RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 COL14A1Q05707 1796 aaKnown RBP21.36■■□□□ 1.01
APOE-205ENST00000485628 HSP90AB2PQ58FF8 381 aa21.36■■□□□ 1.01
APOE-205ENST00000485628 CAMTA1Q9Y6Y1 1673 aa21.36■■□□□ 1.01
APOE-205ENST00000485628 PLEKHG5O94827 1062 aa21.34■■□□□ 1.01
APOE-205ENST00000485628 AMPHP49418 695 aa21.34■■□□□ 1.01
APOE-205ENST00000485628 SLIT2O94813 1529 aa21.34■■□□□ 1.01
APOE-205ENST00000485628 IL13P35225 146 aa21.33■■□□□ 1.01
APOE-205ENST00000485628 CHRNA2Q15822 529 aa21.33■■□□□ 1.01
APOE-205ENST00000485628 PRDM11Q9NQV5 511 aa21.33■■□□□ 1.01
APOE-205ENST00000485628 RGPD1P0DJD0 1748 aa21.32■■□□□ 1
APOE-205ENST00000485628 NUTM2BA6NNL0 878 aaPredicted RBP21.31■■□□□ 1
APOE-205ENST00000485628 NUTM2EB1AL46 878 aaPredicted RBP21.31■■□□□ 1
APOE-205ENST00000485628 HAP1P54257 671 aaPredicted RBP21.31■■□□□ 1
APOE-205ENST00000485628 NUTM2AQ8IVF1 878 aaPredicted RBP21.31■■□□□ 1
APOE-205ENST00000485628 NWD2Q9ULI1 1742 aa21.31■■□□□ 1
APOE-205ENST00000485628 NCAPD2Q15021 1401 aa21.3■■□□□ 1
APOE-205ENST00000485628 PPM1GO15355 546 aaPredicted RBP21.3■■□□□ 1
APOE-205ENST00000485628 EIF4A2Q14240 407 aaKnown RBP21.3■■□□□ 1
APOE-205ENST00000485628 FNBP4Q8N3X1 1017 aaPredicted RBP21.3■■□□□ 1
APOE-205ENST00000485628 PNISRQ8TF01 805 aaKnown RBP21.3■■□□□ 1
APOE-205ENST00000485628 PLCH1Q4KWH8 1693 aa21.3■■□□□ 1
APOE-205ENST00000485628 ERBB3P21860 1342 aa21.29■■□□□ 1
APOE-205ENST00000485628 NRAPQ86VF7 1730 aa21.29■■□□□ 1
APOE-205ENST00000485628 COL5A2P05997 1499 aaPredicted RBP21.29■■□□□ 1
APOE-205ENST00000485628 CFAP53Q96M91 514 aa21.29■■□□□ 1
APOE-205ENST00000485628 DIAPH1O60610 1272 aaKnown RBP21.28■■□□□ 1
APOE-205ENST00000485628 ADAMTS2O95450 1211 aa21.28■■□□□ 1
APOE-205ENST00000485628 MRS2Q9HD23 443 aa21.27■■□□□ 1
APOE-205ENST00000485628 BCL9LQ86UU0 1499 aa21.26■□□□□ 0.99
APOE-205ENST00000485628 FAM208AQ9UK61 1670 aaKnown RBP21.26■□□□□ 0.99
APOE-205ENST00000485628 ANKRD24Q8TF21 1146 aa21.25■□□□□ 0.99
APOE-205ENST00000485628 RGPD2P0DJD1 1756 aa21.25■□□□□ 0.99
APOE-205ENST00000485628 IGSF1Q8N6C5 1336 aa21.25■□□□□ 0.99
APOE-205ENST00000485628 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.24■□□□□ 0.99
APOE-205ENST00000485628 EYA1Q99502 592 aa21.24■□□□□ 0.99
APOE-205ENST00000485628 BTG4Q9NY30 223 aa21.24■□□□□ 0.99
APOE-205ENST00000485628 WDR17Q8IZU2 1322 aa21.24■□□□□ 0.99
APOE-205ENST00000485628 ILDR1Q86SU0 546 aaPredicted RBP21.23■□□□□ 0.99
APOE-205ENST00000485628 KDRP35968 1356 aa21.23■□□□□ 0.99
APOE-205ENST00000485628 ZBTB7CA1YPR0 619 aa21.22■□□□□ 0.99
APOE-205ENST00000485628 NBPF6Q5VWK0 638 aa21.22■□□□□ 0.99
APOE-205ENST00000485628 NBPF4Q96M43 638 aa21.22■□□□□ 0.99
APOE-205ENST00000485628 UNC5CLQ8IV45 518 aa21.2■□□□□ 0.98
APOE-205ENST00000485628 NUDCQ9Y266 331 aa21.2■□□□□ 0.98
APOE-205ENST00000485628 LARP1Q6PKG0 1096 aaKnown RBP21.19■□□□□ 0.98
APOE-205ENST00000485628 NGLY1Q96IV0 654 aa21.19■□□□□ 0.98
APOE-205ENST00000485628 C8orf37Q96NL8 207 aa21.19■□□□□ 0.98
APOE-205ENST00000485628 ADAMTS8Q9UP79 889 aa21.19■□□□□ 0.98
APOE-205ENST00000485628 LTV1Q96GA3 475 aaPredicted RBP21.18■□□□□ 0.98
APOE-205ENST00000485628 CARD10Q9BWT7 1032 aa21.18■□□□□ 0.98
APOE-205ENST00000485628 CRB1P82279 1406 aa21.18■□□□□ 0.98
APOE-205ENST00000485628 FCHSD2O94868 740 aa21.16■□□□□ 0.98
APOE-205ENST00000485628 PLEKHF1Q96S99 279 aa21.16■□□□□ 0.98
APOE-205ENST00000485628 RSPH6AQ9H0K4 717 aa21.16■□□□□ 0.98
APOE-205ENST00000485628 AFF2P51816 1311 aa21.15■□□□□ 0.98
APOE-205ENST00000485628 VPS72Q15906 364 aa21.15■□□□□ 0.98
APOE-205ENST00000485628 ATRNO75882 1429 aa21.14■□□□□ 0.98
APOE-205ENST00000485628 PLEKHG2Q9H7P9 1386 aa21.14■□□□□ 0.98
APOE-205ENST00000485628 SPATA31A5Q5VU36 1347 aa21.14■□□□□ 0.97
APOE-205ENST00000485628 SPATA31A7Q8IWB4 1347 aa21.14■□□□□ 0.97
APOE-205ENST00000485628 U2AF1L5P0DN76 240 aaPredicted RBP21.14■□□□□ 0.97
APOE-205ENST00000485628 EVA1CP58658 441 aa21.14■□□□□ 0.97
APOE-205ENST00000485628 U2AF1Q01081 240 aaKnown RBP eCLIP21.14■□□□□ 0.97
APOE-205ENST00000485628 AEBP1Q8IUX7 1158 aa21.14■□□□□ 0.97
APOE-205ENST00000485628 SPATA31A1Q5TZJ5 1347 aa21.13■□□□□ 0.97
APOE-205ENST00000485628 MEX3CQ5U5Q3 659 aaKnown RBP21.13■□□□□ 0.97
APOE-205ENST00000485628 SULT6B1Q6IMI4 303 aa21.13■□□□□ 0.97
APOE-205ENST00000485628 USP21Q9UK80 565 aa21.13■□□□□ 0.97
APOE-205ENST00000485628 U2SURPO15042 1029 aaKnown RBP21.12■□□□□ 0.97
APOE-205ENST00000485628 WDR43Q15061 677 aaKnown RBP eCLIP21.12■□□□□ 0.97
APOE-205ENST00000485628 STRN4Q9NRL3 753 aa21.12■□□□□ 0.97
APOE-205ENST00000485628 NLRP2Q9NX02 1062 aa21.12■□□□□ 0.97
APOE-205ENST00000485628 DISP2A7MBM2 1401 aa21.12■□□□□ 0.97
APOE-205ENST00000485628 CSB-PGBD3P0DP91 1061 aa21.11■□□□□ 0.97
APOE-205ENST00000485628 TOM1L2Q6ZVM7 507 aa21.11■□□□□ 0.97
APOE-205ENST00000485628 HMOX1P09601 288 aa21.1■□□□□ 0.97
APOE-205ENST00000485628 USHBP1Q8N6Y0 703 aa21.1■□□□□ 0.97
APOE-205ENST00000485628 THRAP3Q9Y2W1 955 aaKnown RBP21.1■□□□□ 0.97
APOE-205ENST00000485628 WNK3Q9BYP7 1800 aa21.09■□□□□ 0.97
APOE-205ENST00000485628 FAM9BQ8IZU0 186 aa21.09■□□□□ 0.97
APOE-205ENST00000485628 RGS17Q9UGC6 210 aaPredicted RBP21.09■□□□□ 0.97
APOE-205ENST00000485628 GLI3P10071 1580 aa21.08■□□□□ 0.97
APOE-205ENST00000485628 BARGINQ6ZT62 677 aa21.08■□□□□ 0.97
APOE-205ENST00000485628 ONECUT3O60422 494 aaPredicted RBP21.07■□□□□ 0.96
APOE-205ENST00000485628 TCP11L2Q8N4U5 519 aa21.07■□□□□ 0.96
APOE-205ENST00000485628 MEGF6O75095 1541 aa21.07■□□□□ 0.96
APOE-205ENST00000485628 PRKAR2BP31323 418 aa21.06■□□□□ 0.96
APOE-205ENST00000485628 RUNDC1Q96C34 613 aa21.06■□□□□ 0.96
APOE-205ENST00000485628 PHACTR3Q96KR7 559 aa21.06■□□□□ 0.96
APOE-205ENST00000485628 TRPC5Q9UL62 973 aaPredicted RBP21.06■□□□□ 0.96
APOE-205ENST00000485628 PKD1L3Q7Z443 1732 aa21.06■□□□□ 0.96
APOE-205ENST00000485628 OVOS2A0A0G2JMS6 1433 aa21.05■□□□□ 0.96
APOE-205ENST00000485628 GJD4Q96KN9 370 aaPredicted RBP21.05■□□□□ 0.96
APOE-205ENST00000485628 PNNQ9H307 717 aaKnown RBP21.05■□□□□ 0.96
APOE-205ENST00000485628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.05■□□□□ 0.96
APOE-205ENST00000485628 PARP4Q9UKK3 1724 aaKnown RBP21.04■□□□□ 0.96
APOE-205ENST00000485628 NCBP3Q53F19 620 aaKnown RBP21.04■□□□□ 0.96
APOE-205ENST00000485628 ZNF772Q68DY9 489 aaPredicted RBP21.04■□□□□ 0.96
APOE-205ENST00000485628 THSD7AQ9UPZ6 1657 aa21.03■□□□□ 0.96
APOE-205ENST00000485628 QTRT2Q9H974 415 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms