RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 SF3B2Q13435 895 aaKnown RBP10.98□□□□□ -0.65
CCNC-204ENST00000482541 MIER1Q8N108 512 aa10.98□□□□□ -0.65
CCNC-204ENST00000482541 STRN4Q9NRL3 753 aa10.98□□□□□ -0.65
CCNC-204ENST00000482541 PUS7Q96PZ0 661 aaKnown RBP10.98□□□□□ -0.65
CCNC-204ENST00000482541 NRKQ7Z2Y5 1582 aa10.97□□□□□ -0.65
CCNC-204ENST00000482541 BARGINQ6ZT62 677 aa10.97□□□□□ -0.65
CCNC-204ENST00000482541 TTC21AQ8NDW8 1320 aa10.97□□□□□ -0.65
CCNC-204ENST00000482541 CPSF1Q10570 1443 aaKnown RBP10.96□□□□□ -0.65
CCNC-204ENST00000482541 KCNH5Q8NCM2 988 aa10.96□□□□□ -0.65
CCNC-204ENST00000482541 ZRANB1Q9UGI0 708 aa10.96□□□□□ -0.65
CCNC-204ENST00000482541 TTC21BQ7Z4L5 1316 aa10.96□□□□□ -0.65
CCNC-204ENST00000482541 CAMTA1Q9Y6Y1 1673 aa10.96□□□□□ -0.65
CCNC-204ENST00000482541 THRAP3Q9Y2W1 955 aaKnown RBP10.95□□□□□ -0.66
CCNC-204ENST00000482541 LMO7Q8WWI1 1683 aa10.95□□□□□ -0.66
CCNC-204ENST00000482541 AKAP12Q02952 1782 aa10.95□□□□□ -0.66
CCNC-204ENST00000482541 LARP1Q6PKG0 1096 aaKnown RBP10.95□□□□□ -0.66
CCNC-204ENST00000482541 TCP11L2Q8N4U5 519 aa10.95□□□□□ -0.66
CCNC-204ENST00000482541 USP35Q9P2H5 1018 aa10.95□□□□□ -0.66
CCNC-204ENST00000482541 AATKQ6ZMQ8 1374 aa10.95□□□□□ -0.66
CCNC-204ENST00000482541 KTN1Q86UP2 1357 aaKnown RBP10.95□□□□□ -0.66
CCNC-204ENST00000482541 SLIT3O75094 1523 aa10.94□□□□□ -0.66
CCNC-204ENST00000482541 THSD7AQ9UPZ6 1657 aa10.94□□□□□ -0.66
CCNC-204ENST00000482541 TIMELESSQ9UNS1 1208 aa10.94□□□□□ -0.66
CCNC-204ENST00000482541 EP400Q96L91 3159 aa10.94□□□□□ -0.66
CCNC-204ENST00000482541 DEFB132Q7Z7B7 95 aa10.93□□□□□ -0.66
CCNC-204ENST00000482541 PIK3C2AO00443 1686 aa10.93□□□□□ -0.66
CCNC-204ENST00000482541 ST20-MTHFSA0A0A6YYL1 179 aa10.92□□□□□ -0.66
CCNC-204ENST00000482541 BAG6P46379 1132 aa10.92□□□□□ -0.66
CCNC-204ENST00000482541 FAM196AQ6ZSG2 479 aa10.92□□□□□ -0.66
CCNC-204ENST00000482541 HDGFL2Q7Z4V5 671 aaPredicted RBP10.92□□□□□ -0.66
CCNC-204ENST00000482541 ARHGEF25Q86VW2 580 aa10.92□□□□□ -0.66
CCNC-204ENST00000482541 TMC1Q8TDI8 760 aa10.92□□□□□ -0.66
CCNC-204ENST00000482541 SLC12A5Q9H2X9 1139 aa10.92□□□□□ -0.66
CCNC-204ENST00000482541 TERF2IPQ9NYB0 399 aa10.92□□□□□ -0.66
CCNC-204ENST00000482541 COL5A2P05997 1499 aaPredicted RBP10.92□□□□□ -0.66
CCNC-204ENST00000482541 CLSPNQ9HAW4 1339 aa10.92□□□□□ -0.66
CCNC-204ENST00000482541 PDE3BQ13370 1112 aa10.92□□□□□ -0.66
CCNC-204ENST00000482541 TESK2Q96S53 571 aa10.92□□□□□ -0.66
CCNC-204ENST00000482541 CRB1P82279 1406 aa10.91□□□□□ -0.66
CCNC-204ENST00000482541 FAM182BQ5T319 152 aa10.91□□□□□ -0.66
CCNC-204ENST00000482541 MON2Q7Z3U7 1717 aa10.9□□□□□ -0.66
CCNC-204ENST00000482541 USP31Q70CQ4 1352 aa10.9□□□□□ -0.66
CCNC-204ENST00000482541 ZBTB7CA1YPR0 619 aa10.9□□□□□ -0.66
CCNC-204ENST00000482541 C11orf95C9JLR9 678 aaPredicted RBP10.9□□□□□ -0.66
CCNC-204ENST00000482541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.9□□□□□ -0.66
CCNC-204ENST00000482541 AXIN2Q9Y2T1 843 aa10.9□□□□□ -0.66
CCNC-204ENST00000482541 CD163L1Q9NR16 1453 aa10.9□□□□□ -0.66
CCNC-204ENST00000482541 NINLQ9Y2I6 1382 aa10.9□□□□□ -0.66
CCNC-204ENST00000482541 TOM1L2Q6ZVM7 507 aa10.89□□□□□ -0.67
CCNC-204ENST00000482541 COL18A1P39060 1754 aa10.89□□□□□ -0.67
CCNC-204ENST00000482541 WDR17Q8IZU2 1322 aa10.89□□□□□ -0.67
CCNC-204ENST00000482541 RBM42Q9BTD8 480 aaKnown RBP10.89□□□□□ -0.67
CCNC-204ENST00000482541 EDC4Q6P2E9 1401 aaKnown RBP10.89□□□□□ -0.67
CCNC-204ENST00000482541 RGPD1P0DJD0 1748 aa10.88□□□□□ -0.67
CCNC-204ENST00000482541 CDCA7Q9BWT1 371 aaPredicted RBP10.88□□□□□ -0.67
CCNC-204ENST00000482541 SOX12O15370 315 aa10.87□□□□□ -0.67
CCNC-204ENST00000482541 TRIM37O94972 964 aa10.87□□□□□ -0.67
CCNC-204ENST00000482541 TMF1P82094 1093 aa10.87□□□□□ -0.67
CCNC-204ENST00000482541 EN1Q05925 392 aaPredicted RBP10.87□□□□□ -0.67
CCNC-204ENST00000482541 NME9Q86XW9 330 aa10.87□□□□□ -0.67
CCNC-204ENST00000482541 PCGF6Q9BYE7 350 aa10.87□□□□□ -0.67
CCNC-204ENST00000482541 DISP2A7MBM2 1401 aa10.87□□□□□ -0.67
CCNC-204ENST00000482541 A0A1W2PP64 1363 aa10.87□□□□□ -0.67
CCNC-204ENST00000482541 CARD10Q9BWT7 1032 aa10.87□□□□□ -0.67
CCNC-204ENST00000482541 USP54Q70EL1 1684 aa10.86□□□□□ -0.67
CCNC-204ENST00000482541 NFAT5O94916 1531 aa10.86□□□□□ -0.67
CCNC-204ENST00000482541 PARP4Q9UKK3 1724 aaKnown RBP10.86□□□□□ -0.67
CCNC-204ENST00000482541 ECM2O94769 699 aaPredicted RBP10.86□□□□□ -0.67
CCNC-204ENST00000482541 CSB-PGBD3P0DP91 1061 aa10.86□□□□□ -0.67
CCNC-204ENST00000482541 DDB1Q16531 1140 aa10.86□□□□□ -0.67
CCNC-204ENST00000482541 CDCA8Q53HL2 280 aa10.86□□□□□ -0.67
CCNC-204ENST00000482541 ABCC6O95255 1503 aa10.86□□□□□ -0.67
CCNC-204ENST00000482541 USP47Q96K76 1375 aa10.86□□□□□ -0.67
CCNC-204ENST00000482541 RGPD5Q99666 1765 aa10.85□□□□□ -0.67
CCNC-204ENST00000482541 APBA3O96018 575 aa10.85□□□□□ -0.67
CCNC-204ENST00000482541 AKT1S1Q96B36 256 aa10.85□□□□□ -0.67
CCNC-204ENST00000482541 ZBTB47Q9UFB7 747 aaPredicted RBP10.85□□□□□ -0.67
CCNC-204ENST00000482541 CAMKK2Q96RR4 588 aa10.84□□□□□ -0.67
CCNC-204ENST00000482541 PARD3Q8TEW0 1356 aa10.84□□□□□ -0.67
CCNC-204ENST00000482541 TNS1Q9HBL0 1735 aaKnown RBP10.84□□□□□ -0.67
CCNC-204ENST00000482541 CCDC7Q96M83 1385 aa10.84□□□□□ -0.67
CCNC-204ENST00000482541 ANKRD36BQ8N2N9 1353 aa10.83□□□□□ -0.68
CCNC-204ENST00000482541 EXOC5O00471 708 aa10.83□□□□□ -0.68
CCNC-204ENST00000482541 EZH2Q15910 746 aaKnown RBP10.83□□□□□ -0.68
CCNC-204ENST00000482541 COG3Q96JB2 828 aa10.83□□□□□ -0.68
CCNC-204ENST00000482541 ERBB3P21860 1342 aa10.83□□□□□ -0.68
CCNC-204ENST00000482541 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
CCNC-204ENST00000482541 OVOS2A0A0G2JMS6 1433 aa10.82□□□□□ -0.68
CCNC-204ENST00000482541 OVOS2A0A0J9YW53 1432 aa10.82□□□□□ -0.68
CCNC-204ENST00000482541 OVOS2Q6IE36 1432 aa10.82□□□□□ -0.68
CCNC-204ENST00000482541 SPDYE1Q8NFV5 336 aaPredicted RBP10.81□□□□□ -0.68
CCNC-204ENST00000482541 IP6K1Q92551 441 aa10.81□□□□□ -0.68
CCNC-204ENST00000482541 BCL9O00512 1426 aa10.81□□□□□ -0.68
CCNC-204ENST00000482541 LTN1O94822 1766 aa10.81□□□□□ -0.68
CCNC-204ENST00000482541 NLRP2Q9NX02 1062 aa10.81□□□□□ -0.68
CCNC-204ENST00000482541 LRRC37A3O60309 1634 aa10.8□□□□□ -0.68
CCNC-204ENST00000482541 PEAK1Q9H792 1746 aa10.8□□□□□ -0.68
CCNC-204ENST00000482541 FYB1O15117 783 aa10.8□□□□□ -0.68
CCNC-204ENST00000482541 PLSCR1O15162 318 aa10.8□□□□□ -0.68
CCNC-204ENST00000482541 MARCH10Q8NA82 808 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms