RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 OVOS2Q6IE36 1432 aa15.29■□□□□ 0.04
HMGN1-215ENST00000485550 ACEP12821 1306 aa15.29■□□□□ 0.04
HMGN1-215ENST00000485550 ABTB2Q8N961 1025 aa15.29■□□□□ 0.04
HMGN1-215ENST00000485550 THRAP3Q9Y2W1 955 aaKnown RBP15.29■□□□□ 0.04
HMGN1-215ENST00000485550 RGPD5Q99666 1765 aa15.29■□□□□ 0.04
HMGN1-215ENST00000485550 COL5A2P05997 1499 aaPredicted RBP15.28■□□□□ 0.04
HMGN1-215ENST00000485550 ZBTB7AO95365 584 aa15.28■□□□□ 0.04
HMGN1-215ENST00000485550 PTF1AQ7RTS3 328 aa15.28■□□□□ 0.04
HMGN1-215ENST00000485550 POLR3AO14802 1390 aaPredicted RBP15.27■□□□□ 0.04
HMGN1-215ENST00000485550 CPDO75976 1380 aa15.27■□□□□ 0.04
HMGN1-215ENST00000485550 ZBTB7CA1YPR0 619 aa15.27■□□□□ 0.04
HMGN1-215ENST00000485550 PLSCR1O15162 318 aa15.27■□□□□ 0.04
HMGN1-215ENST00000485550 SIN3AQ96ST3 1273 aa15.27■□□□□ 0.04
HMGN1-215ENST00000485550 UTRNP46939 3433 aa15.26■□□□□ 0.03
HMGN1-215ENST00000485550 SENP3-EIF4A1A0A087X0R7 540 aa15.26■□□□□ 0.03
HMGN1-215ENST00000485550 BCL11BQ9C0K0 894 aaPredicted RBP15.26■□□□□ 0.03
HMGN1-215ENST00000485550 ATF5Q9Y2D1 282 aaPredicted RBP15.26■□□□□ 0.03
HMGN1-215ENST00000485550 USP19O94966 1318 aa15.25■□□□□ 0.03
HMGN1-215ENST00000485550 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
HMGN1-215ENST00000485550 CRB1P82279 1406 aa15.25■□□□□ 0.03
HMGN1-215ENST00000485550 C11orf95C9JLR9 678 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-215ENST00000485550 GCP02774 474 aa15.24■□□□□ 0.03
HMGN1-215ENST00000485550 PTGER2P43116 358 aa15.24■□□□□ 0.03
HMGN1-215ENST00000485550 L3MBTL2Q969R5 705 aa15.24■□□□□ 0.03
HMGN1-215ENST00000485550 COL18A1P39060 1754 aa15.24■□□□□ 0.03
HMGN1-215ENST00000485550 DDB1Q16531 1140 aa15.23■□□□□ 0.03
HMGN1-215ENST00000485550 NLRP13Q86W25 1043 aa15.23■□□□□ 0.03
HMGN1-215ENST00000485550 PROM2Q8N271 834 aa15.23■□□□□ 0.03
HMGN1-215ENST00000485550 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
HMGN1-215ENST00000485550 PLEKHG3A1L390 1219 aa15.22■□□□□ 0.03
HMGN1-215ENST00000485550 MYCNP04198 464 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-215ENST00000485550 SRPK2P78362 688 aaKnown RBP15.22■□□□□ 0.03
HMGN1-215ENST00000485550 FHDC1Q9C0D6 1143 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-215ENST00000485550 CABP2Q9NPB3 220 aa15.22■□□□□ 0.03
HMGN1-215ENST00000485550 TOM1L2Q6ZVM7 507 aa15.21■□□□□ 0.03
HMGN1-215ENST00000485550 SYT17Q9BSW7 474 aa15.21■□□□□ 0.03
HMGN1-215ENST00000485550 CENPJQ9HC77 1338 aaPredicted RBP15.2■□□□□ 0.02
HMGN1-215ENST00000485550 STK32BQ9NY57 414 aa15.2■□□□□ 0.02
HMGN1-215ENST00000485550 C1QTNF8P60827 252 aa15.19■□□□□ 0.02
HMGN1-215ENST00000485550 MARCH10Q8NA82 808 aaPredicted RBP15.19■□□□□ 0.02
HMGN1-215ENST00000485550 PPIP5K1Q6PFW1 1433 aa15.18■□□□□ 0.02
HMGN1-215ENST00000485550 TXNRD1Q16881 649 aa15.18■□□□□ 0.02
HMGN1-215ENST00000485550 SLC15A2Q16348 729 aa15.17■□□□□ 0.02
HMGN1-215ENST00000485550 SLIT3O75094 1523 aa15.17■□□□□ 0.02
HMGN1-215ENST00000485550 PIK3C2AO00443 1686 aa15.16■□□□□ 0.02
HMGN1-215ENST00000485550 AATKQ6ZMQ8 1374 aa15.16■□□□□ 0.02
HMGN1-215ENST00000485550 NLRP6P59044 892 aa15.16■□□□□ 0.02
HMGN1-215ENST00000485550 CABP1Q9NZU7 370 aa15.16■□□□□ 0.02
HMGN1-215ENST00000485550 KIAA1210Q9ULL0 1709 aa15.16■□□□□ 0.02
HMGN1-215ENST00000485550 SGIP1Q9BQI5 828 aa15.15■□□□□ 0.02
HMGN1-215ENST00000485550 MTFR1LQ9H019 292 aa15.15■□□□□ 0.02
HMGN1-215ENST00000485550 AXIN2Q9Y2T1 843 aa15.15■□□□□ 0.02
HMGN1-215ENST00000485550 NHSQ6T4R5 1651 aa15.14■□□□□ 0.01
HMGN1-215ENST00000485550 QRICH2Q9H0J4 1663 aa15.14■□□□□ 0.01
HMGN1-215ENST00000485550 BCL9O00512 1426 aa15.14■□□□□ 0.01
HMGN1-215ENST00000485550 WDR17Q8IZU2 1322 aa15.14■□□□□ 0.01
HMGN1-215ENST00000485550 BTAF1O14981 1849 aa15.13■□□□□ 0.01
HMGN1-215ENST00000485550 USP6P35125 1406 aa15.12■□□□□ 0.01
HMGN1-215ENST00000485550 IFFO2Q5TF58 517 aa15.12■□□□□ 0.01
HMGN1-215ENST00000485550 POTEHQ6S545 545 aa15.12■□□□□ 0.01
HMGN1-215ENST00000485550 ARXQ96QS3 562 aa15.12■□□□□ 0.01
HMGN1-215ENST00000485550 CPSF1Q10570 1443 aaKnown RBP15.11■□□□□ 0.01
HMGN1-215ENST00000485550 PAPPAQ13219 1627 aa15.11■□□□□ 0.01
HMGN1-215ENST00000485550 CSB-PGBD3P0DP91 1061 aa15.11■□□□□ 0.01
HMGN1-215ENST00000485550 CDCA7Q9BWT1 371 aaPredicted RBP15.11■□□□□ 0.01
HMGN1-215ENST00000485550 ROCK2O75116 1388 aaKnown RBP15.11■□□□□ 0.01
HMGN1-215ENST00000485550 EXOC5O00471 708 aa15.1■□□□□ 0.01
HMGN1-215ENST00000485550 SOX12O15370 315 aa15.1■□□□□ 0.01
HMGN1-215ENST00000485550 GPR162Q16538 588 aa15.1■□□□□ 0.01
HMGN1-215ENST00000485550 ACSBG1Q96GR2 724 aa15.1■□□□□ 0.01
HMGN1-215ENST00000485550 EVC2Q86UK5 1308 aa15.1■□□□□ 0.01
HMGN1-215ENST00000485550 TUBGCP6Q96RT7 1819 aa15.1■□□□□ 0.01
HMGN1-215ENST00000485550 BRD4O60885 1362 aaPredicted RBP15.1■□□□□ 0.01
HMGN1-215ENST00000485550 KLHL34Q8N239 644 aa15.09■□□□□ 0.01
HMGN1-215ENST00000485550 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
HMGN1-215ENST00000485550 TRPM1Q7Z4N2 1603 aa15.08■□□□□ 0
HMGN1-215ENST00000485550 GIGYF1O75420 1035 aaPredicted RBP15.08■□□□□ 0
HMGN1-215ENST00000485550 CARD10Q9BWT7 1032 aa15.08■□□□□ 0
HMGN1-215ENST00000485550 QSER1Q2KHR3 1735 aa15.07■□□□□ 0
HMGN1-215ENST00000485550 SHANK3Q9BYB0 1731 aa15.07■□□□□ 0
HMGN1-215ENST00000485550 ARHGEF25Q86VW2 580 aa15.07■□□□□ 0
HMGN1-215ENST00000485550 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
HMGN1-215ENST00000485550 MAP3K5Q99683 1374 aa15.07■□□□□ 0
HMGN1-215ENST00000485550 TNS2Q63HR2 1409 aa15.07■□□□□ 0
HMGN1-215ENST00000485550 COL24A1Q17RW2 1714 aa15.06■□□□□ 0
HMGN1-215ENST00000485550 ZNF827Q17R98 1081 aa15.06■□□□□ 0
HMGN1-215ENST00000485550 LTN1O94822 1766 aa15.06■□□□□ 0
HMGN1-215ENST00000485550 POLA2Q14181 598 aa15.05■□□□□ -0
HMGN1-215ENST00000485550 CARD11Q9BXL7 1154 aa15.05■□□□□ -0
HMGN1-215ENST00000485550 ABCC6O95255 1503 aa15.04■□□□□ -0
HMGN1-215ENST00000485550 CCDC7Q96M83 1385 aa15.04■□□□□ -0
HMGN1-215ENST00000485550 CEP350Q5VT06 3117 aa15.03■□□□□ -0
HMGN1-215ENST00000485550 NFAT5O94916 1531 aa15.03■□□□□ -0
HMGN1-215ENST00000485550 GOLGB1Q14789 3259 aaKnown RBP15.03■□□□□ -0
HMGN1-215ENST00000485550 KCNH5Q8NCM2 988 aa15.03■□□□□ -0
HMGN1-215ENST00000485550 ZNF692Q9BU19 519 aaPredicted RBP15.03■□□□□ -0
HMGN1-215ENST00000485550 TTC21BQ7Z4L5 1316 aa15.02■□□□□ -0
HMGN1-215ENST00000485550 LRRC4BQ9NT99 713 aa15.02■□□□□ -0
HMGN1-215ENST00000485550 TONSLQ96HA7 1378 aa15□□□□□ -0.01
HMGN1-215ENST00000485550 POLD1P28340 1107 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms