RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 MTMR14Q8NCE2 650 aa7.4□□□□□ -1.22
SFPQ-209ENST00000485454 SLC10A4Q96EP9 437 aa7.4□□□□□ -1.22
SFPQ-209ENST00000485454 ADAM32Q8TC27 787 aa7.39□□□□□ -1.23
SFPQ-209ENST00000485454 CDV3Q9UKY7 258 aaKnown RBP7.39□□□□□ -1.23
SFPQ-209ENST00000485454 FSHRP23945 695 aa7.38□□□□□ -1.23
SFPQ-209ENST00000485454 SLC16A10Q8TF71 515 aa7.38□□□□□ -1.23
SFPQ-209ENST00000485454 NXF1Q9UBU9 619 aaKnown RBP7.38□□□□□ -1.23
SFPQ-209ENST00000485454 NDUFB9Q9Y6M9 179 aa7.38□□□□□ -1.23
SFPQ-209ENST00000485454 NR3C2P08235 984 aa7.37□□□□□ -1.23
SFPQ-209ENST00000485454 TIMP2P16035 220 aa7.37□□□□□ -1.23
SFPQ-209ENST00000485454 WDR4P57081 412 aaKnown RBP7.37□□□□□ -1.23
SFPQ-209ENST00000485454 LCE2CQ5TA81 110 aa7.37□□□□□ -1.23
SFPQ-209ENST00000485454 STK17AQ9UEE5 414 aa7.37□□□□□ -1.23
SFPQ-209ENST00000485454 ZBBXA8MT70 800 aa7.36□□□□□ -1.23
SFPQ-209ENST00000485454 ZFP42Q96MM3 310 aa7.36□□□□□ -1.23
SFPQ-209ENST00000485454 KCTD15Q96SI1 283 aaPredicted RBP7.36□□□□□ -1.23
SFPQ-209ENST00000485454 KLF16Q9BXK1 252 aaPredicted RBP7.36□□□□□ -1.23
SFPQ-209ENST00000485454 ZIC2O95409 532 aaPredicted RBP7.35□□□□□ -1.23
SFPQ-209ENST00000485454 DZIP3Q86Y13 1208 aaKnown RBP7.35□□□□□ -1.23
SFPQ-209ENST00000485454 GPR37L1O60883 481 aa7.34□□□□□ -1.23
SFPQ-209ENST00000485454 FBXO45P0C2W1 286 aa7.34□□□□□ -1.23
SFPQ-209ENST00000485454 SCARF1Q14162 830 aa7.34□□□□□ -1.23
SFPQ-209ENST00000485454 TMEM132AQ24JP5 1023 aa7.34□□□□□ -1.23
SFPQ-209ENST00000485454 NBPF20Q3BBV1 942 aa7.34□□□□□ -1.23
SFPQ-209ENST00000485454 MRPL14Q6P1L8 145 aaKnown RBP7.34□□□□□ -1.23
SFPQ-209ENST00000485454 CCDC116Q8IYX3 515 aa7.34□□□□□ -1.23
SFPQ-209ENST00000485454 ITPKCQ96DU7 683 aa7.34□□□□□ -1.23
SFPQ-209ENST00000485454 PRM3Q9NNZ6 103 aa7.34□□□□□ -1.23
SFPQ-209ENST00000485454 EMILIN1Q9Y6C2 1016 aa7.34□□□□□ -1.23
SFPQ-209ENST00000485454 NR1H3Q13133 447 aa7.33□□□□□ -1.24
SFPQ-209ENST00000485454 NPAS3Q8IXF0 933 aa7.33□□□□□ -1.24
SFPQ-209ENST00000485454 PURBQ96QR8 312 aaKnown RBP7.33□□□□□ -1.24
SFPQ-209ENST00000485454 ZFAND3Q9H8U3 227 aa7.33□□□□□ -1.24
SFPQ-209ENST00000485454 VEGFBP49765 207 aa7.32□□□□□ -1.24
SFPQ-209ENST00000485454 DHX9Q08211 1270 aaKnown RBP7.32□□□□□ -1.24
SFPQ-209ENST00000485454 INTS6LQ5JSJ4 861 aaKnown RBP7.32□□□□□ -1.24
SFPQ-209ENST00000485454 IRF7Q92985 503 aa7.32□□□□□ -1.24
SFPQ-209ENST00000485454 TBC1D2BQ9UPU7 963 aa7.32□□□□□ -1.24
SFPQ-209ENST00000485454 MCM6Q14566 821 aa7.31□□□□□ -1.24
SFPQ-209ENST00000485454 PPP1R26Q5T8A7 1209 aaPredicted RBP7.31□□□□□ -1.24
SFPQ-209ENST00000485454 PGPEP1Q9NXJ5 209 aa7.31□□□□□ -1.24
SFPQ-209ENST00000485454 ZNF330Q9Y3S2 320 aaPredicted RBP7.31□□□□□ -1.24
SFPQ-209ENST00000485454 PCDHB9Q9Y5E1 797 aa7.31□□□□□ -1.24
SFPQ-209ENST00000485454 ESPNB1AK53 854 aa7.3□□□□□ -1.24
SFPQ-209ENST00000485454 MCCD1P59942 119 aaPredicted RBP7.3□□□□□ -1.24
SFPQ-209ENST00000485454 ZNF592Q92610 1267 aa7.3□□□□□ -1.24
SFPQ-209ENST00000485454 H3BM21 787 aa7.29□□□□□ -1.24
SFPQ-209ENST00000485454 GMPRP36959 345 aa7.29□□□□□ -1.24
SFPQ-209ENST00000485454 FAM181BA6NEQ2 426 aa7.28□□□□□ -1.24
SFPQ-209ENST00000485454 RAB15P59190 212 aa7.28□□□□□ -1.24
SFPQ-209ENST00000485454 SEPT12Q8IYM1 358 aa7.28□□□□□ -1.24
SFPQ-209ENST00000485454 MEIOBQ8N635 442 aa7.28□□□□□ -1.24
SFPQ-209ENST00000485454 GDPD2Q9HCC8 539 aa7.28□□□□□ -1.24
SFPQ-209ENST00000485454 SOBPA7XYQ1 873 aa7.27□□□□□ -1.25
SFPQ-209ENST00000485454 UPP2O95045 317 aa7.27□□□□□ -1.25
SFPQ-209ENST00000485454 C6orf118Q5T5N4 469 aa7.27□□□□□ -1.25
SFPQ-209ENST00000485454 ERVH48-1M5A8F1 160 aa7.26□□□□□ -1.25
SFPQ-209ENST00000485454 GIGYF1O75420 1035 aaPredicted RBP7.26□□□□□ -1.25
SFPQ-209ENST00000485454 FLIIQ13045 1269 aa7.26□□□□□ -1.25
SFPQ-209ENST00000485454 CBLBQ13191 982 aa7.26□□□□□ -1.25
SFPQ-209ENST00000485454 IRF5Q13568 498 aa7.26□□□□□ -1.25
SFPQ-209ENST00000485454 Q6ZVU0 165 aa7.26□□□□□ -1.25
SFPQ-209ENST00000485454 LINC00528Q8N1L1 170 aa7.26□□□□□ -1.25
SFPQ-209ENST00000485454 TMPRSS4Q9NRS4 437 aa7.26□□□□□ -1.25
SFPQ-209ENST00000485454 ERBB4Q15303 1308 aa7.26□□□□□ -1.25
SFPQ-209ENST00000485454 MAN1A2O60476 641 aa7.25□□□□□ -1.25
SFPQ-209ENST00000485454 ABL2P42684 1182 aa7.25□□□□□ -1.25
SFPQ-209ENST00000485454 RNF20Q5VTR2 975 aa7.25□□□□□ -1.25
SFPQ-209ENST00000485454 CCDC125Q86Z20 511 aa7.25□□□□□ -1.25
SFPQ-209ENST00000485454 ZSCAN1Q8NBB4 408 aa7.25□□□□□ -1.25
SFPQ-209ENST00000485454 TRIM52Q96A61 297 aa7.25□□□□□ -1.25
SFPQ-209ENST00000485454 TSEN34Q9BSV6 310 aaKnown RBP7.25□□□□□ -1.25
SFPQ-209ENST00000485454 BMP2P12643 396 aa7.24□□□□□ -1.25
SFPQ-209ENST00000485454 ZNF784Q8NCA9 323 aaPredicted RBP7.24□□□□□ -1.25
SFPQ-209ENST00000485454 COG6Q9Y2V7 657 aa7.24□□□□□ -1.25
SFPQ-209ENST00000485454 EIF4G2P78344 907 aaKnown RBP eCLIP7.23□□□□□ -1.25
SFPQ-209ENST00000485454 WASHC4Q2M389 1173 aa7.23□□□□□ -1.25
SFPQ-209ENST00000485454 LILRA1O75019 489 aa7.22□□□□□ -1.25
SFPQ-209ENST00000485454 VAC14Q08AM6 782 aa7.22□□□□□ -1.25
SFPQ-209ENST00000485454 CEP126Q9P2H0 1117 aa7.22□□□□□ -1.25
SFPQ-209ENST00000485454 RAD21O60216 631 aa7.21□□□□□ -1.26
SFPQ-209ENST00000485454 AGBL1Q96MI9 1066 aa7.21□□□□□ -1.26
SFPQ-209ENST00000485454 SPINT1O43278 529 aa7.2□□□□□ -1.26
SFPQ-209ENST00000485454 ADH1AP07327 375 aa7.2□□□□□ -1.26
SFPQ-209ENST00000485454 VSIG8P0DPA2 414 aa7.2□□□□□ -1.26
SFPQ-209ENST00000485454 UBTFP17480 764 aaKnown RBP7.2□□□□□ -1.26
SFPQ-209ENST00000485454 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
SFPQ-209ENST00000485454 ADD1P35611 737 aaKnown RBP7.2□□□□□ -1.26
SFPQ-209ENST00000485454 POM121Q96HA1 1249 aa7.2□□□□□ -1.26
SFPQ-209ENST00000485454 CYLDQ9NQC7 956 aa7.2□□□□□ -1.26
SFPQ-209ENST00000485454 SOS2Q07890 1332 aaPredicted RBP7.2□□□□□ -1.26
SFPQ-209ENST00000485454 RELBQ01201 579 aa7.19□□□□□ -1.26
SFPQ-209ENST00000485454 CC2D2BQ6DHV5 1058 aa7.19□□□□□ -1.26
SFPQ-209ENST00000485454 WWC1Q8IX03 1113 aa7.19□□□□□ -1.26
SFPQ-209ENST00000485454 PCDHB11Q9Y5F2 797 aa7.19□□□□□ -1.26
SFPQ-209ENST00000485454 SOX11P35716 441 aa7.18□□□□□ -1.26
SFPQ-209ENST00000485454 ERVK-9P63128 1117 aa7.18□□□□□ -1.26
SFPQ-209ENST00000485454 DNMT3LQ9UJW3 386 aa7.18□□□□□ -1.26
SFPQ-209ENST00000485454 TTLL8A6PVC2 850 aa7.17□□□□□ -1.26
SFPQ-209ENST00000485454 PPFIA3O75145 1194 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms