RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 NUDT12Q9BQG2 462 aa13.2□□□□□ -0.3
PDCD4-206ENST00000481353 ELOAQ14241 798 aaKnown RBP13.19□□□□□ -0.3
PDCD4-206ENST00000481353 KANK4Q5T7N3 995 aaPredicted RBP13.19□□□□□ -0.3
PDCD4-206ENST00000481353 VRTNQ9H8Y1 702 aa13.19□□□□□ -0.3
PDCD4-206ENST00000481353 CCDC180Q9P1Z9 1646 aa13.19□□□□□ -0.3
PDCD4-206ENST00000481353 CARNS1A5YM72 827 aa13.18□□□□□ -0.3
PDCD4-206ENST00000481353 CDCA8Q53HL2 280 aa13.18□□□□□ -0.3
PDCD4-206ENST00000481353 TRAF7Q6Q0C0 670 aa13.18□□□□□ -0.3
PDCD4-206ENST00000481353 DCAF1Q9Y4B6 1507 aa13.17□□□□□ -0.3
PDCD4-206ENST00000481353 MAP10Q9P2G4 905 aa13.16□□□□□ -0.3
PDCD4-206ENST00000481353 PIK3CDO00329 1044 aa13.15□□□□□ -0.3
PDCD4-206ENST00000481353 CD2BP2O95400 341 aaKnown RBP13.15□□□□□ -0.3
PDCD4-206ENST00000481353 PLEKHM2Q8IWE5 1019 aa13.15□□□□□ -0.3
PDCD4-206ENST00000481353 TOR4AQ9NXH8 423 aa13.15□□□□□ -0.3
PDCD4-206ENST00000481353 MTMR7Q9Y216 660 aa13.15□□□□□ -0.3
PDCD4-206ENST00000481353 GPSM3Q9Y4H4 160 aa13.15□□□□□ -0.3
PDCD4-206ENST00000481353 FAM187AA6NFU0 413 aa13.14□□□□□ -0.31
PDCD4-206ENST00000481353 ZBTB24O43167 697 aaPredicted RBP13.14□□□□□ -0.31
PDCD4-206ENST00000481353 ZNF592Q92610 1267 aa13.14□□□□□ -0.31
PDCD4-206ENST00000481353 CCNYL3P0C7X3 344 aa13.13□□□□□ -0.31
PDCD4-206ENST00000481353 MYT1Q01538 1121 aa13.13□□□□□ -0.31
PDCD4-206ENST00000481353 GPKOWQ92917 476 aaPredicted RBP eCLIP13.13□□□□□ -0.31
PDCD4-206ENST00000481353 MRGPRX2Q96LB1 330 aa13.13□□□□□ -0.31
PDCD4-206ENST00000481353 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
PDCD4-206ENST00000481353 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
PDCD4-206ENST00000481353 USP17L2Q6R6M4 530 aa13.12□□□□□ -0.31
PDCD4-206ENST00000481353 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
PDCD4-206ENST00000481353 IVNS1ABPQ9Y6Y0 642 aa13.12□□□□□ -0.31
PDCD4-206ENST00000481353 ST8SIA5O15466 376 aa13.11□□□□□ -0.31
PDCD4-206ENST00000481353 B4GALNT3Q6L9W6 998 aa13.11□□□□□ -0.31
PDCD4-206ENST00000481353 PDXDC2PQ6P474 469 aa13.11□□□□□ -0.31
PDCD4-206ENST00000481353 ARMC2Q8NEN0 867 aa13.11□□□□□ -0.31
PDCD4-206ENST00000481353 USP17L5A8MUK1 530 aa13.1□□□□□ -0.31
PDCD4-206ENST00000481353 CTHP32929 405 aa13.1□□□□□ -0.31
PDCD4-206ENST00000481353 MCCD1P59942 119 aaPredicted RBP13.1□□□□□ -0.31
PDCD4-206ENST00000481353 EVA1BQ9NVM1 165 aa13.1□□□□□ -0.31
PDCD4-206ENST00000481353 ZMIZ1Q9ULJ6 1067 aa13.1□□□□□ -0.31
PDCD4-206ENST00000481353 WNT7AO00755 349 aa13.09□□□□□ -0.31
PDCD4-206ENST00000481353 SKIP12755 728 aa13.09□□□□□ -0.31
PDCD4-206ENST00000481353 ZEB1P37275 1124 aaPredicted RBP13.09□□□□□ -0.31
PDCD4-206ENST00000481353 LINC01559Q495D7 138 aa13.09□□□□□ -0.31
PDCD4-206ENST00000481353 UNC93B1Q9H1C4 597 aa13.09□□□□□ -0.31
PDCD4-206ENST00000481353 GNEQ9Y223 722 aaKnown RBP13.09□□□□□ -0.31
PDCD4-206ENST00000481353 J3QL48 77 aa13.08□□□□□ -0.32
PDCD4-206ENST00000481353 PTK2Q05397 1052 aa13.08□□□□□ -0.32
PDCD4-206ENST00000481353 PKDCCQ504Y2 493 aa13.08□□□□□ -0.32
PDCD4-206ENST00000481353 RC3H1Q5TC82 1133 aaKnown RBP13.08□□□□□ -0.32
PDCD4-206ENST00000481353 FAM174AQ8TBP5 190 aa13.08□□□□□ -0.32
PDCD4-206ENST00000481353 PCGF6Q9BYE7 350 aa13.08□□□□□ -0.32
PDCD4-206ENST00000481353 FAM196BA6NMK8 535 aa13.07□□□□□ -0.32
PDCD4-206ENST00000481353 POTECB2RU33 542 aa13.07□□□□□ -0.32
PDCD4-206ENST00000481353 SH3BP2P78314 561 aa13.07□□□□□ -0.32
PDCD4-206ENST00000481353 KCNH2Q12809 1159 aa13.07□□□□□ -0.32
PDCD4-206ENST00000481353 TMEM164Q5U3C3 297 aa13.07□□□□□ -0.32
PDCD4-206ENST00000481353 SND1Q7KZF4 910 aaKnown RBP eCLIP13.06□□□□□ -0.32
PDCD4-206ENST00000481353 BAP1Q92560 729 aa13.06□□□□□ -0.32
PDCD4-206ENST00000481353 OCSTAMPQ9BR26 566 aa13.06□□□□□ -0.32
PDCD4-206ENST00000481353 CEP126Q9P2H0 1117 aa13.06□□□□□ -0.32
PDCD4-206ENST00000481353 DACH1Q9UI36 760 aa13.06□□□□□ -0.32
PDCD4-206ENST00000481353 NOVA2Q9UNW9 492 aaKnown RBP13.06□□□□□ -0.32
PDCD4-206ENST00000481353 LZTS3O60299 673 aaPredicted RBP13.05□□□□□ -0.32
PDCD4-206ENST00000481353 DGAT1O75907 488 aa13.05□□□□□ -0.32
PDCD4-206ENST00000481353 SMPD1P17405 629 aa13.05□□□□□ -0.32
PDCD4-206ENST00000481353 NBPF14Q5TI25 921 aa13.05□□□□□ -0.32
PDCD4-206ENST00000481353 PHTF2Q8N3S3 785 aa13.05□□□□□ -0.32
PDCD4-206ENST00000481353 STK32AQ8WU08 396 aa13.05□□□□□ -0.32
PDCD4-206ENST00000481353 CYP4X1Q8N118 509 aa13.04□□□□□ -0.32
PDCD4-206ENST00000481353 SLFNL1Q499Z3 407 aa13.03□□□□□ -0.32
PDCD4-206ENST00000481353 CHIC2Q9UKJ5 165 aa13.03□□□□□ -0.32
PDCD4-206ENST00000481353 CCDC27Q2M243 656 aa13.02□□□□□ -0.33
PDCD4-206ENST00000481353 AAASQ9NRG9 546 aa13.02□□□□□ -0.33
PDCD4-206ENST00000481353 MKRN1Q9UHC7 482 aaKnown RBP13.02□□□□□ -0.33
PDCD4-206ENST00000481353 USP17L15C9J2P7 530 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 USP17L10C9JJH3 530 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 USP17L13C9JLJ4 530 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 USP17L12C9JPN9 530 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 USP17L11C9JVI0 530 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 USP17L21D6R901 530 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 USP17L18D6R9N7 530 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 USP17L22D6RA61 530 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 USP17L17D6RBQ6 530 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 USP17L19D6RCP7 530 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 USP17L20D6RJB6 530 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 ATP5J2-PTCD1G3V325 749 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 SIAH2O43255 324 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 WNT7BP56706 349 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 USP17L24Q0WX57 530 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 FOXD4L5Q5VV16 416 aaPredicted RBP13.01□□□□□ -0.33
PDCD4-206ENST00000481353 DEPDC4Q8N2C3 294 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 FOXD4L4Q8WXT5 416 aaPredicted RBP13.01□□□□□ -0.33
PDCD4-206ENST00000481353 MYO15BQ96JP2 1530 aa13.01□□□□□ -0.33
PDCD4-206ENST00000481353 PTK7Q13308 1070 aa13□□□□□ -0.33
PDCD4-206ENST00000481353 NCOA4Q13772 614 aa13□□□□□ -0.33
PDCD4-206ENST00000481353 CRTC2Q53ET0 693 aaPredicted RBP13□□□□□ -0.33
PDCD4-206ENST00000481353 RNF135Q8IUD6 432 aa13□□□□□ -0.33
PDCD4-206ENST00000481353 TTC24A2A3L6 582 aaPredicted RBP12.99□□□□□ -0.33
PDCD4-206ENST00000481353 MAP7D1Q3KQU3 841 aa12.99□□□□□ -0.33
PDCD4-206ENST00000481353 PLPP7Q8NBV4 271 aa12.99□□□□□ -0.33
PDCD4-206ENST00000481353 SNIP1Q8TAD8 396 aaKnown RBP12.99□□□□□ -0.33
PDCD4-206ENST00000481353 PCDHB9Q9Y5E1 797 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms