RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 PHTF2Q8N3S3 785 aa11.45□□□□□ -0.58
RTN4-214ENST00000486085 MRGPRX2Q96LB1 330 aa11.45□□□□□ -0.58
RTN4-214ENST00000486085 CDV3Q9UKY7 258 aaKnown RBP11.45□□□□□ -0.58
RTN4-214ENST00000486085 V9GY48 417 aaPredicted RBP11.45□□□□□ -0.58
RTN4-214ENST00000486085 RAB15P59190 212 aa11.44□□□□□ -0.58
RTN4-214ENST00000486085 NBPF20Q3BBV1 942 aa11.44□□□□□ -0.58
RTN4-214ENST00000486085 KCTD15Q96SI1 283 aaPredicted RBP11.44□□□□□ -0.58
RTN4-214ENST00000486085 SIAH2O43255 324 aa11.43□□□□□ -0.58
RTN4-214ENST00000486085 TSGA10IPQ3SY00 556 aa11.43□□□□□ -0.58
RTN4-214ENST00000486085 NFATC2IPQ8NCF5 419 aa11.43□□□□□ -0.58
RTN4-214ENST00000486085 MAFBQ9Y5Q3 323 aaPredicted RBP11.43□□□□□ -0.58
RTN4-214ENST00000486085 TLL2Q9Y6L7 1015 aa11.43□□□□□ -0.58
RTN4-214ENST00000486085 ESPNB1AK53 854 aa11.41□□□□□ -0.58
RTN4-214ENST00000486085 RNF20Q5VTR2 975 aa11.41□□□□□ -0.58
RTN4-214ENST00000486085 DEPDC4Q8N2C3 294 aa11.41□□□□□ -0.58
RTN4-214ENST00000486085 PLPP7Q8NBV4 271 aa11.41□□□□□ -0.58
RTN4-214ENST00000486085 CCDC85AQ96PX6 553 aaPredicted RBP11.41□□□□□ -0.58
RTN4-214ENST00000486085 CDK15Q96Q40 435 aa11.41□□□□□ -0.58
RTN4-214ENST00000486085 MAP4K5Q9Y4K4 846 aa11.41□□□□□ -0.58
RTN4-214ENST00000486085 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.4□□□□□ -0.58
RTN4-214ENST00000486085 USP17L5A8MUK1 530 aa11.4□□□□□ -0.58
RTN4-214ENST00000486085 CDCA8Q53HL2 280 aa11.4□□□□□ -0.58
RTN4-214ENST00000486085 ARXQ96QS3 562 aa11.4□□□□□ -0.58
RTN4-214ENST00000486085 PKD2L1Q9P0L9 805 aa11.4□□□□□ -0.58
RTN4-214ENST00000486085 USP17L3A6NCW0 530 aa11.38□□□□□ -0.59
RTN4-214ENST00000486085 USP17L4A6NCW7 530 aa11.38□□□□□ -0.59
RTN4-214ENST00000486085 GRM5P41594 1212 aa11.38□□□□□ -0.59
RTN4-214ENST00000486085 USP17L2Q6R6M4 530 aa11.38□□□□□ -0.59
RTN4-214ENST00000486085 USP17L1Q7RTZ2 530 aa11.38□□□□□ -0.59
RTN4-214ENST00000486085 HOMEZQ8IX15 550 aa11.38□□□□□ -0.59
RTN4-214ENST00000486085 MPNDQ8N594 471 aa11.38□□□□□ -0.59
RTN4-214ENST00000486085 DOLKQ9UPQ8 538 aa11.38□□□□□ -0.59
RTN4-214ENST00000486085 FSHRP23945 695 aa11.37□□□□□ -0.59
RTN4-214ENST00000486085 MAP7D1Q3KQU3 841 aa11.37□□□□□ -0.59
RTN4-214ENST00000486085 INTS6LQ5JSJ4 861 aaKnown RBP11.37□□□□□ -0.59
RTN4-214ENST00000486085 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
RTN4-214ENST00000486085 PBXIP1Q96AQ6 731 aa11.37□□□□□ -0.59
RTN4-214ENST00000486085 CHIC2Q9UKJ5 165 aa11.37□□□□□ -0.59
RTN4-214ENST00000486085 PCDHB11Q9Y5F2 797 aa11.37□□□□□ -0.59
RTN4-214ENST00000486085 ALDH1A1P00352 501 aa11.36□□□□□ -0.59
RTN4-214ENST00000486085 NCOA4Q13772 614 aa11.36□□□□□ -0.59
RTN4-214ENST00000486085 OXLD1Q5BKU9 147 aa11.36□□□□□ -0.59
RTN4-214ENST00000486085 TRAF7Q6Q0C0 670 aa11.36□□□□□ -0.59
RTN4-214ENST00000486085 PLEKHM2Q8IWE5 1019 aa11.36□□□□□ -0.59
RTN4-214ENST00000486085 CDCA7Q9BWT1 371 aaPredicted RBP11.36□□□□□ -0.59
RTN4-214ENST00000486085 TNFRSF10AO00220 468 aa11.35□□□□□ -0.59
RTN4-214ENST00000486085 PPP1R15AO75807 674 aaPredicted RBP11.35□□□□□ -0.59
RTN4-214ENST00000486085 ADH1CP00326 375 aa11.35□□□□□ -0.59
RTN4-214ENST00000486085 SRPK2P78362 688 aaKnown RBP11.35□□□□□ -0.59
RTN4-214ENST00000486085 VRTNQ9H8Y1 702 aa11.35□□□□□ -0.59
RTN4-214ENST00000486085 ACIN1Q9UKV3 1341 aaKnown RBP11.35□□□□□ -0.59
RTN4-214ENST00000486085 ERVH48-1M5A8F1 160 aa11.34□□□□□ -0.59
RTN4-214ENST00000486085 GDF9O60383 454 aa11.34□□□□□ -0.59
RTN4-214ENST00000486085 EML3Q32P44 896 aa11.34□□□□□ -0.59
RTN4-214ENST00000486085 SNIP1Q8TAD8 396 aaKnown RBP11.34□□□□□ -0.59
RTN4-214ENST00000486085 MKRN1Q9UHC7 482 aaKnown RBP11.34□□□□□ -0.59
RTN4-214ENST00000486085 LZTS3O60299 673 aaPredicted RBP11.33□□□□□ -0.6
RTN4-214ENST00000486085 KANK4Q5T7N3 995 aaPredicted RBP11.33□□□□□ -0.6
RTN4-214ENST00000486085 CCDC125Q86Z20 511 aa11.33□□□□□ -0.6
RTN4-214ENST00000486085 TTC24A2A3L6 582 aaPredicted RBP11.32□□□□□ -0.6
RTN4-214ENST00000486085 NR5A1Q13285 461 aa11.32□□□□□ -0.6
RTN4-214ENST00000486085 CYP4X1Q8N118 509 aa11.32□□□□□ -0.6
RTN4-214ENST00000486085 TMPRSS4Q9NRS4 437 aa11.32□□□□□ -0.6
RTN4-214ENST00000486085 WASF2Q9Y6W5 498 aa11.32□□□□□ -0.6
RTN4-214ENST00000486085 CCDC116Q8IYX3 515 aa11.31□□□□□ -0.6
RTN4-214ENST00000486085 J3QL48 77 aa11.3□□□□□ -0.6
RTN4-214ENST00000486085 NR3C2P08235 984 aa11.3□□□□□ -0.6
RTN4-214ENST00000486085 DHX9Q08211 1270 aaKnown RBP11.3□□□□□ -0.6
RTN4-214ENST00000486085 NOD1Q9Y239 953 aa11.3□□□□□ -0.6
RTN4-214ENST00000486085 USP4Q13107 963 aa11.29□□□□□ -0.6
RTN4-214ENST00000486085 PPP1R26Q5T8A7 1209 aaPredicted RBP11.29□□□□□ -0.6
RTN4-214ENST00000486085 TRIM67Q6ZTA4 783 aa11.29□□□□□ -0.6
RTN4-214ENST00000486085 NNTQ13423 1086 aa11.28□□□□□ -0.6
RTN4-214ENST00000486085 ATP5J2-PTCD1G3V325 749 aa11.27□□□□□ -0.61
RTN4-214ENST00000486085 RGS20O76081 388 aa11.27□□□□□ -0.61
RTN4-214ENST00000486085 MYCP01106 439 aaPredicted RBP11.27□□□□□ -0.61
RTN4-214ENST00000486085 RASA1P20936 1047 aa11.27□□□□□ -0.61
RTN4-214ENST00000486085 SCTRP47872 440 aa11.27□□□□□ -0.61
RTN4-214ENST00000486085 SIRT1Q96EB6 747 aa11.27□□□□□ -0.61
RTN4-214ENST00000486085 ESF1Q9H501 851 aaKnown RBP11.27□□□□□ -0.61
RTN4-214ENST00000486085 CYLDQ9NQC7 956 aa11.27□□□□□ -0.61
RTN4-214ENST00000486085 TOR4AQ9NXH8 423 aa11.27□□□□□ -0.61
RTN4-214ENST00000486085 PRR20EP86478 221 aa11.26□□□□□ -0.61
RTN4-214ENST00000486085 PRR20CP86479 221 aa11.26□□□□□ -0.61
RTN4-214ENST00000486085 PRR20DP86480 221 aa11.26□□□□□ -0.61
RTN4-214ENST00000486085 PRR20BP86481 221 aa11.26□□□□□ -0.61
RTN4-214ENST00000486085 PRR20AP86496 221 aa11.26□□□□□ -0.61
RTN4-214ENST00000486085 LARP1Q6PKG0 1096 aaKnown RBP11.26□□□□□ -0.61
RTN4-214ENST00000486085 TRIM50Q86XT4 487 aa11.26□□□□□ -0.61
RTN4-214ENST00000486085 ZNF784Q8NCA9 323 aaPredicted RBP11.26□□□□□ -0.61
RTN4-214ENST00000486085 ATG7O95352 703 aa11.25□□□□□ -0.61
RTN4-214ENST00000486085 OGFOD1Q8N543 542 aa11.25□□□□□ -0.61
RTN4-214ENST00000486085 RETREG2Q8NC44 543 aa11.25□□□□□ -0.61
RTN4-214ENST00000486085 PGPEP1Q9NXJ5 209 aa11.25□□□□□ -0.61
RTN4-214ENST00000486085 SMPD1P17405 629 aa11.24□□□□□ -0.61
RTN4-214ENST00000486085 GTF2IP78347 998 aa11.24□□□□□ -0.61
RTN4-214ENST00000486085 MYT1Q01538 1121 aa11.24□□□□□ -0.61
RTN4-214ENST00000486085 CRTC2Q53ET0 693 aaPredicted RBP11.24□□□□□ -0.61
RTN4-214ENST00000486085 CC2D2BQ6DHV5 1058 aa11.24□□□□□ -0.61
RTN4-214ENST00000486085 EMILIN1Q9Y6C2 1016 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms