RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PLEKHG1Q9ULL1 1385 aa22.95■■□□□ 1.26
PDLIM7-207ENST00000486828 KIF16BQ96L93 1317 aa22.94■■□□□ 1.26
PDLIM7-207ENST00000486828 PRR36Q9H6K5 1346 aa22.94■■□□□ 1.26
PDLIM7-207ENST00000486828 HMOX1P09601 288 aa22.94■■□□□ 1.26
PDLIM7-207ENST00000486828 ALDH1L2Q3SY69 923 aa22.94■■□□□ 1.26
PDLIM7-207ENST00000486828 NOB1Q9ULX3 412 aaKnown RBP22.94■■□□□ 1.26
PDLIM7-207ENST00000486828 DDX19BQ9UMR2 479 aa22.94■■□□□ 1.26
PDLIM7-207ENST00000486828 PDZRN3Q9UPQ7 1066 aa22.94■■□□□ 1.26
PDLIM7-207ENST00000486828 PHACTR3Q96KR7 559 aa22.93■■□□□ 1.26
PDLIM7-207ENST00000486828 LAS1LQ9Y4W2 734 aaKnown RBP22.92■■□□□ 1.26
PDLIM7-207ENST00000486828 CALD1Q05682 793 aaKnown RBP22.92■■□□□ 1.26
PDLIM7-207ENST00000486828 ZNF428Q96B54 188 aa22.92■■□□□ 1.26
PDLIM7-207ENST00000486828 BCL11AQ9H165 835 aa22.92■■□□□ 1.26
PDLIM7-207ENST00000486828 IPO8O15397 1037 aaKnown RBP22.91■■□□□ 1.26
PDLIM7-207ENST00000486828 ANKLE2Q86XL3 938 aa22.91■■□□□ 1.26
PDLIM7-207ENST00000486828 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.91■■□□□ 1.26
PDLIM7-207ENST00000486828 TOPAZ1Q8N9V7 1692 aa22.9■■□□□ 1.26
PDLIM7-207ENST00000486828 DEKP35659 375 aaKnown RBP22.9■■□□□ 1.26
PDLIM7-207ENST00000486828 ITPRIPQ8IWB1 547 aa22.9■■□□□ 1.26
PDLIM7-207ENST00000486828 NRKQ7Z2Y5 1582 aa22.89■■□□□ 1.26
PDLIM7-207ENST00000486828 DAXXQ9UER7 740 aaPredicted RBP22.89■■□□□ 1.25
PDLIM7-207ENST00000486828 BRPF1P55201 1214 aaPredicted RBP22.88■■□□□ 1.25
PDLIM7-207ENST00000486828 HDAC1Q13547 482 aaPredicted RBP22.88■■□□□ 1.25
PDLIM7-207ENST00000486828 USP19O94966 1318 aa22.88■■□□□ 1.25
PDLIM7-207ENST00000486828 RRS1Q15050 365 aaKnown RBP22.88■■□□□ 1.25
PDLIM7-207ENST00000486828 USP35Q9P2H5 1018 aa22.88■■□□□ 1.25
PDLIM7-207ENST00000486828 TMEM57Q8N5G2 664 aa22.87■■□□□ 1.25
PDLIM7-207ENST00000486828 IFT57Q9NWB7 429 aa22.87■■□□□ 1.25
PDLIM7-207ENST00000486828 GNAI1P63096 354 aa22.86■■□□□ 1.25
PDLIM7-207ENST00000486828 LMOD3Q0VAK6 560 aa22.85■■□□□ 1.25
PDLIM7-207ENST00000486828 PLEKHG3A1L390 1219 aa22.84■■□□□ 1.25
PDLIM7-207ENST00000486828 ZNF853P0CG23 659 aa22.84■■□□□ 1.25
PDLIM7-207ENST00000486828 SLC4A3P48751 1232 aa22.84■■□□□ 1.25
PDLIM7-207ENST00000486828 TTC21BQ7Z4L5 1316 aa22.84■■□□□ 1.25
PDLIM7-207ENST00000486828 SEC24BO95487 1268 aa22.84■■□□□ 1.25
PDLIM7-207ENST00000486828 THUMPD2Q9BTF0 503 aaKnown RBP22.84■■□□□ 1.25
PDLIM7-207ENST00000486828 ZBTB40Q9NUA8 1239 aa22.84■■□□□ 1.25
PDLIM7-207ENST00000486828 PTPRUQ92729 1446 aa22.83■■□□□ 1.25
PDLIM7-207ENST00000486828 ACEP12821 1306 aa22.83■■□□□ 1.25
PDLIM7-207ENST00000486828 DLG5Q8TDM6 1919 aa22.83■■□□□ 1.25
PDLIM7-207ENST00000486828 OVOS2A0A0J9YW53 1432 aa22.83■■□□□ 1.24
PDLIM7-207ENST00000486828 OVOS2Q6IE36 1432 aa22.83■■□□□ 1.24
PDLIM7-207ENST00000486828 VAMP4O75379 141 aa22.82■■□□□ 1.24
PDLIM7-207ENST00000486828 USP6P35125 1406 aa22.82■■□□□ 1.24
PDLIM7-207ENST00000486828 SLC26A8Q96RN1 970 aa22.8■■□□□ 1.24
PDLIM7-207ENST00000486828 MBIPQ9NS73 344 aa22.8■■□□□ 1.24
PDLIM7-207ENST00000486828 NALCNQ8IZF0 1738 aa22.8■■□□□ 1.24
PDLIM7-207ENST00000486828 MRPL50Q8N5N7 158 aaKnown RBP22.8■■□□□ 1.24
PDLIM7-207ENST00000486828 ARHGAP45Q92619 1136 aa22.8■■□□□ 1.24
PDLIM7-207ENST00000486828 PTCH1Q13635 1447 aa22.79■■□□□ 1.24
PDLIM7-207ENST00000486828 SMC5Q8IY18 1101 aa22.79■■□□□ 1.24
PDLIM7-207ENST00000486828 CFAP44Q96MT7 982 aa22.79■■□□□ 1.24
PDLIM7-207ENST00000486828 NPHP4O75161 1426 aaPredicted RBP22.78■■□□□ 1.24
PDLIM7-207ENST00000486828 PIK3R4Q99570 1358 aa22.78■■□□□ 1.24
PDLIM7-207ENST00000486828 TSPYL6Q8N831 410 aa22.78■■□□□ 1.24
PDLIM7-207ENST00000486828 EIF4A2Q14240 407 aaKnown RBP22.77■■□□□ 1.24
PDLIM7-207ENST00000486828 STRCQ7RTU9 1775 aa22.77■■□□□ 1.24
PDLIM7-207ENST00000486828 TBX22Q9Y458 520 aa22.76■■□□□ 1.23
PDLIM7-207ENST00000486828 SSH2Q76I76 1423 aa22.76■■□□□ 1.23
PDLIM7-207ENST00000486828 USP31Q70CQ4 1352 aa22.76■■□□□ 1.23
PDLIM7-207ENST00000486828 UPF2Q9HAU5 1272 aaKnown RBP22.76■■□□□ 1.23
PDLIM7-207ENST00000486828 AMOTL2Q9Y2J4 779 aa22.75■■□□□ 1.23
PDLIM7-207ENST00000486828 NUTM2FA1L443 756 aa22.74■■□□□ 1.23
PDLIM7-207ENST00000486828 DIP2AQ14689 1571 aa22.74■■□□□ 1.23
PDLIM7-207ENST00000486828 TWISTNBQ3B726 338 aaPredicted RBP22.74■■□□□ 1.23
PDLIM7-207ENST00000486828 CHMP4BQ9H444 224 aaKnown RBP22.74■■□□□ 1.23
PDLIM7-207ENST00000486828 PEAK1Q9H792 1746 aa22.74■■□□□ 1.23
PDLIM7-207ENST00000486828 FAM83GA6ND36 823 aa22.73■■□□□ 1.23
PDLIM7-207ENST00000486828 RGPD1P0DJD0 1748 aa22.73■■□□□ 1.23
PDLIM7-207ENST00000486828 SULT6B1Q6IMI4 303 aa22.72■■□□□ 1.23
PDLIM7-207ENST00000486828 TBC1D32Q96NH3 1257 aa22.72■■□□□ 1.23
PDLIM7-207ENST00000486828 ZBTB7BO15156 539 aaPredicted RBP22.72■■□□□ 1.23
PDLIM7-207ENST00000486828 AEBP1Q8IUX7 1158 aa22.72■■□□□ 1.23
PDLIM7-207ENST00000486828 ABCC4O15439 1325 aa22.71■■□□□ 1.23
PDLIM7-207ENST00000486828 TTC21AQ8NDW8 1320 aa22.71■■□□□ 1.23
PDLIM7-207ENST00000486828 C8orf58Q8NAV2 365 aa22.71■■□□□ 1.23
PDLIM7-207ENST00000486828 ELL2O00472 640 aaPredicted RBP22.7■■□□□ 1.23
PDLIM7-207ENST00000486828 NFKBIBQ15653 356 aa22.7■■□□□ 1.23
PDLIM7-207ENST00000486828 NUCB1Q02818 461 aa22.7■■□□□ 1.22
PDLIM7-207ENST00000486828 DCTN1Q14203 1278 aa22.7■■□□□ 1.22
PDLIM7-207ENST00000486828 BECN1Q14457 450 aa22.7■■□□□ 1.22
PDLIM7-207ENST00000486828 HSP90AB2PQ58FF8 381 aa22.68■■□□□ 1.22
PDLIM7-207ENST00000486828 API5Q9BZZ5 524 aaKnown RBP22.67■■□□□ 1.22
PDLIM7-207ENST00000486828 XRN1Q8IZH2 1706 aaKnown RBP22.67■■□□□ 1.22
PDLIM7-207ENST00000486828 ARHGEF10O15013 1369 aa22.66■■□□□ 1.22
PDLIM7-207ENST00000486828 FMN2Q9NZ56 1722 aa22.65■■□□□ 1.22
PDLIM7-207ENST00000486828 CHD1LQ86WJ1 897 aa22.64■■□□□ 1.21
PDLIM7-207ENST00000486828 GCC1Q96CN9 775 aa22.64■■□□□ 1.21
PDLIM7-207ENST00000486828 KIF24Q5T7B8 1368 aa22.64■■□□□ 1.21
PDLIM7-207ENST00000486828 CHL1O00533 1208 aa22.63■■□□□ 1.21
PDLIM7-207ENST00000486828 HAP1P54257 671 aaPredicted RBP22.63■■□□□ 1.21
PDLIM7-207ENST00000486828 MAP3K19Q56UN5 1328 aa22.63■■□□□ 1.21
PDLIM7-207ENST00000486828 RGPD8O14715 1765 aaPredicted RBP22.63■■□□□ 1.21
PDLIM7-207ENST00000486828 SBNO1A3KN83 1393 aa22.63■■□□□ 1.21
PDLIM7-207ENST00000486828 NGDNQ8NEJ9 315 aaKnown RBP22.63■■□□□ 1.21
PDLIM7-207ENST00000486828 FLT4P35916 1363 aa22.62■■□□□ 1.21
PDLIM7-207ENST00000486828 KIAA0232Q92628 1395 aa22.62■■□□□ 1.21
PDLIM7-207ENST00000486828 ANKARQ7Z5J8 1434 aa22.61■■□□□ 1.21
PDLIM7-207ENST00000486828 LNPKQ9C0E8 428 aa22.61■■□□□ 1.21
PDLIM7-207ENST00000486828 PIK3C2AO00443 1686 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms