RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 SSH1Q8WYL5 1049 aa16.49■□□□□ 0.23
PKD1-219ENST00000486339 SYAP1Q96A49 352 aaPredicted RBP16.49■□□□□ 0.23
PKD1-219ENST00000486339 CHMP4CQ96CF2 233 aa16.49■□□□□ 0.23
PKD1-219ENST00000486339 FOXD4L5Q5VV16 416 aaPredicted RBP16.49■□□□□ 0.23
PKD1-219ENST00000486339 FOXD4L4Q8WXT5 416 aaPredicted RBP16.49■□□□□ 0.23
PKD1-219ENST00000486339 RARSP54136 660 aaKnown RBP16.48■□□□□ 0.23
PKD1-219ENST00000486339 HSP90AB2PQ58FF8 381 aa16.48■□□□□ 0.23
PKD1-219ENST00000486339 PTCD1O75127 700 aaKnown RBP16.48■□□□□ 0.23
PKD1-219ENST00000486339 MPRIPQ6WCQ1 1025 aa16.48■□□□□ 0.23
PKD1-219ENST00000486339 FANCIQ9NVI1 1328 aa16.48■□□□□ 0.23
PKD1-219ENST00000486339 ASXL1Q8IXJ9 1541 aa16.48■□□□□ 0.23
PKD1-219ENST00000486339 FAM184AQ8NB25 1140 aa16.48■□□□□ 0.23
PKD1-219ENST00000486339 NPHP3Q7Z494 1330 aa16.47■□□□□ 0.23
PKD1-219ENST00000486339 YTHDC2Q9H6S0 1430 aaKnown RBP16.47■□□□□ 0.23
PKD1-219ENST00000486339 CPLX2Q6PUV4 134 aaKnown RBP16.47■□□□□ 0.23
PKD1-219ENST00000486339 C22orf23Q9BZE7 217 aa16.47■□□□□ 0.23
PKD1-219ENST00000486339 CSPP1Q1MSJ5 1256 aa16.47■□□□□ 0.23
PKD1-219ENST00000486339 ERC1Q8IUD2 1116 aa16.47■□□□□ 0.23
PKD1-219ENST00000486339 TMEM57Q8N5G2 664 aa16.47■□□□□ 0.23
PKD1-219ENST00000486339 TRDNQ13061 729 aa16.46■□□□□ 0.23
PKD1-219ENST00000486339 SYNE3Q6ZMZ3 975 aa16.46■□□□□ 0.23
PKD1-219ENST00000486339 AMOTL1Q8IY63 956 aa16.46■□□□□ 0.23
PKD1-219ENST00000486339 CNTROBQ8N137 903 aa16.46■□□□□ 0.23
PKD1-219ENST00000486339 C19orf44Q9H6X5 657 aa16.46■□□□□ 0.23
PKD1-219ENST00000486339 ARHGEF5Q12774 1597 aa16.46■□□□□ 0.22
PKD1-219ENST00000486339 CHRNA2Q15822 529 aa16.46■□□□□ 0.22
PKD1-219ENST00000486339 WASHC4Q2M389 1173 aa16.46■□□□□ 0.22
PKD1-219ENST00000486339 FSD1Q9BTV5 496 aa16.46■□□□□ 0.22
PKD1-219ENST00000486339 CHD1O14646 1710 aa16.45■□□□□ 0.22
PKD1-219ENST00000486339 ALDH1L2Q3SY69 923 aa16.45■□□□□ 0.22
PKD1-219ENST00000486339 H3BQV1 296 aa16.45■□□□□ 0.22
PKD1-219ENST00000486339 IFFO2Q5TF58 517 aa16.45■□□□□ 0.22
PKD1-219ENST00000486339 PHF23Q9BUL5 403 aaPredicted RBP16.45■□□□□ 0.22
PKD1-219ENST00000486339 TMOD3Q9NYL9 352 aa16.44■□□□□ 0.22
PKD1-219ENST00000486339 NKTRP30414 1462 aaKnown RBP16.44■□□□□ 0.22
PKD1-219ENST00000486339 YEATS2Q9ULM3 1422 aa16.44■□□□□ 0.22
PKD1-219ENST00000486339 ANKRD24Q8TF21 1146 aa16.44■□□□□ 0.22
PKD1-219ENST00000486339 CCDC34Q96HJ3 373 aa16.44■□□□□ 0.22
PKD1-219ENST00000486339 UHRF1BP1Q6BDS2 1440 aa16.44■□□□□ 0.22
PKD1-219ENST00000486339 MYO5CQ9NQX4 1742 aa16.44■□□□□ 0.22
PKD1-219ENST00000486339 SRGAP3O43295 1099 aa16.44■□□□□ 0.22
PKD1-219ENST00000486339 NCKAP5LQ9HCH0 1330 aa16.44■□□□□ 0.22
PKD1-219ENST00000486339 STARD3NLO95772 234 aa16.44■□□□□ 0.22
PKD1-219ENST00000486339 PARD3Q8TEW0 1356 aa16.43■□□□□ 0.22
PKD1-219ENST00000486339 SF3A1Q15459 793 aaKnown RBP16.43■□□□□ 0.22
PKD1-219ENST00000486339 RPAP2Q8IXW5 612 aaPredicted RBP16.43■□□□□ 0.22
PKD1-219ENST00000486339 CARD14Q9BXL6 1004 aa16.43■□□□□ 0.22
PKD1-219ENST00000486339 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
PKD1-219ENST00000486339 CFAP65Q6ZU64 1925 aaKnown RBP16.43■□□□□ 0.22
PKD1-219ENST00000486339 AKAP17AQ02040 695 aaKnown RBP16.43■□□□□ 0.22
PKD1-219ENST00000486339 LRRCC1Q9C099 1032 aa16.43■□□□□ 0.22
PKD1-219ENST00000486339 SIL1Q9H173 461 aa16.43■□□□□ 0.22
PKD1-219ENST00000486339 FBXW7Q969H0 707 aa16.43■□□□□ 0.22
PKD1-219ENST00000486339 CNNM1Q9NRU3 951 aa16.42■□□□□ 0.22
PKD1-219ENST00000486339 POLKQ9UBT6 870 aa16.42■□□□□ 0.22
PKD1-219ENST00000486339 ATP6V1DQ9Y5K8 247 aa16.42■□□□□ 0.22
PKD1-219ENST00000486339 NGLY1Q96IV0 654 aa16.42■□□□□ 0.22
PKD1-219ENST00000486339 NPATQ14207 1427 aa16.42■□□□□ 0.22
PKD1-219ENST00000486339 ZFYVE16Q7Z3T8 1539 aa16.41■□□□□ 0.22
PKD1-219ENST00000486339 FAM83GA6ND36 823 aa16.41■□□□□ 0.22
PKD1-219ENST00000486339 CPLX1O14810 134 aa16.41■□□□□ 0.22
PKD1-219ENST00000486339 DRC7Q8IY82 874 aa16.41■□□□□ 0.22
PKD1-219ENST00000486339 DNAJC2Q99543 621 aaKnown RBP16.41■□□□□ 0.22
PKD1-219ENST00000486339 FOXD4L6Q3SYB3 417 aaPredicted RBP16.4■□□□□ 0.22
PKD1-219ENST00000486339 FOXD4L3Q6VB84 417 aaPredicted RBP16.4■□□□□ 0.22
PKD1-219ENST00000486339 IFNL2Q8IZJ0 200 aa16.4■□□□□ 0.22
PKD1-219ENST00000486339 RASSF8Q8NHQ8 419 aa16.4■□□□□ 0.22
PKD1-219ENST00000486339 A0A1W2PP64 1363 aa16.4■□□□□ 0.22
PKD1-219ENST00000486339 ABCC1P33527 1531 aa16.4■□□□□ 0.22
PKD1-219ENST00000486339 CCDC57Q2TAC2 916 aa16.4■□□□□ 0.22
PKD1-219ENST00000486339 C20orf194Q5TEA3 1177 aa16.39■□□□□ 0.22
PKD1-219ENST00000486339 KLHL34Q8N239 644 aa16.39■□□□□ 0.22
PKD1-219ENST00000486339 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.22
PKD1-219ENST00000486339 RALYLQ86SE5 291 aaKnown RBP16.39■□□□□ 0.21
PKD1-219ENST00000486339 DDX11L8A8MPP1 907 aa16.39■□□□□ 0.21
PKD1-219ENST00000486339 EXOC5O00471 708 aa16.39■□□□□ 0.21
PKD1-219ENST00000486339 PER1O15534 1290 aaPredicted RBP16.39■□□□□ 0.21
PKD1-219ENST00000486339 CCDC27Q2M243 656 aa16.39■□□□□ 0.21
PKD1-219ENST00000486339 CHD1LQ86WJ1 897 aa16.39■□□□□ 0.21
PKD1-219ENST00000486339 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
PKD1-219ENST00000486339 POLR3AO14802 1390 aaPredicted RBP16.38■□□□□ 0.21
PKD1-219ENST00000486339 IL16Q14005 1332 aa16.38■□□□□ 0.21
PKD1-219ENST00000486339 DBF4Q9UBU7 674 aaPredicted RBP16.38■□□□□ 0.21
PKD1-219ENST00000486339 EIF4A2Q14240 407 aaKnown RBP16.37■□□□□ 0.21
PKD1-219ENST00000486339 MCTP1Q6DN14 999 aa16.37■□□□□ 0.21
PKD1-219ENST00000486339 TRIM34Q9BYJ4 488 aa16.37■□□□□ 0.21
PKD1-219ENST00000486339 COL17A1Q9UMD9 1497 aaPredicted RBP16.37■□□□□ 0.21
PKD1-219ENST00000486339 SAMD9LQ8IVG5 1584 aa16.37■□□□□ 0.21
PKD1-219ENST00000486339 F6X3S4 739 aa16.37■□□□□ 0.21
PKD1-219ENST00000486339 CCDC158Q5M9N0 1113 aa16.37■□□□□ 0.21
PKD1-219ENST00000486339 AEBP1Q8IUX7 1158 aa16.37■□□□□ 0.21
PKD1-219ENST00000486339 MPHOSPH8Q99549 860 aa16.37■□□□□ 0.21
PKD1-219ENST00000486339 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
PKD1-219ENST00000486339 HIP1O00291 1037 aa16.37■□□□□ 0.21
PKD1-219ENST00000486339 TOM1O60784 492 aa16.37■□□□□ 0.21
PKD1-219ENST00000486339 SF3B2Q13435 895 aaKnown RBP16.37■□□□□ 0.21
PKD1-219ENST00000486339 FMNL2Q96PY5 1086 aa16.37■□□□□ 0.21
PKD1-219ENST00000486339 IL1RAPL2Q9NP60 686 aa16.37■□□□□ 0.21
PKD1-219ENST00000486339 TTC37Q6PGP7 1564 aa16.37■□□□□ 0.21
PKD1-219ENST00000486339 CHMP5Q9NZZ3 219 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms