RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 CNGB1Q14028 1251 aaPredicted RBP10.76□□□□□ -0.69
SORT1-205ENST00000483508 CCDC136Q96JN2 1154 aa10.76□□□□□ -0.69
SORT1-205ENST00000483508 ACEP12821 1306 aa10.76□□□□□ -0.69
SORT1-205ENST00000483508 NPC1L1Q9UHC9 1359 aa10.76□□□□□ -0.69
SORT1-205ENST00000483508 RGPD1P0DJD0 1748 aa10.75□□□□□ -0.69
SORT1-205ENST00000483508 ATP7BP35670 1465 aa10.75□□□□□ -0.69
SORT1-205ENST00000483508 ZBTB7CA1YPR0 619 aa10.75□□□□□ -0.69
SORT1-205ENST00000483508 RRP1P56182 461 aaKnown RBP10.75□□□□□ -0.69
SORT1-205ENST00000483508 FAM196AQ6ZSG2 479 aa10.75□□□□□ -0.69
SORT1-205ENST00000483508 SPATA31A1Q5TZJ5 1347 aa10.75□□□□□ -0.69
SORT1-205ENST00000483508 QRICH2Q9H0J4 1663 aa10.75□□□□□ -0.69
SORT1-205ENST00000483508 TRIM37O94972 964 aa10.74□□□□□ -0.69
SORT1-205ENST00000483508 ERICH6Q7L0X2 663 aa10.74□□□□□ -0.69
SORT1-205ENST00000483508 PANK3Q9H999 370 aa10.74□□□□□ -0.69
SORT1-205ENST00000483508 APBA3O96018 575 aa10.73□□□□□ -0.69
SORT1-205ENST00000483508 R3HDM1Q15032 1099 aaKnown RBP10.73□□□□□ -0.69
SORT1-205ENST00000483508 RCAN3Q9UKA8 241 aa10.73□□□□□ -0.69
SORT1-205ENST00000483508 PHRF1Q9P1Y6 1649 aaKnown RBP10.73□□□□□ -0.69
SORT1-205ENST00000483508 CRYBG1Q9Y4K1 1723 aa10.72□□□□□ -0.69
SORT1-205ENST00000483508 PLEKHG3A1L390 1219 aa10.72□□□□□ -0.69
SORT1-205ENST00000483508 EZH2Q15910 746 aaKnown RBP10.72□□□□□ -0.69
SORT1-205ENST00000483508 POLR3AO14802 1390 aaPredicted RBP10.72□□□□□ -0.69
SORT1-205ENST00000483508 NBPF14Q5TI25 921 aa10.71□□□□□ -0.69
SORT1-205ENST00000483508 TCP11L2Q8N4U5 519 aa10.71□□□□□ -0.69
SORT1-205ENST00000483508 CENPJQ9HC77 1338 aaPredicted RBP10.71□□□□□ -0.69
SORT1-205ENST00000483508 CABP2Q9NPB3 220 aa10.71□□□□□ -0.69
SORT1-205ENST00000483508 THSD7AQ9UPZ6 1657 aa10.7□□□□□ -0.7
SORT1-205ENST00000483508 LRP5O75197 1615 aa10.7□□□□□ -0.7
SORT1-205ENST00000483508 PPIP5K1Q6PFW1 1433 aa10.7□□□□□ -0.7
SORT1-205ENST00000483508 SSH2Q76I76 1423 aa10.7□□□□□ -0.7
SORT1-205ENST00000483508 GCP02774 474 aa10.7□□□□□ -0.7
SORT1-205ENST00000483508 CC2D1BQ5T0F9 858 aaKnown RBP10.7□□□□□ -0.7
SORT1-205ENST00000483508 LARP1Q6PKG0 1096 aaKnown RBP10.7□□□□□ -0.7
SORT1-205ENST00000483508 BARGINQ6ZT62 677 aa10.7□□□□□ -0.7
SORT1-205ENST00000483508 THRAP3Q9Y2W1 955 aaKnown RBP10.7□□□□□ -0.7
SORT1-205ENST00000483508 KNSTRNQ9Y448 316 aa10.7□□□□□ -0.7
SORT1-205ENST00000483508 SBNO2Q9Y2G9 1366 aa10.69□□□□□ -0.7
SORT1-205ENST00000483508 NLRP6P59044 892 aa10.69□□□□□ -0.7
SORT1-205ENST00000483508 EP400Q96L91 3159 aa10.69□□□□□ -0.7
SORT1-205ENST00000483508 TOPAZ1Q8N9V7 1692 aa10.69□□□□□ -0.7
SORT1-205ENST00000483508 CABP1Q9NZU7 370 aa10.68□□□□□ -0.7
SORT1-205ENST00000483508 DISP2A7MBM2 1401 aa10.67□□□□□ -0.7
SORT1-205ENST00000483508 TNS1Q9HBL0 1735 aaKnown RBP10.67□□□□□ -0.7
SORT1-205ENST00000483508 EVC2Q86UK5 1308 aa10.67□□□□□ -0.7
SORT1-205ENST00000483508 TCERG1O14776 1098 aaKnown RBP10.67□□□□□ -0.7
SORT1-205ENST00000483508 PPP2R1AP30153 589 aa10.67□□□□□ -0.7
SORT1-205ENST00000483508 TOM1L2Q6ZVM7 507 aa10.67□□□□□ -0.7
SORT1-205ENST00000483508 CAMKK2Q96RR4 588 aa10.67□□□□□ -0.7
SORT1-205ENST00000483508 NRKQ7Z2Y5 1582 aa10.67□□□□□ -0.7
SORT1-205ENST00000483508 CAMTA1Q9Y6Y1 1673 aa10.66□□□□□ -0.7
SORT1-205ENST00000483508 CPDO75976 1380 aa10.66□□□□□ -0.7
SORT1-205ENST00000483508 USP19O94966 1318 aa10.66□□□□□ -0.7
SORT1-205ENST00000483508 WDR43Q15061 677 aaKnown RBP eCLIP10.66□□□□□ -0.7
SORT1-205ENST00000483508 AMER1Q5JTC6 1135 aaPredicted RBP10.66□□□□□ -0.7
SORT1-205ENST00000483508 NGEFQ8N5V2 710 aa10.66□□□□□ -0.7
SORT1-205ENST00000483508 PPP1R1BQ9UD71 204 aaPredicted RBP10.66□□□□□ -0.7
SORT1-205ENST00000483508 DCAF8L1A6NGE4 600 aa10.65□□□□□ -0.7
SORT1-205ENST00000483508 CSB-PGBD3P0DP91 1061 aa10.65□□□□□ -0.7
SORT1-205ENST00000483508 MS4A1P11836 297 aa10.65□□□□□ -0.7
SORT1-205ENST00000483508 SOX12O15370 315 aa10.64□□□□□ -0.71
SORT1-205ENST00000483508 ANP32AP39687 249 aaKnown RBP10.64□□□□□ -0.71
SORT1-205ENST00000483508 DDB1Q16531 1140 aa10.64□□□□□ -0.71
SORT1-205ENST00000483508 EXOC6Q8TAG9 804 aa10.64□□□□□ -0.71
SORT1-205ENST00000483508 ZNF692Q9BU19 519 aaPredicted RBP10.64□□□□□ -0.71
SORT1-205ENST00000483508 USP6P35125 1406 aa10.64□□□□□ -0.71
SORT1-205ENST00000483508 CRB1P82279 1406 aa10.64□□□□□ -0.71
SORT1-205ENST00000483508 KCNH5Q8NCM2 988 aa10.63□□□□□ -0.71
SORT1-205ENST00000483508 LMO7Q8WWI1 1683 aa10.63□□□□□ -0.71
SORT1-205ENST00000483508 COL5A2P05997 1499 aaPredicted RBP10.62□□□□□ -0.71
SORT1-205ENST00000483508 NOP58Q9Y2X3 529 aaKnown RBP10.62□□□□□ -0.71
SORT1-205ENST00000483508 AATKQ6ZMQ8 1374 aa10.62□□□□□ -0.71
SORT1-205ENST00000483508 ZNF521Q96K83 1311 aa10.61□□□□□ -0.71
SORT1-205ENST00000483508 OVOS2A0A0G2JMS6 1433 aa10.61□□□□□ -0.71
SORT1-205ENST00000483508 OVOS2A0A0J9YW53 1432 aa10.61□□□□□ -0.71
SORT1-205ENST00000483508 OVOS2Q6IE36 1432 aa10.61□□□□□ -0.71
SORT1-205ENST00000483508 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.61□□□□□ -0.71
SORT1-205ENST00000483508 CDCA7LQ96GN5 454 aa10.61□□□□□ -0.71
SORT1-205ENST00000483508 CDCA7Q9BWT1 371 aaPredicted RBP10.61□□□□□ -0.71
SORT1-205ENST00000483508 SPON1Q9HCB6 807 aa10.61□□□□□ -0.71
SORT1-205ENST00000483508 ADAMTS8Q9UP79 889 aa10.61□□□□□ -0.71
SORT1-205ENST00000483508 PARP4Q9UKK3 1724 aaKnown RBP10.61□□□□□ -0.71
SORT1-205ENST00000483508 GOLGA2Q08379 1002 aa10.6□□□□□ -0.71
SORT1-205ENST00000483508 IPO9Q96P70 1041 aaKnown RBP10.6□□□□□ -0.71
SORT1-205ENST00000483508 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
SORT1-205ENST00000483508 RREB1Q92766 1687 aa10.6□□□□□ -0.71
SORT1-205ENST00000483508 TTC21BQ7Z4L5 1316 aa10.59□□□□□ -0.71
SORT1-205ENST00000483508 WDR17Q8IZU2 1322 aa10.59□□□□□ -0.71
SORT1-205ENST00000483508 TTC21AQ8NDW8 1320 aa10.59□□□□□ -0.71
SORT1-205ENST00000483508 EXOC5O00471 708 aa10.59□□□□□ -0.71
SORT1-205ENST00000483508 KCNQ2O43526 872 aa10.59□□□□□ -0.71
SORT1-205ENST00000483508 BCL11BQ9C0K0 894 aaPredicted RBP10.59□□□□□ -0.71
SORT1-205ENST00000483508 NUP188Q5SRE5 1749 aa10.58□□□□□ -0.72
SORT1-205ENST00000483508 VIRMAQ69YN4 1812 aaKnown RBP10.58□□□□□ -0.72
SORT1-205ENST00000483508 SENP3-EIF4A1A0A087X0R7 540 aa10.58□□□□□ -0.72
SORT1-205ENST00000483508 PLSCR1O15162 318 aa10.58□□□□□ -0.72
SORT1-205ENST00000483508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.58□□□□□ -0.72
SORT1-205ENST00000483508 PUS7Q96PZ0 661 aaKnown RBP10.58□□□□□ -0.72
SORT1-205ENST00000483508 AXIN2Q9Y2T1 843 aa10.58□□□□□ -0.72
SORT1-205ENST00000483508 SLIT3O75094 1523 aa10.58□□□□□ -0.72
SORT1-205ENST00000483508 CPSF1Q10570 1443 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms