RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 ABCC6O95255 1503 aa22.9■■□□□ 1.26
SF1-215ENST00000482693 MAP3K19Q56UN5 1328 aa22.89■■□□□ 1.26
SF1-215ENST00000482693 FBLN1P23142 703 aa22.89■■□□□ 1.25
SF1-215ENST00000482693 IP6K1Q92551 441 aa22.89■■□□□ 1.25
SF1-215ENST00000482693 SPATA31A5Q5VU36 1347 aa22.88■■□□□ 1.25
SF1-215ENST00000482693 SPATA31A7Q8IWB4 1347 aa22.88■■□□□ 1.25
SF1-215ENST00000482693 MORC1Q86VD1 984 aa22.88■■□□□ 1.25
SF1-215ENST00000482693 NRAPQ86VF7 1730 aa22.88■■□□□ 1.25
SF1-215ENST00000482693 COL5A2P05997 1499 aaPredicted RBP22.87■■□□□ 1.25
SF1-215ENST00000482693 COL18A1P39060 1754 aa22.87■■□□□ 1.25
SF1-215ENST00000482693 AMPHP49418 695 aa22.87■■□□□ 1.25
SF1-215ENST00000482693 CDK12Q9NYV4 1490 aaPredicted RBP22.86■■□□□ 1.25
SF1-215ENST00000482693 RRS1Q15050 365 aaKnown RBP22.86■■□□□ 1.25
SF1-215ENST00000482693 LARP1Q6PKG0 1096 aaKnown RBP22.86■■□□□ 1.25
SF1-215ENST00000482693 NPC1L1Q9UHC9 1359 aa22.86■■□□□ 1.25
SF1-215ENST00000482693 RTL1A6NKG5 1358 aa22.85■■□□□ 1.25
SF1-215ENST00000482693 KIF24Q5T7B8 1368 aa22.85■■□□□ 1.25
SF1-215ENST00000482693 SPATA31A1Q5TZJ5 1347 aa22.84■■□□□ 1.25
SF1-215ENST00000482693 WDR17Q8IZU2 1322 aa22.84■■□□□ 1.25
SF1-215ENST00000482693 BLMP54132 1417 aaPredicted RBP22.84■■□□□ 1.25
SF1-215ENST00000482693 ONECUT3O60422 494 aaPredicted RBP22.84■■□□□ 1.25
SF1-215ENST00000482693 HOXC9P31274 260 aa22.84■■□□□ 1.25
SF1-215ENST00000482693 CSB-PGBD3P0DP91 1061 aa22.83■■□□□ 1.25
SF1-215ENST00000482693 TNNT2P45379 298 aaPredicted RBP22.83■■□□□ 1.25
SF1-215ENST00000482693 CC2D1BQ5T0F9 858 aaKnown RBP22.82■■□□□ 1.24
SF1-215ENST00000482693 TOM1L2Q6ZVM7 507 aa22.82■■□□□ 1.24
SF1-215ENST00000482693 CRB1P82279 1406 aa22.82■■□□□ 1.24
SF1-215ENST00000482693 LTN1O94822 1766 aa22.81■■□□□ 1.24
SF1-215ENST00000482693 GLI3P10071 1580 aa22.81■■□□□ 1.24
SF1-215ENST00000482693 ANKRD24Q8TF21 1146 aa22.81■■□□□ 1.24
SF1-215ENST00000482693 POLKQ9UBT6 870 aa22.81■■□□□ 1.24
SF1-215ENST00000482693 THRAP3Q9Y2W1 955 aaKnown RBP22.81■■□□□ 1.24
SF1-215ENST00000482693 ANKRD26Q9UPS8 1709 aa22.81■■□□□ 1.24
SF1-215ENST00000482693 ERBB3P21860 1342 aa22.81■■□□□ 1.24
SF1-215ENST00000482693 FLT4P35916 1363 aa22.8■■□□□ 1.24
SF1-215ENST00000482693 TCP11L2Q8N4U5 519 aa22.8■■□□□ 1.24
SF1-215ENST00000482693 EMILIN1Q9Y6C2 1016 aa22.8■■□□□ 1.24
SF1-215ENST00000482693 ZNF316A6NFI3 1004 aaPredicted RBP22.79■■□□□ 1.24
SF1-215ENST00000482693 DDX10Q13206 875 aaKnown RBP22.79■■□□□ 1.24
SF1-215ENST00000482693 FAM98CQ17RN3 349 aaKnown RBP22.79■■□□□ 1.24
SF1-215ENST00000482693 BARGINQ6ZT62 677 aa22.79■■□□□ 1.24
SF1-215ENST00000482693 CARD10Q9BWT7 1032 aa22.79■■□□□ 1.24
SF1-215ENST00000482693 USP35Q9P2H5 1018 aa22.79■■□□□ 1.24
SF1-215ENST00000482693 PPM1GO15355 546 aaPredicted RBP22.78■■□□□ 1.24
SF1-215ENST00000482693 INSRP06213 1382 aa22.77■■□□□ 1.24
SF1-215ENST00000482693 RGS12O14924 1447 aa22.77■■□□□ 1.24
SF1-215ENST00000482693 HSP90AB2PQ58FF8 381 aa22.77■■□□□ 1.24
SF1-215ENST00000482693 SEPT12Q8IYM1 358 aa22.77■■□□□ 1.24
SF1-215ENST00000482693 LTV1Q96GA3 475 aaPredicted RBP22.76■■□□□ 1.23
SF1-215ENST00000482693 NLRP2Q9NX02 1062 aa22.76■■□□□ 1.23
SF1-215ENST00000482693 RGPD5Q99666 1765 aa22.74■■□□□ 1.23
SF1-215ENST00000482693 A0A0G2JS52 829 aa22.73■■□□□ 1.23
SF1-215ENST00000482693 MYT1Q01538 1121 aa22.73■■□□□ 1.23
SF1-215ENST00000482693 CNGB1Q14028 1251 aaPredicted RBP22.73■■□□□ 1.23
SF1-215ENST00000482693 SMG6Q86US8 1419 aaKnown RBP22.73■■□□□ 1.23
SF1-215ENST00000482693 CDCA7Q9BWT1 371 aaPredicted RBP22.72■■□□□ 1.23
SF1-215ENST00000482693 PEAK1Q9H792 1746 aa22.71■■□□□ 1.23
SF1-215ENST00000482693 MAP2P11137 1827 aaKnown RBP22.69■■□□□ 1.22
SF1-215ENST00000482693 MTHFSP49914 203 aa22.68■■□□□ 1.22
SF1-215ENST00000482693 NBPF6Q5VWK0 638 aa22.67■■□□□ 1.22
SF1-215ENST00000482693 KRT27Q7Z3Y8 459 aa22.67■■□□□ 1.22
SF1-215ENST00000482693 NBPF4Q96M43 638 aa22.67■■□□□ 1.22
SF1-215ENST00000482693 THSD7AQ9UPZ6 1657 aa22.66■■□□□ 1.22
SF1-215ENST00000482693 FAM208AQ9UK61 1670 aaKnown RBP22.65■■□□□ 1.22
SF1-215ENST00000482693 IL2RBP14784 551 aa22.65■■□□□ 1.22
SF1-215ENST00000482693 EIF4A2Q14240 407 aaKnown RBP22.65■■□□□ 1.22
SF1-215ENST00000482693 SOCS7O14512 581 aa22.64■■□□□ 1.21
SF1-215ENST00000482693 PDE3BQ13370 1112 aa22.63■■□□□ 1.21
SF1-215ENST00000482693 DDB1Q16531 1140 aa22.63■■□□□ 1.21
SF1-215ENST00000482693 DISP2A7MBM2 1401 aa22.63■■□□□ 1.21
SF1-215ENST00000482693 PPP2R1AP30153 589 aa22.62■■□□□ 1.21
SF1-215ENST00000482693 RALBP1Q15311 655 aa22.62■■□□□ 1.21
SF1-215ENST00000482693 PARD3Q8TEW0 1356 aa22.62■■□□□ 1.21
SF1-215ENST00000482693 EXOC5O00471 708 aa22.61■■□□□ 1.21
SF1-215ENST00000482693 EYA1Q99502 592 aa22.61■■□□□ 1.21
SF1-215ENST00000482693 USHBP1Q8N6Y0 703 aa22.6■■□□□ 1.21
SF1-215ENST00000482693 PARP4Q9UKK3 1724 aaKnown RBP22.58■■□□□ 1.21
SF1-215ENST00000482693 IL13P35225 146 aa22.58■■□□□ 1.21
SF1-215ENST00000482693 RAPGEF4Q8WZA2 1011 aa22.58■■□□□ 1.21
SF1-215ENST00000482693 CFAP53Q96M91 514 aa22.58■■□□□ 1.21
SF1-215ENST00000482693 DIAPH1O60610 1272 aaKnown RBP22.57■■□□□ 1.2
SF1-215ENST00000482693 BRWD3Q6RI45 1802 aa22.57■■□□□ 1.2
SF1-215ENST00000482693 NCAPD2Q15021 1401 aa22.57■■□□□ 1.2
SF1-215ENST00000482693 IGSF1Q8N6C5 1336 aa22.56■■□□□ 1.2
SF1-215ENST00000482693 TATP17735 454 aaPredicted RBP22.55■■□□□ 1.2
SF1-215ENST00000482693 FAM196AQ6ZSG2 479 aa22.55■■□□□ 1.2
SF1-215ENST00000482693 WNK3Q9BYP7 1800 aa22.54■■□□□ 1.2
SF1-215ENST00000482693 RGPD2P0DJD1 1756 aa22.53■■□□□ 1.2
SF1-215ENST00000482693 FAM182BQ5T319 152 aa22.53■■□□□ 1.2
SF1-215ENST00000482693 ZCRB1Q8TBF4 217 aaKnown RBP22.53■■□□□ 1.2
SF1-215ENST00000482693 UPF1Q92900 1129 aaKnown RBP eCLIP22.53■■□□□ 1.2
SF1-215ENST00000482693 TNS2Q63HR2 1409 aa22.53■■□□□ 1.2
SF1-215ENST00000482693 LRRC37A3O60309 1634 aa22.53■■□□□ 1.2
SF1-215ENST00000482693 OVOS2A0A0G2JMS6 1433 aa22.52■■□□□ 1.2
SF1-215ENST00000482693 CCDC125Q86Z20 511 aa22.52■■□□□ 1.2
SF1-215ENST00000482693 MARCH10Q8NA82 808 aaPredicted RBP22.52■■□□□ 1.2
SF1-215ENST00000482693 MEGF6O75095 1541 aa22.52■■□□□ 1.19
SF1-215ENST00000482693 PRKRIP1Q9H875 184 aaPredicted RBP22.5■■□□□ 1.19
SF1-215ENST00000482693 PLEKHG2Q9H7P9 1386 aa22.5■■□□□ 1.19
SF1-215ENST00000482693 COL3A1P02461 1466 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms