RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 SHPRHQ149N8 1683 aa15.28■□□□□ 0.04
HSPG2-211ENST00000486901 PLEKHM2Q8IWE5 1019 aa15.28■□□□□ 0.04
HSPG2-211ENST00000486901 PRDM10Q9NQV6 1147 aa15.28■□□□□ 0.04
HSPG2-211ENST00000486901 ZNF830Q96NB3 372 aaPredicted RBP15.28■□□□□ 0.04
HSPG2-211ENST00000486901 CDK19Q9BWU1 502 aa15.28■□□□□ 0.04
HSPG2-211ENST00000486901 BCL11BQ9C0K0 894 aaPredicted RBP15.28■□□□□ 0.04
HSPG2-211ENST00000486901 CHD1O14646 1710 aa15.27■□□□□ 0.04
HSPG2-211ENST00000486901 SKOR2Q2VWA4 1001 aaPredicted RBP15.27■□□□□ 0.04
HSPG2-211ENST00000486901 ZSCAN30Q86W11 494 aa15.27■□□□□ 0.04
HSPG2-211ENST00000486901 TERF2IPQ9NYB0 399 aa15.27■□□□□ 0.03
HSPG2-211ENST00000486901 ANKRD36BQ8N2N9 1353 aa15.27■□□□□ 0.03
HSPG2-211ENST00000486901 NME9Q86XW9 330 aa15.26■□□□□ 0.03
HSPG2-211ENST00000486901 FANCAO15360 1455 aa15.26■□□□□ 0.03
HSPG2-211ENST00000486901 F6X3S4 739 aa15.26■□□□□ 0.03
HSPG2-211ENST00000486901 ZNF428Q96B54 188 aa15.26■□□□□ 0.03
HSPG2-211ENST00000486901 PTMAP06454 111 aaKnown RBP15.26■□□□□ 0.03
HSPG2-211ENST00000486901 CCDC173Q0VFZ6 552 aa15.26■□□□□ 0.03
HSPG2-211ENST00000486901 MCM10Q7L590 875 aa15.26■□□□□ 0.03
HSPG2-211ENST00000486901 SDSP20132 328 aa15.25■□□□□ 0.03
HSPG2-211ENST00000486901 GPT2Q8TD30 523 aa15.25■□□□□ 0.03
HSPG2-211ENST00000486901 POLKQ9UBT6 870 aa15.25■□□□□ 0.03
HSPG2-211ENST00000486901 ABCC1P33527 1531 aa15.25■□□□□ 0.03
HSPG2-211ENST00000486901 HDGFL2Q7Z4V5 671 aaPredicted RBP15.25■□□□□ 0.03
HSPG2-211ENST00000486901 KLHL40Q2TBA0 621 aa15.25■□□□□ 0.03
HSPG2-211ENST00000486901 FBXO31Q5XUX0 539 aaPredicted RBP15.25■□□□□ 0.03
HSPG2-211ENST00000486901 AEBP1Q8IUX7 1158 aa15.25■□□□□ 0.03
HSPG2-211ENST00000486901 CIZ1Q9ULV3 898 aaPredicted RBP15.25■□□□□ 0.03
HSPG2-211ENST00000486901 VGFO15240 615 aaPredicted RBP15.24■□□□□ 0.03
HSPG2-211ENST00000486901 NEK4P51957 841 aa15.24■□□□□ 0.03
HSPG2-211ENST00000486901 C17orf53Q8N3J3 647 aaPredicted RBP15.24■□□□□ 0.03
HSPG2-211ENST00000486901 GCC1Q96CN9 775 aa15.24■□□□□ 0.03
HSPG2-211ENST00000486901 UPF3BQ9BZI7 483 aaKnown RBP15.24■□□□□ 0.03
HSPG2-211ENST00000486901 MAP3K4Q9Y6R4 1608 aa15.24■□□□□ 0.03
HSPG2-211ENST00000486901 ADGRL1O94910 1474 aa15.24■□□□□ 0.03
HSPG2-211ENST00000486901 DNTTIP2Q5QJE6 756 aaKnown RBP15.24■□□□□ 0.03
HSPG2-211ENST00000486901 LMBRD1Q9NUN5 540 aa15.24■□□□□ 0.03
HSPG2-211ENST00000486901 MEIS3Q99687 375 aa15.24■□□□□ 0.03
HSPG2-211ENST00000486901 EXOC6BQ9Y2D4 811 aa15.24■□□□□ 0.03
HSPG2-211ENST00000486901 TMEM63CQ9P1W3 806 aa15.23■□□□□ 0.03
HSPG2-211ENST00000486901 MAP4K4O95819 1239 aaPredicted RBP15.23■□□□□ 0.03
HSPG2-211ENST00000486901 CT47B1P0C2W7 299 aaPredicted RBP15.23■□□□□ 0.03
HSPG2-211ENST00000486901 RILPL2Q969X0 211 aa15.23■□□□□ 0.03
HSPG2-211ENST00000486901 ZFYVE16Q7Z3T8 1539 aa15.22■□□□□ 0.03
HSPG2-211ENST00000486901 USP26Q9BXU7 913 aa15.22■□□□□ 0.03
HSPG2-211ENST00000486901 ABCC11Q96J66 1382 aa15.22■□□□□ 0.03
HSPG2-211ENST00000486901 UQCRHLA0A096LP55 91 aa15.21■□□□□ 0.03
HSPG2-211ENST00000486901 UQCRHP07919 91 aa15.21■□□□□ 0.03
HSPG2-211ENST00000486901 NFE2L2Q16236 605 aa15.21■□□□□ 0.03
HSPG2-211ENST00000486901 ZDHHC9Q9Y397 364 aa15.21■□□□□ 0.03
HSPG2-211ENST00000486901 NCOA3Q9Y6Q9 1424 aa15.21■□□□□ 0.03
HSPG2-211ENST00000486901 C14orf37Q86TY3 774 aa15.21■□□□□ 0.03
HSPG2-211ENST00000486901 TTC22Q5TAA0 569 aa15.21■□□□□ 0.02
HSPG2-211ENST00000486901 NPATQ14207 1427 aa15.21■□□□□ 0.02
HSPG2-211ENST00000486901 TRIM6-TRIM34B2RNG4 842 aa15.2■□□□□ 0.02
HSPG2-211ENST00000486901 ALDH1L2Q3SY69 923 aa15.2■□□□□ 0.02
HSPG2-211ENST00000486901 FCHSD2O94868 740 aa15.2■□□□□ 0.02
HSPG2-211ENST00000486901 ATP7AQ04656 1500 aa15.2■□□□□ 0.02
HSPG2-211ENST00000486901 RABEP1Q15276 862 aa15.19■□□□□ 0.02
HSPG2-211ENST00000486901 SHROOM2Q13796 1616 aa15.19■□□□□ 0.02
HSPG2-211ENST00000486901 MROH2AA6NES4 1674 aa15.19■□□□□ 0.02
HSPG2-211ENST00000486901 DDX54Q8TDD1 881 aaKnown RBP15.19■□□□□ 0.02
HSPG2-211ENST00000486901 GNAI1P63096 354 aa15.18■□□□□ 0.02
HSPG2-211ENST00000486901 ANO2Q9NQ90 1003 aa15.18■□□□□ 0.02
HSPG2-211ENST00000486901 PALD1Q9ULE6 856 aa15.18■□□□□ 0.02
HSPG2-211ENST00000486901 ST18O60284 1047 aa15.18■□□□□ 0.02
HSPG2-211ENST00000486901 OFD1O75665 1012 aa15.18■□□□□ 0.02
HSPG2-211ENST00000486901 INTS3Q68E01 1043 aaKnown RBP15.18■□□□□ 0.02
HSPG2-211ENST00000486901 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.18■□□□□ 0.02
HSPG2-211ENST00000486901 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.18■□□□□ 0.02
HSPG2-211ENST00000486901 SULT6B1Q6IMI4 303 aa15.17■□□□□ 0.02
HSPG2-211ENST00000486901 PPP1R9BQ96SB3 815 aa15.17■□□□□ 0.02
HSPG2-211ENST00000486901 SBNO2Q9Y2G9 1366 aa15.17■□□□□ 0.02
HSPG2-211ENST00000486901 GADD45BO75293 160 aaPredicted RBP15.17■□□□□ 0.02
HSPG2-211ENST00000486901 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
HSPG2-211ENST00000486901 NUCB2P80303 420 aa15.17■□□□□ 0.02
HSPG2-211ENST00000486901 G2E3Q7L622 706 aa15.17■□□□□ 0.02
HSPG2-211ENST00000486901 CHMP3Q9Y3E7 222 aa15.17■□□□□ 0.02
HSPG2-211ENST00000486901 TULP4Q9NRJ4 1543 aa15.17■□□□□ 0.02
HSPG2-211ENST00000486901 TPM2P07951 284 aa15.16■□□□□ 0.02
HSPG2-211ENST00000486901 FOXO3O43524 673 aa15.16■□□□□ 0.02
HSPG2-211ENST00000486901 ZMYM3Q14202 1370 aa15.15■□□□□ 0.02
HSPG2-211ENST00000486901 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.15■□□□□ 0.02
HSPG2-211ENST00000486901 DCTPP1Q9H773 170 aa15.15■□□□□ 0.02
HSPG2-211ENST00000486901 IL1RAPL2Q9NP60 686 aa15.15■□□□□ 0.02
HSPG2-211ENST00000486901 ISY1Q9ULR0 285 aaKnown RBP15.15■□□□□ 0.02
HSPG2-211ENST00000486901 MYOM2P54296 1465 aa15.15■□□□□ 0.02
HSPG2-211ENST00000486901 QRICH2Q9H0J4 1663 aa15.15■□□□□ 0.02
HSPG2-211ENST00000486901 ZCCHC11Q5TAX3 1644 aaKnown RBP15.15■□□□□ 0.02
HSPG2-211ENST00000486901 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.15■□□□□ 0.02
HSPG2-211ENST00000486901 TMX3Q96JJ7 454 aa15.15■□□□□ 0.02
HSPG2-211ENST00000486901 IL16Q14005 1332 aa15.14■□□□□ 0.01
HSPG2-211ENST00000486901 CASC1Q6TDU7 716 aa15.14■□□□□ 0.01
HSPG2-211ENST00000486901 TXNDC2Q86VQ3 553 aa15.14■□□□□ 0.01
HSPG2-211ENST00000486901 API5Q9BZZ5 524 aaKnown RBP15.14■□□□□ 0.01
HSPG2-211ENST00000486901 CEP85Q6P2H3 762 aa15.14■□□□□ 0.01
HSPG2-211ENST00000486901 PDCL3Q9H2J4 239 aa15.14■□□□□ 0.01
HSPG2-211ENST00000486901 TET3O43151 1660 aa15.14■□□□□ 0.01
HSPG2-211ENST00000486901 ZHX1Q9UKY1 873 aaPredicted RBP15.13■□□□□ 0.01
HSPG2-211ENST00000486901 TTC12Q9H892 705 aaPredicted RBP15.13■□□□□ 0.01
HSPG2-211ENST00000486901 OSCARQ8IYS5 282 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms