBM39-234ENST00000487604 GIGYF1O75420 1035 aaPredicted RBP8.71□□□□□ -1.02
RBM39-234ENST00000487604 FIGNL2A6NMB9 653 aa8.7□□□□□ -1.02
RBM39-234ENST00000487604 INSM1Q01101 510 aaPredicted RBP8.7□□□□□ -1.02
RBM39-234ENST00000487604 RELBQ01201 579 aa8.7□□□□□ -1.02
RBM39-234ENST00000487604 PPFIA3O75145 1194 aa8.69□□□□□ -1.02
RBM39-234ENST00000487604 NR1H3Q13133 447 aa8.69□□□□□ -1.02
RBM39-234ENST00000487604 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.69□□□□□ -1.021e-45■□□□□ 9.2
RBM39-234ENST00000487604 SEPT12Q8IYM1 358 aa8.69□□□□□ -1.02
RBM39-234ENST00000487604 KDF1Q8NAX2 398 aaPredicted RBP8.69□□□□□ -1.02
RBM39-234ENST00000487604 INSM2Q96T92 566 aaPredicted RBP8.69□□□□□ -1.02
RBM39-234ENST00000487604 ZNF395Q9H8N7 513 aaPredicted RBP8.69□□□□□ -1.02
RBM39-234ENST00000487604 NDUFB9Q9Y6M9 179 aa8.69□□□□□ -1.02
RBM39-234ENST00000487604 CTSOP43234 321 aaPredicted RBP8.68□□□□□ -1.02
RBM39-234ENST00000487604 ADH1AP07327 375 aa8.67□□□□□ -1.02
RBM39-234ENST00000487604 VSIG8P0DPA2 414 aa8.67□□□□□ -1.02
RBM39-234ENST00000487604 PTGIRP43119 386 aa8.66□□□□□ -1.02
RBM39-234ENST00000487604 PTSQ03393 145 aa8.66□□□□□ -1.02
RBM39-234ENST00000487604 CYLDQ9NQC7 956 aa8.66□□□□□ -1.02
RBM39-234ENST00000487604 STK17AQ9UEE5 414 aa8.66□□□□□ -1.02
RBM39-234ENST00000487604 APBB1O00213 710 aa8.65□□□□□ -1.02
RBM39-234ENST00000487604 LORP23490 312 aaPredicted RBP8.65□□□□□ -1.02
RBM39-234ENST00000487604 MCCD1P59942 119 aaPredicted RBP8.64□□□□□ -1.03
RBM39-234ENST00000487604 POLMQ9NP87 494 aaPredicted RBP8.64□□□□□ -1.03
RBM39-234ENST00000487604 CCDC125Q86Z20 511 aa8.63□□□□□ -1.03
RBM39-234ENST00000487604 RNF217Q8TC41 542 aa8.63□□□□□ -1.03
RBM39-234ENST00000487604 TBC1D2BQ9UPU7 963 aa8.63□□□□□ -1.03
RBM39-234ENST00000487604 RNF20Q5VTR2 975 aa8.62□□□□□ -1.03
RBM39-234ENST00000487604 CCDC155Q8N6L0 562 aa8.62□□□□□ -1.03
RBM39-234ENST00000487604 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
RBM39-234ENST00000487604 SLC35F4A4IF30 521 aa8.61□□□□□ -1.03
RBM39-234ENST00000487604 ERVK-9P63128 1117 aa8.61□□□□□ -1.03
RBM39-234ENST00000487604 FOXD4L5Q5VV16 416 aaPredicted RBP8.61□□□□□ -1.03
RBM39-234ENST00000487604 GPR161Q8N6U8 529 aaKnown RBP8.6□□□□□ -1.03
RBM39-234ENST00000487604 ZSCAN1Q8NBB4 408 aa8.6□□□□□ -1.03
RBM39-234ENST00000487604 TRIM52Q96A61 297 aa8.6□□□□□ -1.03
RBM39-234ENST00000487604 SENP3-EIF4A1A0A087X0R7 540 aa8.59□□□□□ -1.03
RBM39-234ENST00000487604 ATP5J2-PTCD1G3V325 749 aa8.59□□□□□ -1.03
RBM39-234ENST00000487604 SCTRP47872 440 aa8.59□□□□□ -1.03
RBM39-234ENST00000487604 IRF5Q13568 498 aa8.59□□□□□ -1.03
RBM39-234ENST00000487604 CC2D2BQ6DHV5 1058 aa8.59□□□□□ -1.03
RBM39-234ENST00000487604 ZNF592Q92610 1267 aa8.59□□□□□ -1.03
RBM39-234ENST00000487604 A0A1W2PRU2 124 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms