RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 USP19O94966 1318 aa17.7■□□□□ 0.42
TRIM56-204ENST00000487252 ITSN1Q15811 1721 aa17.69■□□□□ 0.42
TRIM56-204ENST00000487252 WASLO00401 505 aaPredicted RBP17.69■□□□□ 0.42
TRIM56-204ENST00000487252 CFAP70Q5T0N1 1121 aa17.69■□□□□ 0.42
TRIM56-204ENST00000487252 HIRIP3Q9BW71 556 aaPredicted RBP17.69■□□□□ 0.42
TRIM56-204ENST00000487252 POGKQ9P215 609 aa17.69■□□□□ 0.42
TRIM56-204ENST00000487252 TOPAZ1Q8N9V7 1692 aa17.68■□□□□ 0.42
TRIM56-204ENST00000487252 SLC34A2O95436 690 aa17.68■□□□□ 0.42
TRIM56-204ENST00000487252 QSER1Q2KHR3 1735 aa17.68■□□□□ 0.42
TRIM56-204ENST00000487252 NLGN2Q8NFZ4 835 aa17.68■□□□□ 0.42
TRIM56-204ENST00000487252 PRELPP51888 382 aa17.67■□□□□ 0.42
TRIM56-204ENST00000487252 COL13A1Q5TAT6 717 aaPredicted RBP17.67■□□□□ 0.42
TRIM56-204ENST00000487252 NUTM2GQ5VZR2 741 aa17.67■□□□□ 0.42
TRIM56-204ENST00000487252 PELP1Q8IZL8 1130 aaKnown RBP17.67■□□□□ 0.42
TRIM56-204ENST00000487252 SLC4A1APQ9BWU0 796 aaKnown RBP17.67■□□□□ 0.42
TRIM56-204ENST00000487252 SLC16A10Q8TF71 515 aa17.66■□□□□ 0.42
TRIM56-204ENST00000487252 ADGRB1O14514 1584 aa17.66■□□□□ 0.42
TRIM56-204ENST00000487252 POLR3AO14802 1390 aaPredicted RBP17.66■□□□□ 0.42
TRIM56-204ENST00000487252 APLP1P51693 650 aa17.65■□□□□ 0.42
TRIM56-204ENST00000487252 ZNF827Q17R98 1081 aa17.64■□□□□ 0.41
TRIM56-204ENST00000487252 NHSQ6T4R5 1651 aa17.64■□□□□ 0.41
TRIM56-204ENST00000487252 MINK1Q8N4C8 1332 aaPredicted RBP17.63■□□□□ 0.41
TRIM56-204ENST00000487252 GCP02774 474 aa17.62■□□□□ 0.41
TRIM56-204ENST00000487252 CDCA7Q9BWT1 371 aaPredicted RBP17.62■□□□□ 0.41
TRIM56-204ENST00000487252 KIF3CO14782 793 aa17.61■□□□□ 0.41
TRIM56-204ENST00000487252 POLD1P28340 1107 aa17.61■□□□□ 0.41
TRIM56-204ENST00000487252 KLHL34Q8N239 644 aa17.61■□□□□ 0.41
TRIM56-204ENST00000487252 COL18A1P39060 1754 aa17.61■□□□□ 0.41
TRIM56-204ENST00000487252 CAPN15O75808 1086 aa17.6■□□□□ 0.41
TRIM56-204ENST00000487252 NUDT16Q96DE0 195 aaKnown RBP17.6■□□□□ 0.41
TRIM56-204ENST00000487252 ABTB2Q8N961 1025 aa17.59■□□□□ 0.41
TRIM56-204ENST00000487252 AKT1S1Q96B36 256 aa17.59■□□□□ 0.41
TRIM56-204ENST00000487252 PCNTO95613 3336 aa17.59■□□□□ 0.41
TRIM56-204ENST00000487252 ACEP12821 1306 aa17.57■□□□□ 0.4
TRIM56-204ENST00000487252 LRRC4BQ9NT99 713 aa17.57■□□□□ 0.4
TRIM56-204ENST00000487252 PNPLA7Q6ZV29 1317 aa17.56■□□□□ 0.4
TRIM56-204ENST00000487252 WDR17Q8IZU2 1322 aa17.56■□□□□ 0.4
TRIM56-204ENST00000487252 TOM1L2Q6ZVM7 507 aa17.56■□□□□ 0.4
TRIM56-204ENST00000487252 JMYQ8N9B5 988 aa17.56■□□□□ 0.4
TRIM56-204ENST00000487252 ZNF526Q8TF50 670 aaPredicted RBP17.56■□□□□ 0.4
TRIM56-204ENST00000487252 TRAK1Q9UPV9 953 aa17.56■□□□□ 0.4
TRIM56-204ENST00000487252 TUBGCP6Q96RT7 1819 aa17.56■□□□□ 0.4
TRIM56-204ENST00000487252 ARHGEF28Q8N1W1 1705 aaKnown RBP17.55■□□□□ 0.4
TRIM56-204ENST00000487252 NLRP13Q86W25 1043 aa17.55■□□□□ 0.4
TRIM56-204ENST00000487252 TNS4Q8IZW8 715 aa17.55■□□□□ 0.4
TRIM56-204ENST00000487252 BTAF1O14981 1849 aa17.55■□□□□ 0.4
TRIM56-204ENST00000487252 PLEKHG3A1L390 1219 aa17.54■□□□□ 0.4
TRIM56-204ENST00000487252 BRD4O60885 1362 aaPredicted RBP17.53■□□□□ 0.4
TRIM56-204ENST00000487252 WDR90Q96KV7 1748 aa17.52■□□□□ 0.4
TRIM56-204ENST00000487252 SLIT3O75094 1523 aa17.52■□□□□ 0.4
TRIM56-204ENST00000487252 AXIN2Q9Y2T1 843 aa17.52■□□□□ 0.4
TRIM56-204ENST00000487252 TNS2Q63HR2 1409 aa17.52■□□□□ 0.4
TRIM56-204ENST00000487252 TRPM1Q7Z4N2 1603 aa17.51■□□□□ 0.39
TRIM56-204ENST00000487252 EXOC5O00471 708 aa17.51■□□□□ 0.39
TRIM56-204ENST00000487252 CARD10Q9BWT7 1032 aa17.51■□□□□ 0.39
TRIM56-204ENST00000487252 USP6P35125 1406 aa17.5■□□□□ 0.39
TRIM56-204ENST00000487252 CCDC61Q9Y6R9 512 aa17.5■□□□□ 0.39
TRIM56-204ENST00000487252 ABCC6O95255 1503 aa17.5■□□□□ 0.39
TRIM56-204ENST00000487252 KLRG1Q96E93 195 aa17.49■□□□□ 0.39
TRIM56-204ENST00000487252 TOMM70O94826 608 aa17.48■□□□□ 0.39
TRIM56-204ENST00000487252 SLC27A3Q5K4L6 730 aa17.47■□□□□ 0.39
TRIM56-204ENST00000487252 PCDH10Q9P2E7 1040 aa17.47■□□□□ 0.39
TRIM56-204ENST00000487252 CD2APQ9Y5K6 639 aa17.47■□□□□ 0.39
TRIM56-204ENST00000487252 RGPD5Q99666 1765 aa17.46■□□□□ 0.39
TRIM56-204ENST00000487252 ACSBG1Q96GR2 724 aa17.46■□□□□ 0.39
TRIM56-204ENST00000487252 CDK19Q9BWU1 502 aa17.46■□□□□ 0.39
TRIM56-204ENST00000487252 CCDC7Q96M83 1385 aa17.44■□□□□ 0.38
TRIM56-204ENST00000487252 TFCP2L1Q9NZI6 479 aa17.44■□□□□ 0.38
TRIM56-204ENST00000487252 CPSF1Q10570 1443 aaKnown RBP17.44■□□□□ 0.38
TRIM56-204ENST00000487252 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
TRIM56-204ENST00000487252 MPHOSPH9Q99550 1183 aa17.42■□□□□ 0.38
TRIM56-204ENST00000487252 CICQ96RK0 1608 aaPredicted RBP17.42■□□□□ 0.38
TRIM56-204ENST00000487252 ZBTB7CA1YPR0 619 aa17.41■□□□□ 0.38
TRIM56-204ENST00000487252 ARHGEF25Q86VW2 580 aa17.41■□□□□ 0.38
TRIM56-204ENST00000487252 LY75O60449 1722 aa17.41■□□□□ 0.38
TRIM56-204ENST00000487252 NLRP6P59044 892 aa17.4■□□□□ 0.38
TRIM56-204ENST00000487252 PIK3C2AO00443 1686 aa17.39■□□□□ 0.37
TRIM56-204ENST00000487252 HTRA3P83110 453 aa17.38■□□□□ 0.37
TRIM56-204ENST00000487252 COL23A1Q86Y22 540 aaPredicted RBP17.38■□□□□ 0.37
TRIM56-204ENST00000487252 WWC3Q9ULE0 1092 aa17.38■□□□□ 0.37
TRIM56-204ENST00000487252 KAT6BQ8WYB5 2073 aa17.37■□□□□ 0.37
TRIM56-204ENST00000487252 RBM46Q8TBY0 533 aaKnown RBP17.36■□□□□ 0.37
TRIM56-204ENST00000487252 CSB-PGBD3P0DP91 1061 aa17.35■□□□□ 0.37
TRIM56-204ENST00000487252 KCNQ4P56696 695 aa17.35■□□□□ 0.37
TRIM56-204ENST00000487252 IGSF1Q8N6C5 1336 aa17.32■□□□□ 0.36
TRIM56-204ENST00000487252 MSL1Q68DK7 614 aa17.32■□□□□ 0.36
TRIM56-204ENST00000487252 NMRK2Q9NPI5 230 aa17.32■□□□□ 0.36
TRIM56-204ENST00000487252 NFAT5O94916 1531 aa17.31■□□□□ 0.36
TRIM56-204ENST00000487252 MSH5O43196 834 aa17.31■□□□□ 0.36
TRIM56-204ENST00000487252 FSTL1Q12841 308 aa17.31■□□□□ 0.36
TRIM56-204ENST00000487252 IL2RBP14784 551 aa17.3■□□□□ 0.36
TRIM56-204ENST00000487252 KCNH5Q8NCM2 988 aa17.3■□□□□ 0.36
TRIM56-204ENST00000487252 NSD2O96028 1365 aa17.29■□□□□ 0.36
TRIM56-204ENST00000487252 QRICH2Q9H0J4 1663 aa17.28■□□□□ 0.36
TRIM56-204ENST00000487252 ERBB3P21860 1342 aa17.27■□□□□ 0.36
TRIM56-204ENST00000487252 USP54Q70EL1 1684 aa17.27■□□□□ 0.36
TRIM56-204ENST00000487252 HSPA1AP0DMV8 641 aaKnown RBP17.27■□□□□ 0.36
TRIM56-204ENST00000487252 HSPA1BP0DMV9 641 aaKnown RBP17.27■□□□□ 0.36
TRIM56-204ENST00000487252 STAC3Q96MF2 364 aa17.26■□□□□ 0.35
TRIM56-204ENST00000487252 ANKRD36BQ8N2N9 1353 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms