RNA–Protein interactions for RNA: ENST00000487163.5

USP21-208, Transcript of ubiquitin specific peptidase 21, humanhuman

TSL 1 (best)

Gene USP21, Length 2,514 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP21-208ENST00000487163 AKAP12Q02952 1782 aa21.4■■□□□ 1.02
USP21-208ENST00000487163 ELL2O00472 640 aaPredicted RBP21.4■■□□□ 1.02
USP21-208ENST00000487163 TSPYL6Q8N831 410 aa21.4■■□□□ 1.02
USP21-208ENST00000487163 SLC26A8Q96RN1 970 aa21.4■■□□□ 1.02
USP21-208ENST00000487163 C3P01024 1663 aa21.4■■□□□ 1.02
USP21-208ENST00000487163 ZNF692Q9BU19 519 aaPredicted RBP21.38■■□□□ 1.01
USP21-208ENST00000487163 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.38■■□□□ 1.01
USP21-208ENST00000487163 FAM83GA6ND36 823 aa21.38■■□□□ 1.01
USP21-208ENST00000487163 IPO8O15397 1037 aaKnown RBP21.38■■□□□ 1.01
USP21-208ENST00000487163 ALDH1L2Q3SY69 923 aa21.38■■□□□ 1.01
USP21-208ENST00000487163 DLG5Q8TDM6 1919 aa21.37■■□□□ 1.01
USP21-208ENST00000487163 ZBTB40Q9NUA8 1239 aa21.37■■□□□ 1.01
USP21-208ENST00000487163 ACEP12821 1306 aa21.36■■□□□ 1.01
USP21-208ENST00000487163 MBIPQ9NS73 344 aa21.36■■□□□ 1.01
USP21-208ENST00000487163 VAMP4O75379 141 aa21.36■■□□□ 1.01
USP21-208ENST00000487163 DCTN1Q14203 1278 aa21.36■■□□□ 1.01
USP21-208ENST00000487163 HDAC1Q13547 482 aaPredicted RBP21.35■■□□□ 1.01
USP21-208ENST00000487163 TTC21BQ7Z4L5 1316 aa21.35■■□□□ 1.01
USP21-208ENST00000487163 GNAI1P63096 354 aa21.34■■□□□ 1.01
USP21-208ENST00000487163 AEBP1Q8IUX7 1158 aa21.34■■□□□ 1.01
USP21-208ENST00000487163 IFT57Q9NWB7 429 aa21.34■■□□□ 1.01
USP21-208ENST00000487163 SOX12O15370 315 aa21.33■■□□□ 1.01
USP21-208ENST00000487163 USP35Q9P2H5 1018 aa21.33■■□□□ 1.01
USP21-208ENST00000487163 CALD1Q05682 793 aaKnown RBP21.33■■□□□ 1
USP21-208ENST00000487163 PLEKHG1Q9ULL1 1385 aa21.33■■□□□ 1
USP21-208ENST00000487163 ZNF853P0CG23 659 aa21.32■■□□□ 1
USP21-208ENST00000487163 PTPRUQ92729 1446 aa21.32■■□□□ 1
USP21-208ENST00000487163 EIF4A2Q14240 407 aaKnown RBP21.31■■□□□ 1
USP21-208ENST00000487163 NFKBIBQ15653 356 aa21.31■■□□□ 1
USP21-208ENST00000487163 MRPL50Q8N5N7 158 aaKnown RBP21.31■■□□□ 1
USP21-208ENST00000487163 C8orf58Q8NAV2 365 aa21.31■■□□□ 1
USP21-208ENST00000487163 ZNF428Q96B54 188 aa21.31■■□□□ 1
USP21-208ENST00000487163 SULT6B1Q6IMI4 303 aa21.3■■□□□ 1
USP21-208ENST00000487163 SMC5Q8IY18 1101 aa21.3■■□□□ 1
USP21-208ENST00000487163 TWISTNBQ3B726 338 aaPredicted RBP21.3■■□□□ 1
USP21-208ENST00000487163 CFAP44Q96MT7 982 aa21.3■■□□□ 1
USP21-208ENST00000487163 BRPF1P55201 1214 aaPredicted RBP21.29■■□□□ 1
USP21-208ENST00000487163 TRHP20396 242 aaPredicted RBP21.29■■□□□ 1
USP21-208ENST00000487163 NRKQ7Z2Y5 1582 aa21.28■■□□□ 1
USP21-208ENST00000487163 HSP90AB2PQ58FF8 381 aa21.28■■□□□ 1
USP21-208ENST00000487163 EID1Q9Y6B2 187 aa21.28■■□□□ 1
USP21-208ENST00000487163 PLEKHG3A1L390 1219 aa21.28■■□□□ 1
USP21-208ENST00000487163 LMOD3Q0VAK6 560 aa21.28■■□□□ 1
USP21-208ENST00000487163 C1orf115Q9H7X2 142 aa21.28■■□□□ 1
USP21-208ENST00000487163 AMOTL2Q9Y2J4 779 aa21.28■■□□□ 1
USP21-208ENST00000487163 USP6P35125 1406 aa21.28■■□□□ 1
USP21-208ENST00000487163 TOPAZ1Q8N9V7 1692 aa21.27■■□□□ 1
USP21-208ENST00000487163 UPF2Q9HAU5 1272 aaKnown RBP21.27■■□□□ 1
USP21-208ENST00000487163 OVOS2A0A0J9YW53 1432 aa21.27■■□□□ 1
USP21-208ENST00000487163 OVOS2Q6IE36 1432 aa21.27■■□□□ 1
USP21-208ENST00000487163 TBC1D32Q96NH3 1257 aa21.26■□□□□ 0.99
USP21-208ENST00000487163 ZBTB7BO15156 539 aaPredicted RBP21.26■□□□□ 0.99
USP21-208ENST00000487163 LNPKQ9C0E8 428 aa21.25■□□□□ 0.99
USP21-208ENST00000487163 PTCH1Q13635 1447 aa21.24■□□□□ 0.99
USP21-208ENST00000487163 PEAK1Q9H792 1746 aa21.24■□□□□ 0.99
USP21-208ENST00000487163 KRT24Q2M2I5 525 aa21.23■□□□□ 0.99
USP21-208ENST00000487163 ARHGAP45Q92619 1136 aa21.23■□□□□ 0.99
USP21-208ENST00000487163 MCM10Q7L590 875 aa21.23■□□□□ 0.99
USP21-208ENST00000487163 NUCB1Q02818 461 aa21.22■□□□□ 0.99
USP21-208ENST00000487163 MFAP1P55081 439 aaKnown RBP21.21■□□□□ 0.99
USP21-208ENST00000487163 RGPD8O14715 1765 aaPredicted RBP21.21■□□□□ 0.99
USP21-208ENST00000487163 FRAT2O75474 233 aaPredicted RBP21.21■□□□□ 0.99
USP21-208ENST00000487163 BECN1Q14457 450 aa21.21■□□□□ 0.99
USP21-208ENST00000487163 ABCC4O15439 1325 aa21.2■□□□□ 0.99
USP21-208ENST00000487163 PIK3R4Q99570 1358 aa21.2■□□□□ 0.98
USP21-208ENST00000487163 SLKQ9H2G2 1235 aaPredicted RBP21.2■□□□□ 0.98
USP21-208ENST00000487163 NALCNQ8IZF0 1738 aa21.2■□□□□ 0.98
USP21-208ENST00000487163 CHD1LQ86WJ1 897 aa21.19■□□□□ 0.98
USP21-208ENST00000487163 SSH2Q76I76 1423 aa21.19■□□□□ 0.98
USP21-208ENST00000487163 NGDNQ8NEJ9 315 aaKnown RBP21.19■□□□□ 0.98
USP21-208ENST00000487163 TBX22Q9Y458 520 aa21.19■□□□□ 0.98
USP21-208ENST00000487163 MAP3K19Q56UN5 1328 aa21.19■□□□□ 0.98
USP21-208ENST00000487163 USP31Q70CQ4 1352 aa21.18■□□□□ 0.98
USP21-208ENST00000487163 SIRT2Q8IXJ6 389 aa21.18■□□□□ 0.98
USP21-208ENST00000487163 SLIT1O75093 1534 aa21.18■□□□□ 0.98
USP21-208ENST00000487163 ARHGAP23Q9P227 1491 aa21.17■□□□□ 0.98
USP21-208ENST00000487163 ANKRD45Q5TZF3 282 aa21.17■□□□□ 0.98
USP21-208ENST00000487163 TBC1D2Q9BYX2 928 aa21.16■□□□□ 0.98
USP21-208ENST00000487163 FOXO3O43524 673 aa21.16■□□□□ 0.98
USP21-208ENST00000487163 C22orf23Q9BZE7 217 aa21.16■□□□□ 0.98
USP21-208ENST00000487163 API5Q9BZZ5 524 aaKnown RBP21.15■□□□□ 0.98
USP21-208ENST00000487163 FER1L4A9Z1Z3 1794 aa21.15■□□□□ 0.98
USP21-208ENST00000487163 THEMISQ8N1K5 641 aaPredicted RBP21.15■□□□□ 0.98
USP21-208ENST00000487163 RGPD1P0DJD0 1748 aa21.15■□□□□ 0.98
USP21-208ENST00000487163 CHL1O00533 1208 aa21.14■□□□□ 0.98
USP21-208ENST00000487163 MIS18AQ9NYP9 233 aa21.14■□□□□ 0.98
USP21-208ENST00000487163 DIP2AQ14689 1571 aa21.14■□□□□ 0.97
USP21-208ENST00000487163 CHMP4BQ9H444 224 aaKnown RBP21.14■□□□□ 0.97
USP21-208ENST00000487163 RIMS1Q86UR5 1692 aaKnown RBP21.14■□□□□ 0.97
USP21-208ENST00000487163 TTC21AQ8NDW8 1320 aa21.13■□□□□ 0.97
USP21-208ENST00000487163 NUTM2GQ5VZR2 741 aa21.13■□□□□ 0.97
USP21-208ENST00000487163 GCC1Q96CN9 775 aa21.12■□□□□ 0.97
USP21-208ENST00000487163 KCNA6P17658 529 aa21.12■□□□□ 0.97
USP21-208ENST00000487163 SPRYD3Q8NCJ5 442 aa21.12■□□□□ 0.97
USP21-208ENST00000487163 MTHFSDQ2M296 383 aaKnown RBP21.11■□□□□ 0.97
USP21-208ENST00000487163 AMPHP49418 695 aa21.11■□□□□ 0.97
USP21-208ENST00000487163 FMN2Q9NZ56 1722 aa21.11■□□□□ 0.97
USP21-208ENST00000487163 FLT4P35916 1363 aa21.1■□□□□ 0.97
USP21-208ENST00000487163 GSE1Q14687 1217 aa21.1■□□□□ 0.97
USP21-208ENST00000487163 NLRP6P59044 892 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms