RNA–Protein interactions for RNA: ENST00000486420.1

C9orf16-202, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-202ENST00000486420 BLMP54132 1417 aaPredicted RBP16.91■□□□□ 0.3
C9orf16-202ENST00000486420 GGNBP2Q9H3C7 697 aa16.9■□□□□ 0.3
C9orf16-202ENST00000486420 LMO7Q8WWI1 1683 aa16.89■□□□□ 0.29
C9orf16-202ENST00000486420 THRAP3Q9Y2W1 955 aaKnown RBP16.89■□□□□ 0.29
C9orf16-202ENST00000486420 THSD7AQ9UPZ6 1657 aa16.88■□□□□ 0.29
C9orf16-202ENST00000486420 MORC1Q86VD1 984 aa16.87■□□□□ 0.29
C9orf16-202ENST00000486420 IP6K1Q92551 441 aa16.87■□□□□ 0.29
C9orf16-202ENST00000486420 CCDC9Q9Y3X0 531 aaKnown RBP16.87■□□□□ 0.29
C9orf16-202ENST00000486420 ANKRD26Q9UPS8 1709 aa16.87■□□□□ 0.29
C9orf16-202ENST00000486420 SMG6Q86US8 1419 aaKnown RBP16.87■□□□□ 0.29
C9orf16-202ENST00000486420 AMPHP49418 695 aa16.86■□□□□ 0.29
C9orf16-202ENST00000486420 CHRNA2Q15822 529 aa16.86■□□□□ 0.29
C9orf16-202ENST00000486420 CDCA7Q9BWT1 371 aaPredicted RBP16.86■□□□□ 0.29
C9orf16-202ENST00000486420 ZBTB7CA1YPR0 619 aa16.85■□□□□ 0.29
C9orf16-202ENST00000486420 SOX12O15370 315 aa16.85■□□□□ 0.29
C9orf16-202ENST00000486420 PER1O15534 1290 aaPredicted RBP16.85■□□□□ 0.29
C9orf16-202ENST00000486420 ZRANB1Q9UGI0 708 aa16.85■□□□□ 0.29
C9orf16-202ENST00000486420 WDR17Q8IZU2 1322 aa16.85■□□□□ 0.29
C9orf16-202ENST00000486420 FLT4P35916 1363 aa16.85■□□□□ 0.29
C9orf16-202ENST00000486420 CRB1P82279 1406 aa16.85■□□□□ 0.29
C9orf16-202ENST00000486420 COL5A2P05997 1499 aaPredicted RBP16.85■□□□□ 0.29
C9orf16-202ENST00000486420 AMER1Q5JTC6 1135 aaPredicted RBP16.84■□□□□ 0.29
C9orf16-202ENST00000486420 SPATA31A5Q5VU36 1347 aa16.84■□□□□ 0.29
C9orf16-202ENST00000486420 SPATA31A7Q8IWB4 1347 aa16.84■□□□□ 0.29
C9orf16-202ENST00000486420 ONECUT3O60422 494 aaPredicted RBP16.83■□□□□ 0.28
C9orf16-202ENST00000486420 CSB-PGBD3P0DP91 1061 aa16.83■□□□□ 0.28
C9orf16-202ENST00000486420 STRN4Q9NRL3 753 aa16.83■□□□□ 0.28
C9orf16-202ENST00000486420 CAMTA1Q9Y6Y1 1673 aa16.83■□□□□ 0.28
C9orf16-202ENST00000486420 MAP3K19Q56UN5 1328 aa16.82■□□□□ 0.28
C9orf16-202ENST00000486420 BARGINQ6ZT62 677 aa16.82■□□□□ 0.28
C9orf16-202ENST00000486420 CCDC125Q86Z20 511 aa16.82■□□□□ 0.28
C9orf16-202ENST00000486420 SEPT12Q8IYM1 358 aa16.82■□□□□ 0.28
C9orf16-202ENST00000486420 INSRP06213 1382 aa16.81■□□□□ 0.28
C9orf16-202ENST00000486420 ERBB3P21860 1342 aa16.81■□□□□ 0.28
C9orf16-202ENST00000486420 SPATA31A1Q5TZJ5 1347 aa16.81■□□□□ 0.28
C9orf16-202ENST00000486420 TOM1L2Q6ZVM7 507 aa16.81■□□□□ 0.28
C9orf16-202ENST00000486420 TCP11L2Q8N4U5 519 aa16.81■□□□□ 0.28
C9orf16-202ENST00000486420 CARD10Q9BWT7 1032 aa16.81■□□□□ 0.28
C9orf16-202ENST00000486420 LTN1O94822 1766 aa16.81■□□□□ 0.28
C9orf16-202ENST00000486420 RGPD1P0DJD0 1748 aa16.81■□□□□ 0.28
C9orf16-202ENST00000486420 FAM208AQ9UK61 1670 aaKnown RBP16.81■□□□□ 0.28
C9orf16-202ENST00000486420 COL18A1P39060 1754 aa16.8■□□□□ 0.28
C9orf16-202ENST00000486420 ZNF316A6NFI3 1004 aaPredicted RBP16.8■□□□□ 0.28
C9orf16-202ENST00000486420 HOXC9P31274 260 aa16.8■□□□□ 0.28
C9orf16-202ENST00000486420 A0A0G2JS52 829 aa16.79■□□□□ 0.28
C9orf16-202ENST00000486420 MYT1Q01538 1121 aa16.79■□□□□ 0.28
C9orf16-202ENST00000486420 ANKRD24Q8TF21 1146 aa16.79■□□□□ 0.28
C9orf16-202ENST00000486420 WNK3Q9BYP7 1800 aa16.79■□□□□ 0.28
C9orf16-202ENST00000486420 FAM98CQ17RN3 349 aaKnown RBP16.78■□□□□ 0.28
C9orf16-202ENST00000486420 KRT27Q7Z3Y8 459 aa16.78■□□□□ 0.28
C9orf16-202ENST00000486420 PLEKHG2Q9H7P9 1386 aa16.77■□□□□ 0.28
C9orf16-202ENST00000486420 PARP4Q9UKK3 1724 aaKnown RBP16.77■□□□□ 0.28
C9orf16-202ENST00000486420 LARP1Q6PKG0 1096 aaKnown RBP16.77■□□□□ 0.28
C9orf16-202ENST00000486420 AXIN2Q9Y2T1 843 aa16.77■□□□□ 0.28
C9orf16-202ENST00000486420 RRS1Q15050 365 aaKnown RBP16.76■□□□□ 0.27
C9orf16-202ENST00000486420 POLKQ9UBT6 870 aa16.76■□□□□ 0.27
C9orf16-202ENST00000486420 NLRP2Q9NX02 1062 aa16.75■□□□□ 0.27
C9orf16-202ENST00000486420 TNS1Q9HBL0 1735 aaKnown RBP16.75■□□□□ 0.27
C9orf16-202ENST00000486420 PPM1GO15355 546 aaPredicted RBP16.74■□□□□ 0.27
C9orf16-202ENST00000486420 RALBP1Q15311 655 aa16.74■□□□□ 0.27
C9orf16-202ENST00000486420 CC2D1BQ5T0F9 858 aaKnown RBP16.74■□□□□ 0.27
C9orf16-202ENST00000486420 CFAP53Q96M91 514 aa16.74■□□□□ 0.27
C9orf16-202ENST00000486420 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
C9orf16-202ENST00000486420 SF3B2Q13435 895 aaKnown RBP16.73■□□□□ 0.27
C9orf16-202ENST00000486420 TNNT2P45379 298 aaPredicted RBP16.72■□□□□ 0.27
C9orf16-202ENST00000486420 DDX10Q13206 875 aaKnown RBP16.72■□□□□ 0.27
C9orf16-202ENST00000486420 EMILIN1Q9Y6C2 1016 aa16.72■□□□□ 0.27
C9orf16-202ENST00000486420 IL2RBP14784 551 aa16.71■□□□□ 0.27
C9orf16-202ENST00000486420 PDE3BQ13370 1112 aa16.71■□□□□ 0.27
C9orf16-202ENST00000486420 USP35Q9P2H5 1018 aa16.71■□□□□ 0.27
C9orf16-202ENST00000486420 LRRC37A3O60309 1634 aa16.7■□□□□ 0.26
C9orf16-202ENST00000486420 MAP2P11137 1827 aaKnown RBP16.7■□□□□ 0.26
C9orf16-202ENST00000486420 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
C9orf16-202ENST00000486420 EXOC5O00471 708 aa16.69■□□□□ 0.26
C9orf16-202ENST00000486420 DDB1Q16531 1140 aa16.69■□□□□ 0.26
C9orf16-202ENST00000486420 RAPGEF4Q8WZA2 1011 aa16.69■□□□□ 0.26
C9orf16-202ENST00000486420 LTV1Q96GA3 475 aaPredicted RBP16.68■□□□□ 0.26
C9orf16-202ENST00000486420 DISP2A7MBM2 1401 aa16.68■□□□□ 0.26
C9orf16-202ENST00000486420 MTHFSP49914 203 aa16.67■□□□□ 0.26
C9orf16-202ENST00000486420 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
C9orf16-202ENST00000486420 PARD3Q8TEW0 1356 aa16.66■□□□□ 0.26
C9orf16-202ENST00000486420 TATP17735 454 aaPredicted RBP16.66■□□□□ 0.26
C9orf16-202ENST00000486420 FBLN1P23142 703 aa16.66■□□□□ 0.26
C9orf16-202ENST00000486420 BAG6P46379 1132 aa16.66■□□□□ 0.26
C9orf16-202ENST00000486420 PEAK1Q9H792 1746 aa16.65■□□□□ 0.26
C9orf16-202ENST00000486420 DIAPH1O60610 1272 aaKnown RBP16.65■□□□□ 0.26
C9orf16-202ENST00000486420 FAM196AQ6ZSG2 479 aa16.65■□□□□ 0.26
C9orf16-202ENST00000486420 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.65■□□□□ 0.26
C9orf16-202ENST00000486420 OVOS2A0A0G2JMS6 1433 aa16.64■□□□□ 0.25
C9orf16-202ENST00000486420 NCAPD2Q15021 1401 aa16.64■□□□□ 0.25
C9orf16-202ENST00000486420 TNS2Q63HR2 1409 aa16.64■□□□□ 0.25
C9orf16-202ENST00000486420 EIF4A2Q14240 407 aaKnown RBP16.64■□□□□ 0.25
C9orf16-202ENST00000486420 BCL9O00512 1426 aa16.63■□□□□ 0.25
C9orf16-202ENST00000486420 PPP2R1AP30153 589 aa16.63■□□□□ 0.25
C9orf16-202ENST00000486420 NBPF6Q5VWK0 638 aa16.63■□□□□ 0.25
C9orf16-202ENST00000486420 DEFB132Q7Z7B7 95 aa16.63■□□□□ 0.25
C9orf16-202ENST00000486420 NBPF4Q96M43 638 aa16.63■□□□□ 0.25
C9orf16-202ENST00000486420 RGPD3A6NKT7 1758 aaPredicted RBP16.63■□□□□ 0.25
C9orf16-202ENST00000486420 RGPD4Q7Z3J3 1758 aa16.63■□□□□ 0.25
C9orf16-202ENST00000486420 IGSF1Q8N6C5 1336 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms