RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 PLPP7Q8NBV4 271 aa9.36□□□□□ -0.91
SRRM1-213ENST00000485441 MKRN1Q9UHC7 482 aaKnown RBP9.36□□□□□ -0.91
SRRM1-213ENST00000485441 ZMIZ1Q9ULJ6 1067 aa9.36□□□□□ -0.91
SRRM1-213ENST00000485441 GIGYF1O75420 1035 aaPredicted RBP9.35□□□□□ -0.91
SRRM1-213ENST00000485441 MAP7D1Q3KQU3 841 aa9.35□□□□□ -0.91
SRRM1-213ENST00000485441 PLA2G2CQ5R387 149 aa9.35□□□□□ -0.91
SRRM1-213ENST00000485441 DZIP3Q86Y13 1208 aaKnown RBP9.35□□□□□ -0.91
SRRM1-213ENST00000485441 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
SRRM1-213ENST00000485441 MAGEB6P1A0A0J9YX57 407 aa9.34□□□□□ -0.91
SRRM1-213ENST00000485441 ESPNB1AK53 854 aa9.34□□□□□ -0.91
SRRM1-213ENST00000485441 NCOA4Q13772 614 aa9.34□□□□□ -0.91
SRRM1-213ENST00000485441 AEBP1Q8IUX7 1158 aa9.34□□□□□ -0.91
SRRM1-213ENST00000485441 SPNS2Q8IVW8 549 aa9.34□□□□□ -0.91
SRRM1-213ENST00000485441 TRMT44Q8IYL2 757 aaKnown RBP9.34□□□□□ -0.91
SRRM1-213ENST00000485441 ANKLE1Q8NAG6 615 aa9.34□□□□□ -0.91
SRRM1-213ENST00000485441 CARD14Q9BXL6 1004 aa9.34□□□□□ -0.91
SRRM1-213ENST00000485441 FAM196BA6NMK8 535 aa9.33□□□□□ -0.92
SRRM1-213ENST00000485441 BRD1O95696 1058 aa9.33□□□□□ -0.92
SRRM1-213ENST00000485441 PTK7Q13308 1070 aa9.33□□□□□ -0.92
SRRM1-213ENST00000485441 CRTC2Q53ET0 693 aaPredicted RBP9.33□□□□□ -0.92
SRRM1-213ENST00000485441 SKOR1P84550 965 aa9.32□□□□□ -0.92
SRRM1-213ENST00000485441 RNF166Q96A37 237 aaPredicted RBP9.32□□□□□ -0.92
SRRM1-213ENST00000485441 ATP5J2-PTCD1G3V325 749 aa9.31□□□□□ -0.92
SRRM1-213ENST00000485441 ZBTB7BO15156 539 aaPredicted RBP9.31□□□□□ -0.92
SRRM1-213ENST00000485441 DKK1O94907 266 aa9.31□□□□□ -0.92
SRRM1-213ENST00000485441 TMEM164Q5U3C3 297 aa9.31□□□□□ -0.92
SRRM1-213ENST00000485441 FAM69CQ0P6D2 419 aa9.3□□□□□ -0.92
SRRM1-213ENST00000485441 TRIM32Q13049 653 aa9.3□□□□□ -0.92
SRRM1-213ENST00000485441 AGERQ15109 404 aa9.3□□□□□ -0.92
SRRM1-213ENST00000485441 STK32AQ8WU08 396 aa9.3□□□□□ -0.92
SRRM1-213ENST00000485441 NOVA2Q9UNW9 492 aaKnown RBP9.3□□□□□ -0.92
SRRM1-213ENST00000485441 USP17L15C9J2P7 530 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 USP17L10C9JJH3 530 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 USP17L13C9JLJ4 530 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 USP17L12C9JPN9 530 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 USP17L11C9JVI0 530 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 USP17L21D6R901 530 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 USP17L18D6R9N7 530 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 USP17L22D6RA61 530 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 USP17L17D6RBQ6 530 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 USP17L19D6RCP7 530 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 USP17L20D6RJB6 530 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 CLDN10P78369 228 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 USP17L24Q0WX57 530 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 PPP1R18Q6NYC8 613 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 CDCA7Q9BWT1 371 aaPredicted RBP9.29□□□□□ -0.92
SRRM1-213ENST00000485441 SLAIN2Q9P270 581 aa9.29□□□□□ -0.92
SRRM1-213ENST00000485441 RASA1P20936 1047 aa9.28□□□□□ -0.92
SRRM1-213ENST00000485441 RPIAP49247 311 aa9.28□□□□□ -0.92
SRRM1-213ENST00000485441 WNT7BP56706 349 aa9.28□□□□□ -0.92
SRRM1-213ENST00000485441 KCNA1Q09470 495 aa9.28□□□□□ -0.92
SRRM1-213ENST00000485441 EML3Q32P44 896 aa9.28□□□□□ -0.92
SRRM1-213ENST00000485441 EMID1Q96A84 441 aaPredicted RBP9.28□□□□□ -0.92
SRRM1-213ENST00000485441 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.28□□□□□ -0.92
SRRM1-213ENST00000485441 RNF20Q5VTR2 975 aa9.27□□□□□ -0.93
SRRM1-213ENST00000485441 LARP1Q6PKG0 1096 aaKnown RBP9.27□□□□□ -0.93
SRRM1-213ENST00000485441 SEPT12Q8IYM1 358 aa9.27□□□□□ -0.93
SRRM1-213ENST00000485441 OGFOD1Q8N543 542 aa9.27□□□□□ -0.93
SRRM1-213ENST00000485441 SLC10A4Q96EP9 437 aa9.27□□□□□ -0.93
SRRM1-213ENST00000485441 CDV3Q9UKY7 258 aaKnown RBP9.27□□□□□ -0.93
SRRM1-213ENST00000485441 ZBTB24O43167 697 aaPredicted RBP9.26□□□□□ -0.93
SRRM1-213ENST00000485441 VARSP26640 1264 aaKnown RBP9.26□□□□□ -0.93
SRRM1-213ENST00000485441 PHLDB3Q6NSJ2 640 aa9.26□□□□□ -0.93
SRRM1-213ENST00000485441 CCDC125Q86Z20 511 aa9.26□□□□□ -0.93
SRRM1-213ENST00000485441 ANKMY2Q8IV38 441 aa9.26□□□□□ -0.93
SRRM1-213ENST00000485441 DOLKQ9UPQ8 538 aa9.26□□□□□ -0.93
SRRM1-213ENST00000485441 PCDHGA11Q9Y5H2 935 aa9.26□□□□□ -0.93
SRRM1-213ENST00000485441 GGCXP38435 758 aa9.25□□□□□ -0.93
SRRM1-213ENST00000485441 NBPF20Q3BBV1 942 aa9.25□□□□□ -0.93
SRRM1-213ENST00000485441 LARGE2Q8N3Y3 721 aa9.25□□□□□ -0.93
SRRM1-213ENST00000485441 NOD1Q9Y239 953 aa9.25□□□□□ -0.93
SRRM1-213ENST00000485441 MAP4K5Q9Y4K4 846 aa9.25□□□□□ -0.93
SRRM1-213ENST00000485441 LIAT1Q6ZQX7 453 aa9.24□□□□□ -0.93
SRRM1-213ENST00000485441 TRIM50Q86XT4 487 aa9.24□□□□□ -0.93
SRRM1-213ENST00000485441 CDK15Q96Q40 435 aa9.24□□□□□ -0.93
SRRM1-213ENST00000485441 KCTD15Q96SI1 283 aaPredicted RBP9.24□□□□□ -0.93
SRRM1-213ENST00000485441 GZF1Q9H116 711 aaPredicted RBP9.24□□□□□ -0.93
SRRM1-213ENST00000485441 DNAAF2Q9NVR5 837 aaKnown RBP9.24□□□□□ -0.93
SRRM1-213ENST00000485441 KIAA1024Q9UPX6 916 aa9.24□□□□□ -0.93
SRRM1-213ENST00000485441 PATL2C9JE40 543 aaKnown RBP9.23□□□□□ -0.93
SRRM1-213ENST00000485441 DPYDQ12882 1025 aa9.23□□□□□ -0.93
SRRM1-213ENST00000485441 SIX5Q8N196 739 aa9.23□□□□□ -0.93
SRRM1-213ENST00000485441 FAM200AQ8TCP9 573 aa9.23□□□□□ -0.93
SRRM1-213ENST00000485441 SIAH2O43255 324 aa9.22□□□□□ -0.93
SRRM1-213ENST00000485441 SSFA2P28290 1259 aa9.22□□□□□ -0.93
SRRM1-213ENST00000485441 ATP1A2P50993 1020 aa9.22□□□□□ -0.93
SRRM1-213ENST00000485441 OXLD1Q5BKU9 147 aa9.22□□□□□ -0.93
SRRM1-213ENST00000485441 INTS6LQ5JSJ4 861 aaKnown RBP9.22□□□□□ -0.93
SRRM1-213ENST00000485441 IFFO2Q5TF58 517 aa9.22□□□□□ -0.93
SRRM1-213ENST00000485441 MPNDQ8N594 471 aa9.22□□□□□ -0.93
SRRM1-213ENST00000485441 CLP1Q92989 425 aaKnown RBP9.22□□□□□ -0.93
SRRM1-213ENST00000485441 GRM5P41594 1212 aa9.21□□□□□ -0.94
SRRM1-213ENST00000485441 GTF2IP78347 998 aa9.21□□□□□ -0.94
SRRM1-213ENST00000485441 USP4Q13107 963 aa9.21□□□□□ -0.94
SRRM1-213ENST00000485441 RC3H1Q5TC82 1133 aaKnown RBP9.21□□□□□ -0.94
SRRM1-213ENST00000485441 GNEQ9Y223 722 aaKnown RBP9.21□□□□□ -0.94
SRRM1-213ENST00000485441 PCDHB11Q9Y5F2 797 aa9.21□□□□□ -0.94
SRRM1-213ENST00000485441 CD2BP2O95400 341 aaKnown RBP9.2□□□□□ -0.94
SRRM1-213ENST00000485441 TXNDC2Q86VQ3 553 aa9.2□□□□□ -0.94
SRRM1-213ENST00000485441 ERVH48-1M5A8F1 160 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms