RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 CD44P16070 742 aaKnown RBP10.51□□□□□ -0.73
CHD6-209ENST00000482596 MNX1P50219 401 aaPredicted RBP10.51□□□□□ -0.73
CHD6-209ENST00000482596 TXNRD1Q16881 649 aa10.51□□□□□ -0.73
CHD6-209ENST00000482596 HFM1A2PYH4 1435 aa10.5□□□□□ -0.73
CHD6-209ENST00000482596 NAIPQ13075 1403 aa10.5□□□□□ -0.73
CHD6-209ENST00000482596 E9PCH4 1651 aa10.5□□□□□ -0.73
CHD6-209ENST00000482596 ARHGEF10O15013 1369 aa10.5□□□□□ -0.73
CHD6-209ENST00000482596 FMN2Q9NZ56 1722 aa10.5□□□□□ -0.73
CHD6-209ENST00000482596 CRYBG1Q9Y4K1 1723 aa10.5□□□□□ -0.73
CHD6-209ENST00000482596 BARGINQ6ZT62 677 aa10.49□□□□□ -0.73
CHD6-209ENST00000482596 PARP4Q9UKK3 1724 aaKnown RBP10.49□□□□□ -0.73
CHD6-209ENST00000482596 SBNO1A3KN83 1393 aa10.49□□□□□ -0.73
CHD6-209ENST00000482596 PAPPAQ13219 1627 aa10.48□□□□□ -0.73
CHD6-209ENST00000482596 NMRK2Q9NPI5 230 aa10.48□□□□□ -0.73
CHD6-209ENST00000482596 USP19O94966 1318 aa10.48□□□□□ -0.73
CHD6-209ENST00000482596 OVOS2A0A0G2JMS6 1433 aa10.48□□□□□ -0.73
CHD6-209ENST00000482596 OVOS2A0A0J9YW53 1432 aa10.48□□□□□ -0.73
CHD6-209ENST00000482596 OVOS2Q6IE36 1432 aa10.48□□□□□ -0.73
CHD6-209ENST00000482596 PRAG1Q86YV5 1406 aa10.48□□□□□ -0.73
CHD6-209ENST00000482596 TULP4Q9NRJ4 1543 aa10.48□□□□□ -0.73
CHD6-209ENST00000482596 PDE4DIPQ5VU43 2346 aa10.47□□□□□ -0.73
CHD6-209ENST00000482596 PSME1Q06323 249 aa10.47□□□□□ -0.73
CHD6-209ENST00000482596 CHRNA2Q15822 529 aa10.47□□□□□ -0.73
CHD6-209ENST00000482596 ABHD8Q96I13 439 aa10.47□□□□□ -0.73
CHD6-209ENST00000482596 POLD1P28340 1107 aa10.46□□□□□ -0.73
CHD6-209ENST00000482596 RGS19P49795 217 aa10.46□□□□□ -0.73
CHD6-209ENST00000482596 RBM46Q8TBY0 533 aaKnown RBP10.46□□□□□ -0.73
CHD6-209ENST00000482596 PRDM11Q9NQV5 511 aa10.46□□□□□ -0.73
CHD6-209ENST00000482596 TRPM3Q9HCF6 1732 aaPredicted RBP10.45□□□□□ -0.74
CHD6-209ENST00000482596 ALS2Q96Q42 1657 aa10.45□□□□□ -0.74
CHD6-209ENST00000482596 PHRF1Q9P1Y6 1649 aaKnown RBP10.45□□□□□ -0.74
CHD6-209ENST00000482596 MYOM3Q5VTT5 1437 aa10.45□□□□□ -0.74
CHD6-209ENST00000482596 DHX57Q6P158 1386 aaKnown RBP10.45□□□□□ -0.74
CHD6-209ENST00000482596 ZNF827Q17R98 1081 aa10.45□□□□□ -0.74
CHD6-209ENST00000482596 ZNF326Q5BKZ1 582 aaKnown RBP10.45□□□□□ -0.74
CHD6-209ENST00000482596 ATP7BP35670 1465 aa10.44□□□□□ -0.74
CHD6-209ENST00000482596 PHF8Q9UPP1 1060 aa10.44□□□□□ -0.74
CHD6-209ENST00000482596 SSH2Q76I76 1423 aa10.43□□□□□ -0.74
CHD6-209ENST00000482596 FOXN1O15353 648 aa10.43□□□□□ -0.74
CHD6-209ENST00000482596 PMFBP1Q8TBY8 1022 aa10.43□□□□□ -0.74
CHD6-209ENST00000482596 LRRC37A3O60309 1634 aa10.43□□□□□ -0.74
CHD6-209ENST00000482596 NRXN1Q9ULB1 1477 aa10.42□□□□□ -0.74
CHD6-209ENST00000482596 TUBGCP6Q96RT7 1819 aa10.42□□□□□ -0.74
CHD6-209ENST00000482596 KIAA0232Q92628 1395 aa10.42□□□□□ -0.74
CHD6-209ENST00000482596 PAK3O75914 559 aaPredicted RBP10.42□□□□□ -0.74
CHD6-209ENST00000482596 LARP1Q6PKG0 1096 aaKnown RBP10.42□□□□□ -0.74
CHD6-209ENST00000482596 ZBTB47Q9UFB7 747 aaPredicted RBP10.42□□□□□ -0.74
CHD6-209ENST00000482596 FSTL1Q12841 308 aa10.41□□□□□ -0.74
CHD6-209ENST00000482596 WAPLQ7Z5K2 1190 aa10.41□□□□□ -0.74
CHD6-209ENST00000482596 TCP11L2Q8N4U5 519 aa10.41□□□□□ -0.74
CHD6-209ENST00000482596 CHIC2Q9UKJ5 165 aa10.41□□□□□ -0.74
CHD6-209ENST00000482596 C11orf95C9JLR9 678 aaPredicted RBP10.4□□□□□ -0.74
CHD6-209ENST00000482596 VASPP50552 380 aaPredicted RBP10.4□□□□□ -0.74
CHD6-209ENST00000482596 PRDM10Q9NQV6 1147 aa10.4□□□□□ -0.74
CHD6-209ENST00000482596 QSER1Q2KHR3 1735 aa10.4□□□□□ -0.74
CHD6-209ENST00000482596 IFT172Q9UG01 1749 aa10.4□□□□□ -0.74
CHD6-209ENST00000482596 CCDC85CA6NKD9 419 aa10.39□□□□□ -0.75
CHD6-209ENST00000482596 PLEKHH1Q9ULM0 1364 aa10.39□□□□□ -0.75
CHD6-209ENST00000482596 EVA1CP58658 441 aa10.38□□□□□ -0.75
CHD6-209ENST00000482596 C16orf71Q8IYS4 520 aaPredicted RBP10.38□□□□□ -0.75
CHD6-209ENST00000482596 SLC16A10Q8TF71 515 aa10.38□□□□□ -0.75
CHD6-209ENST00000482596 AKAP12Q02952 1782 aa10.38□□□□□ -0.75
CHD6-209ENST00000482596 PNPLA7Q6ZV29 1317 aa10.37□□□□□ -0.75
CHD6-209ENST00000482596 DAPK1P53355 1430 aa10.37□□□□□ -0.75
CHD6-209ENST00000482596 ZC3H6P61129 1189 aaKnown RBP10.36□□□□□ -0.75
CHD6-209ENST00000482596 MARCH10Q8NA82 808 aaPredicted RBP10.36□□□□□ -0.75
CHD6-209ENST00000482596 CLTCL1P53675 1640 aa10.36□□□□□ -0.75
CHD6-209ENST00000482596 GABBR2O75899 941 aa10.35□□□□□ -0.75
CHD6-209ENST00000482596 ZNF579Q8NAF0 562 aaKnown RBP10.35□□□□□ -0.75
CHD6-209ENST00000482596 LRRC4BQ9NT99 713 aa10.35□□□□□ -0.75
CHD6-209ENST00000482596 ANKRD30AQ9BXX3 1397 aa10.35□□□□□ -0.75
CHD6-209ENST00000482596 CICQ96RK0 1608 aaPredicted RBP10.34□□□□□ -0.75
CHD6-209ENST00000482596 TSPYL2Q9H2G4 693 aaPredicted RBP10.34□□□□□ -0.75
CHD6-209ENST00000482596 THRAP3Q9Y2W1 955 aaKnown RBP10.34□□□□□ -0.75
CHD6-209ENST00000482596 LMO7Q8WWI1 1683 aa10.34□□□□□ -0.75
CHD6-209ENST00000482596 LBX1P52954 281 aa10.33□□□□□ -0.76
CHD6-209ENST00000482596 DDB1Q16531 1140 aa10.33□□□□□ -0.76
CHD6-209ENST00000482596 CLCN6P51797 869 aa10.32□□□□□ -0.76
CHD6-209ENST00000482596 STK26Q9P289 416 aa10.32□□□□□ -0.76
CHD6-209ENST00000482596 BCL9O00512 1426 aa10.32□□□□□ -0.76
CHD6-209ENST00000482596 WNK3Q9BYP7 1800 aa10.31□□□□□ -0.76
CHD6-209ENST00000482596 CTCFP49711 727 aaPredicted RBP10.31□□□□□ -0.76
CHD6-209ENST00000482596 MSL1Q68DK7 614 aa10.31□□□□□ -0.76
CHD6-209ENST00000482596 RASEFQ8IZ41 740 aa10.31□□□□□ -0.76
CHD6-209ENST00000482596 NHSQ6T4R5 1651 aa10.31□□□□□ -0.76
CHD6-209ENST00000482596 IGSF1Q8N6C5 1336 aa10.31□□□□□ -0.76
CHD6-209ENST00000482596 KCPQ6ZWJ8 1503 aa10.3□□□□□ -0.76
CHD6-209ENST00000482596 CD2APQ9Y5K6 639 aa10.3□□□□□ -0.76
CHD6-209ENST00000482596 BTAF1O14981 1849 aa10.3□□□□□ -0.76
CHD6-209ENST00000482596 NUBP1P53384 320 aa10.29□□□□□ -0.76
CHD6-209ENST00000482596 SMC1BQ8NDV3 1235 aa10.29□□□□□ -0.76
CHD6-209ENST00000482596 CFAP44Q96MT7 982 aa10.29□□□□□ -0.76
CHD6-209ENST00000482596 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
CHD6-209ENST00000482596 MKRN1Q9UHC7 482 aaKnown RBP10.29□□□□□ -0.76
CHD6-209ENST00000482596 ANKRD50Q9ULJ7 1429 aa10.29□□□□□ -0.76
CHD6-209ENST00000482596 RRAGCQ9HB90 399 aa10.28□□□□□ -0.76
CHD6-209ENST00000482596 ACSBG1Q96GR2 724 aa10.27□□□□□ -0.77
CHD6-209ENST00000482596 TFCP2L1Q9NZI6 479 aa10.27□□□□□ -0.77
CHD6-209ENST00000482596 COL5A2P05997 1499 aaPredicted RBP10.27□□□□□ -0.77
CHD6-209ENST00000482596 ACIN1Q9UKV3 1341 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms