RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 PPP2R2DQ66LE6 453 aa8.84□□□□□ -0.99
SSBP1-211ENST00000484178 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.84□□□□□ -0.99
SSBP1-211ENST00000484178 SH3D19Q5HYK7 790 aa8.83□□□□□ -1
SSBP1-211ENST00000484178 Q6ZVU0 165 aa8.83□□□□□ -1
SSBP1-211ENST00000484178 BCANQ96GW7 911 aa8.83□□□□□ -1
SSBP1-211ENST00000484178 FKBPLQ9UIM3 349 aa8.83□□□□□ -1
SSBP1-211ENST00000484178 DNMT3LQ9UJW3 386 aa8.83□□□□□ -1
SSBP1-211ENST00000484178 ARHGAP9Q9BRR9 750 aa8.81□□□□□ -1
SSBP1-211ENST00000484178 PGPEP1Q9NXJ5 209 aa8.81□□□□□ -1
SSBP1-211ENST00000484178 GPSM3Q9Y4H4 160 aa8.81□□□□□ -1
SSBP1-211ENST00000484178 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.8□□□□□ -1
SSBP1-211ENST00000484178 PPP1R26Q5T8A7 1209 aaPredicted RBP8.8□□□□□ -1
SSBP1-211ENST00000484178 DDRGK1Q96HY6 314 aa8.8□□□□□ -1
SSBP1-211ENST00000484178 CARD14Q9BXL6 1004 aa8.8□□□□□ -1
SSBP1-211ENST00000484178 SPINT1O43278 529 aa8.79□□□□□ -1
SSBP1-211ENST00000484178 DHX9Q08211 1270 aaKnown RBP8.79□□□□□ -1
SSBP1-211ENST00000484178 LRRN4Q8WUT4 740 aa8.79□□□□□ -1
SSBP1-211ENST00000484178 KCTD15Q96SI1 283 aaPredicted RBP8.79□□□□□ -1
SSBP1-211ENST00000484178 TTLL8A6PVC2 850 aa8.78□□□□□ -1
SSBP1-211ENST00000484178 SLC10A4Q96EP9 437 aa8.78□□□□□ -1
SSBP1-211ENST00000484178 PRKCSHP14314 528 aaPredicted RBP8.77□□□□□ -1.01
SSBP1-211ENST00000484178 FBXO31Q5XUX0 539 aaPredicted RBP8.77□□□□□ -1.01
SSBP1-211ENST00000484178 NANOS1Q8WY41 292 aaKnown RBP8.77□□□□□ -1.01
SSBP1-211ENST00000484178 OCSTAMPQ9BR26 566 aa8.77□□□□□ -1.01
SSBP1-211ENST00000484178 PTK2Q05397 1052 aa8.76□□□□□ -1.01
SSBP1-211ENST00000484178 ZBTB33Q86T24 672 aa8.76□□□□□ -1.01
SSBP1-211ENST00000484178 KDM4CQ9H3R0 1056 aa8.76□□□□□ -1.01
SSBP1-211ENST00000484178 PTSQ03393 145 aa8.75□□□□□ -1.01
SSBP1-211ENST00000484178 CBLBQ13191 982 aa8.75□□□□□ -1.01
SSBP1-211ENST00000484178 NR6A1Q15406 480 aa8.75□□□□□ -1.01
SSBP1-211ENST00000484178 PROCA1Q8NCQ7 364 aaPredicted RBP8.75□□□□□ -1.01
SSBP1-211ENST00000484178 INTS6LQ5JSJ4 861 aaKnown RBP8.74□□□□□ -1.01
SSBP1-211ENST00000484178 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
SSBP1-211ENST00000484178 PNMA1Q8ND90 353 aa8.73□□□□□ -1.01
SSBP1-211ENST00000484178 SLC35F4A4IF30 521 aa8.72□□□□□ -1.01
SSBP1-211ENST00000484178 NBPF20Q3BBV1 942 aa8.72□□□□□ -1.01
SSBP1-211ENST00000484178 ADAM32Q8TC27 787 aa8.72□□□□□ -1.01
SSBP1-211ENST00000484178 KRT76Q01546 638 aa8.71□□□□□ -1.02
SSBP1-211ENST00000484178 GPR161Q8N6U8 529 aaKnown RBP8.71□□□□□ -1.02
SSBP1-211ENST00000484178 GPBP1L1Q9HC44 474 aaPredicted RBP8.71□□□□□ -1.02
SSBP1-211ENST00000484178 KCNMA1Q12791 1236 aa8.7□□□□□ -1.02
SSBP1-211ENST00000484178 CCDC155Q8N6L0 562 aa8.7□□□□□ -1.02
SSBP1-211ENST00000484178 AP1G2O75843 785 aa8.69□□□□□ -1.02
SSBP1-211ENST00000484178 GOPCQ9HD26 462 aa8.69□□□□□ -1.02
SSBP1-211ENST00000484178 FIGNL2A6NMB9 653 aa8.68□□□□□ -1.02
SSBP1-211ENST00000484178 ESPNB1AK53 854 aa8.68□□□□□ -1.02
SSBP1-211ENST00000484178 USP17L8P0C7I0 530 aa8.68□□□□□ -1.02
SSBP1-211ENST00000484178 EPS8L1Q8TE68 723 aa8.68□□□□□ -1.02
SSBP1-211ENST00000484178 HMX1Q9NP08 348 aaPredicted RBP8.68□□□□□ -1.02
SSBP1-211ENST00000484178 CTSOP43234 321 aaPredicted RBP8.67□□□□□ -1.02
SSBP1-211ENST00000484178 SEPT12Q8IYM1 358 aa8.67□□□□□ -1.02
SSBP1-211ENST00000484178 TRIM52Q96A61 297 aa8.67□□□□□ -1.02
SSBP1-211ENST00000484178 LILRA1O75019 489 aa8.66□□□□□ -1.02
SSBP1-211ENST00000484178 ADH1AP07327 375 aa8.66□□□□□ -1.02
SSBP1-211ENST00000484178 ITGA6P23229 1130 aa8.66□□□□□ -1.02
SSBP1-211ENST00000484178 RFC5P40937 340 aa8.66□□□□□ -1.02
SSBP1-211ENST00000484178 GSK3AP49840 483 aa8.66□□□□□ -1.02
SSBP1-211ENST00000484178 RNF217Q8TC41 542 aa8.66□□□□□ -1.02
SSBP1-211ENST00000484178 AGBL1Q96MI9 1066 aa8.66□□□□□ -1.02
SSBP1-211ENST00000484178 INSM2Q96T92 566 aaPredicted RBP8.66□□□□□ -1.02
SSBP1-211ENST00000484178 SLURP2P0DP57 97 aa8.65□□□□□ -1.02
SSBP1-211ENST00000484178 RELBQ01201 579 aa8.65□□□□□ -1.02
SSBP1-211ENST00000484178 ZNF784Q8NCA9 323 aaPredicted RBP8.65□□□□□ -1.02
SSBP1-211ENST00000484178 CNTNAP3BQ96NU0 1288 aa8.65□□□□□ -1.02
SSBP1-211ENST00000484178 COL25A1Q9BXS0 654 aaPredicted RBP8.65□□□□□ -1.02
SSBP1-211ENST00000484178 CNTNAP3Q9BZ76 1288 aa8.65□□□□□ -1.02
SSBP1-211ENST00000484178 ERVH48-1M5A8F1 160 aa8.64□□□□□ -1.03
SSBP1-211ENST00000484178 DZIP3Q86Y13 1208 aaKnown RBP8.64□□□□□ -1.03
SSBP1-211ENST00000484178 KDF1Q8NAX2 398 aaPredicted RBP8.64□□□□□ -1.03
SSBP1-211ENST00000484178 TMPRSS4Q9NRS4 437 aa8.64□□□□□ -1.03
SSBP1-211ENST00000484178 SENP3-EIF4A1A0A087X0R7 540 aa8.63□□□□□ -1.03
SSBP1-211ENST00000484178 ADD1P35611 737 aaKnown RBP8.63□□□□□ -1.03
SSBP1-211ENST00000484178 CCDC125Q86Z20 511 aa8.63□□□□□ -1.03
SSBP1-211ENST00000484178 TRIM34Q9BYJ4 488 aa8.63□□□□□ -1.03
SSBP1-211ENST00000484178 PTGIRP43119 386 aa8.62□□□□□ -1.03
SSBP1-211ENST00000484178 TMEM259Q4ZIN3 620 aa8.62□□□□□ -1.03
SSBP1-211ENST00000484178 RNFT1Q5M7Z0 435 aa8.62□□□□□ -1.03
SSBP1-211ENST00000484178 SV2AQ7L0J3 742 aa8.62□□□□□ -1.03
SSBP1-211ENST00000484178 POLMQ9NP87 494 aaPredicted RBP8.62□□□□□ -1.03
SSBP1-211ENST00000484178 ATP1B4Q9UN42 357 aaPredicted RBP8.62□□□□□ -1.03
SSBP1-211ENST00000484178 RNF225M0QZC1 329 aaPredicted RBP8.61□□□□□ -1.03
SSBP1-211ENST00000484178 FOXD4L5Q5VV16 416 aaPredicted RBP8.61□□□□□ -1.03
SSBP1-211ENST00000484178 ADAMTS8Q9UP79 889 aa8.61□□□□□ -1.03
SSBP1-211ENST00000484178 ZNF385CQ66K41 422 aaPredicted RBP8.6□□□□□ -1.03
SSBP1-211ENST00000484178 VWA5B2Q8N398 1253 aa8.6□□□□□ -1.03
SSBP1-211ENST00000484178 ZNF395Q9H8N7 513 aaPredicted RBP8.6□□□□□ -1.03
SSBP1-211ENST00000484178 RNF144AP50876 292 aaPredicted RBP8.59□□□□□ -1.03
SSBP1-211ENST00000484178 TPRNQ4KMQ1 711 aa8.59□□□□□ -1.03
SSBP1-211ENST00000484178 LYSMD3Q7Z3D4 306 aa8.58□□□□□ -1.04
SSBP1-211ENST00000484178 GMCL1Q96IK5 515 aa8.58□□□□□ -1.04
SSBP1-211ENST00000484178 ZBBXA8MT70 800 aa8.57□□□□□ -1.04
SSBP1-211ENST00000484178 SOCS7O14512 581 aa8.57□□□□□ -1.04
SSBP1-211ENST00000484178 ARHGEF15O94989 841 aa8.57□□□□□ -1.04
SSBP1-211ENST00000484178 GPC1P35052 558 aa8.57□□□□□ -1.04
SSBP1-211ENST00000484178 GJD4Q96KN9 370 aaPredicted RBP8.57□□□□□ -1.04
SSBP1-211ENST00000484178 PCMTD1Q96MG8 357 aaPredicted RBP8.57□□□□□ -1.04
SSBP1-211ENST00000484178 CDC14CA4D256 554 aa8.56□□□□□ -1.04
SSBP1-211ENST00000484178 MCCD1P59942 119 aaPredicted RBP8.56□□□□□ -1.04
SSBP1-211ENST00000484178 RASSF7Q02833 373 aa8.56□□□□□ -1.04
SSBP1-211ENST00000484178 TMEM151AQ8N4L1 468 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms