RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 NBPF20Q3BBV1 942 aa9.49□□□□□ -0.89
COL4A5-205ENST00000483338 HSP90AB3PQ58FF7 597 aa9.49□□□□□ -0.89
COL4A5-205ENST00000483338 SYT10Q6XYQ8 523 aa9.49□□□□□ -0.89
COL4A5-205ENST00000483338 PMFBP1Q8TBY8 1022 aa9.49□□□□□ -0.89
COL4A5-205ENST00000483338 KIAA1524Q8TCG1 905 aa9.49□□□□□ -0.89
COL4A5-205ENST00000483338 LCMT1Q9UIC8 334 aa9.49□□□□□ -0.89
COL4A5-205ENST00000483338 ADAMTS8Q9UP79 889 aa9.49□□□□□ -0.89
COL4A5-205ENST00000483338 RAPGEF6Q8TEU7 1601 aa9.49□□□□□ -0.89
COL4A5-205ENST00000483338 ZNF644Q9H582 1327 aaPredicted RBP9.49□□□□□ -0.89
COL4A5-205ENST00000483338 MYO1CO00159 1063 aa9.49□□□□□ -0.89
COL4A5-205ENST00000483338 REC8O95072 547 aa9.49□□□□□ -0.89
COL4A5-205ENST00000483338 DONSONQ9NYP3 566 aa9.49□□□□□ -0.89
COL4A5-205ENST00000483338 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.49□□□□□ -0.89
COL4A5-205ENST00000483338 SH3BP1Q9Y3L3 701 aa9.49□□□□□ -0.89
COL4A5-205ENST00000483338 TROQ12816 1431 aaPredicted RBP9.49□□□□□ -0.89
COL4A5-205ENST00000483338 CFAP65Q6ZU64 1925 aaKnown RBP9.48□□□□□ -0.89
COL4A5-205ENST00000483338 RBM6P78332 1123 aaKnown RBP9.48□□□□□ -0.89
COL4A5-205ENST00000483338 KMT5BQ4FZB7 885 aa9.48□□□□□ -0.89
COL4A5-205ENST00000483338 TRMT2AQ8IZ69 625 aaKnown RBP9.48□□□□□ -0.89
COL4A5-205ENST00000483338 NOL10Q9BSC4 688 aaKnown RBP9.48□□□□□ -0.89
COL4A5-205ENST00000483338 ATG3Q9NT62 314 aa9.48□□□□□ -0.89
COL4A5-205ENST00000483338 PYCARDQ9ULZ3 195 aa9.48□□□□□ -0.89
COL4A5-205ENST00000483338 RAD50Q92878 1312 aa9.48□□□□□ -0.89
COL4A5-205ENST00000483338 SEMA3FQ13275 785 aa9.48□□□□□ -0.89
COL4A5-205ENST00000483338 DRC1Q96MC2 740 aa9.48□□□□□ -0.89
COL4A5-205ENST00000483338 GCC2Q8IWJ2 1684 aa9.47□□□□□ -0.89
COL4A5-205ENST00000483338 GOLIM4O00461 696 aa9.47□□□□□ -0.89
COL4A5-205ENST00000483338 PKP1Q13835 747 aa9.47□□□□□ -0.89
COL4A5-205ENST00000483338 SART3Q15020 963 aaKnown RBP9.47□□□□□ -0.89
COL4A5-205ENST00000483338 MUM1L1Q5H9M0 696 aa9.47□□□□□ -0.89
COL4A5-205ENST00000483338 JRKLQ9Y4A0 524 aa9.47□□□□□ -0.89
COL4A5-205ENST00000483338 CYP2E1P05181 493 aaPredicted RBP9.47□□□□□ -0.89
COL4A5-205ENST00000483338 KIF1BPQ96EK5 621 aa9.47□□□□□ -0.89
COL4A5-205ENST00000483338 SGSM3Q96HU1 749 aa9.47□□□□□ -0.89
COL4A5-205ENST00000483338 NKTRP30414 1462 aaKnown RBP9.47□□□□□ -0.89
COL4A5-205ENST00000483338 USP25Q9UHP3 1055 aa9.46□□□□□ -0.89
COL4A5-205ENST00000483338 ABCC2Q92887 1545 aa9.46□□□□□ -0.89
COL4A5-205ENST00000483338 TNNT1P13805 278 aa9.46□□□□□ -0.89
COL4A5-205ENST00000483338 RBM42Q9BTD8 480 aaKnown RBP9.46□□□□□ -0.89
COL4A5-205ENST00000483338 KCNF1Q9H3M0 494 aa9.46□□□□□ -0.89
COL4A5-205ENST00000483338 TSPY26PQ9H489 355 aa9.46□□□□□ -0.89
COL4A5-205ENST00000483338 ASXL2Q76L83 1435 aa9.46□□□□□ -0.9
COL4A5-205ENST00000483338 MBD5Q9P267 1494 aa9.46□□□□□ -0.9
COL4A5-205ENST00000483338 NEK11Q8NG66 645 aa9.46□□□□□ -0.9
COL4A5-205ENST00000483338 CXorf56Q9H5V9 222 aa9.46□□□□□ -0.9
COL4A5-205ENST00000483338 CCDC189A1A4V9 331 aa9.45□□□□□ -0.9
COL4A5-205ENST00000483338 CHAMP1Q96JM3 812 aa9.45□□□□□ -0.9
COL4A5-205ENST00000483338 SUFUQ9UMX1 484 aa9.45□□□□□ -0.9
COL4A5-205ENST00000483338 ADCY5O95622 1261 aa9.45□□□□□ -0.9
COL4A5-205ENST00000483338 MAP2K1Q02750 393 aaPredicted RBP9.45□□□□□ -0.9
COL4A5-205ENST00000483338 ZNF397Q8NF99 534 aaPredicted RBP9.45□□□□□ -0.9
COL4A5-205ENST00000483338 PLCD4Q9BRC7 762 aa9.45□□□□□ -0.9
COL4A5-205ENST00000483338 SHROOM2Q13796 1616 aa9.45□□□□□ -0.9
COL4A5-205ENST00000483338 GOLGA6L6A8MZA4 724 aa9.45□□□□□ -0.9
COL4A5-205ENST00000483338 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
COL4A5-205ENST00000483338 CCDC9Q9Y3X0 531 aaKnown RBP9.44□□□□□ -0.9
COL4A5-205ENST00000483338 RIMBP3CA6NJZ7 1639 aa9.44□□□□□ -0.9
COL4A5-205ENST00000483338 RIMBP3BA6NNM3 1639 aa9.44□□□□□ -0.9
COL4A5-205ENST00000483338 KIF14Q15058 1648 aa9.44□□□□□ -0.9
COL4A5-205ENST00000483338 RIMBP3Q9UFD9 1639 aa9.44□□□□□ -0.9
COL4A5-205ENST00000483338 SMTNL1A8MU46 457 aa9.44□□□□□ -0.9
COL4A5-205ENST00000483338 RGL3Q3MIN7 710 aa9.44□□□□□ -0.9
COL4A5-205ENST00000483338 KRBA2Q6ZNG9 492 aa9.44□□□□□ -0.9
COL4A5-205ENST00000483338 FAM212AQ96EL1 285 aa9.44□□□□□ -0.9
COL4A5-205ENST00000483338 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.44□□□□□ -0.9
COL4A5-205ENST00000483338 ABCA8O94911 1581 aa9.44□□□□□ -0.9
COL4A5-205ENST00000483338 ATP2B1P20020 1258 aa9.43□□□□□ -0.9
COL4A5-205ENST00000483338 TDO2P48775 406 aa9.43□□□□□ -0.9
COL4A5-205ENST00000483338 NUCB2P80303 420 aa9.43□□□□□ -0.9
COL4A5-205ENST00000483338 FBXO38Q6PIJ6 1188 aa9.43□□□□□ -0.9
COL4A5-205ENST00000483338 RWDD1Q9H446 243 aaPredicted RBP9.43□□□□□ -0.9
COL4A5-205ENST00000483338 RAI14Q9P0K7 980 aa9.43□□□□□ -0.9
COL4A5-205ENST00000483338 PACS2Q86VP3 889 aa9.43□□□□□ -0.9
COL4A5-205ENST00000483338 MED4Q9NPJ6 270 aa9.43□□□□□ -0.9
COL4A5-205ENST00000483338 KIF1CO43896 1103 aaKnown RBP9.42□□□□□ -0.9
COL4A5-205ENST00000483338 GSCP56915 257 aaPredicted RBP9.42□□□□□ -0.9
COL4A5-205ENST00000483338 ST20-MTHFSA0A0A6YYL1 179 aa9.42□□□□□ -0.9
COL4A5-205ENST00000483338 RLBP1P12271 317 aa9.42□□□□□ -0.9
COL4A5-205ENST00000483338 BMS1Q14692 1282 aaKnown RBP9.42□□□□□ -0.9
COL4A5-205ENST00000483338 E2F4Q16254 413 aa9.42□□□□□ -0.9
COL4A5-205ENST00000483338 GTF3C6Q969F1 213 aa9.42□□□□□ -0.9
COL4A5-205ENST00000483338 CCDC191Q8NCU4 936 aa9.42□□□□□ -0.9
COL4A5-205ENST00000483338 UVSSAQ2YD98 709 aa9.41□□□□□ -0.9
COL4A5-205ENST00000483338 SRLQ86TD4 932 aa9.41□□□□□ -0.9
COL4A5-205ENST00000483338 AFAP1Q8N556 730 aa9.41□□□□□ -0.9
COL4A5-205ENST00000483338 TNNQ9UQP3 1299 aa9.41□□□□□ -0.9
COL4A5-205ENST00000483338 ZDHHC9Q9Y397 364 aa9.41□□□□□ -0.9
COL4A5-205ENST00000483338 CD109Q6YHK3 1445 aa9.41□□□□□ -0.9
COL4A5-205ENST00000483338 TXLNBQ8N3L3 684 aa9.41□□□□□ -0.9
COL4A5-205ENST00000483338 A0A1B0GUL7 405 aa9.41□□□□□ -0.9
COL4A5-205ENST00000483338 WDR43Q15061 677 aaKnown RBP eCLIP9.41□□□□□ -0.9
COL4A5-205ENST00000483338 SENP3Q9H4L4 574 aaPredicted RBP9.41□□□□□ -0.9
COL4A5-205ENST00000483338 EHBP1L1Q8N3D4 1523 aa9.4□□□□□ -0.9
COL4A5-205ENST00000483338 UHRF1BP1LA0JNW5 1464 aa9.4□□□□□ -0.9
COL4A5-205ENST00000483338 ZNF853P0CG23 659 aa9.4□□□□□ -0.9
COL4A5-205ENST00000483338 CCDC112Q8NEF3 446 aa9.4□□□□□ -0.9
COL4A5-205ENST00000483338 C16orf45Q96MC5 204 aaPredicted RBP9.4□□□□□ -0.9
COL4A5-205ENST00000483338 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.4□□□□□ -0.9
COL4A5-205ENST00000483338 FBXO3Q9UK99 471 aa9.4□□□□□ -0.9
COL4A5-205ENST00000483338 V9GYY5 206 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms