RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 PTPRKQ15262 1439 aa9.09□□□□□ -0.95
PKP4-211ENST00000481115 YEATS2Q9ULM3 1422 aa9.09□□□□□ -0.95
PKP4-211ENST00000481115 SOCS7O14512 581 aa9.09□□□□□ -0.95
PKP4-211ENST00000481115 HSP90B1P14625 803 aaKnown RBP9.09□□□□□ -0.95
PKP4-211ENST00000481115 PPP2R2DQ66LE6 453 aa9.09□□□□□ -0.95
PKP4-211ENST00000481115 MTMR14Q8NCE2 650 aa9.09□□□□□ -0.95
PKP4-211ENST00000481115 SIN3AQ96ST3 1273 aa9.09□□□□□ -0.95
PKP4-211ENST00000481115 GTPBP4Q9BZE4 634 aaKnown RBP9.09□□□□□ -0.95
PKP4-211ENST00000481115 SPAG9O60271 1321 aaKnown RBP9.08□□□□□ -0.96
PKP4-211ENST00000481115 CANXP27824 592 aaKnown RBP9.08□□□□□ -0.96
PKP4-211ENST00000481115 DIXDC1Q155Q3 683 aa9.08□□□□□ -0.96
PKP4-211ENST00000481115 CENPQQ7L2Z9 268 aaPredicted RBP9.08□□□□□ -0.96
PKP4-211ENST00000481115 UPF1Q92900 1129 aaKnown RBP eCLIP9.08□□□□□ -0.96
PKP4-211ENST00000481115 TRIM44Q96DX7 344 aaPredicted RBP9.08□□□□□ -0.96
PKP4-211ENST00000481115 MYH16Q9H6N6 1097 aa9.08□□□□□ -0.96
PKP4-211ENST00000481115 C2orf72A6NCS6 295 aa9.07□□□□□ -0.96
PKP4-211ENST00000481115 POM121CA8CG34 1229 aa9.07□□□□□ -0.96
PKP4-211ENST00000481115 OFD1O75665 1012 aa9.07□□□□□ -0.96
PKP4-211ENST00000481115 TSPY4P0CV99 314 aa9.07□□□□□ -0.96
PKP4-211ENST00000481115 TSPY10P0CW01 314 aa9.07□□□□□ -0.96
PKP4-211ENST00000481115 XRCC6P12956 609 aaKnown RBP eCLIP9.07□□□□□ -0.96
PKP4-211ENST00000481115 ANP32BQ92688 251 aaKnown RBP9.07□□□□□ -0.96
PKP4-211ENST00000481115 SIGLEC1Q9BZZ2 1709 aa9.07□□□□□ -0.96
PKP4-211ENST00000481115 ROCK1Q13464 1354 aa9.07□□□□□ -0.96
PKP4-211ENST00000481115 BCORL1Q5H9F3 1711 aa9.06□□□□□ -0.96
PKP4-211ENST00000481115 A0A0U1RQG5 324 aaPredicted RBP9.06□□□□□ -0.96
PKP4-211ENST00000481115 KIF3CO14782 793 aa9.06□□□□□ -0.96
PKP4-211ENST00000481115 LETM1O95202 739 aaPredicted RBP9.06□□□□□ -0.96
PKP4-211ENST00000481115 ABL2P42684 1182 aa9.06□□□□□ -0.96
PKP4-211ENST00000481115 DMTNQ08495 405 aa9.06□□□□□ -0.96
PKP4-211ENST00000481115 FAM9BQ8IZU0 186 aa9.06□□□□□ -0.96
PKP4-211ENST00000481115 PUS7Q96PZ0 661 aaKnown RBP9.06□□□□□ -0.96
PKP4-211ENST00000481115 NPDC1Q9NQX5 325 aaPredicted RBP9.06□□□□□ -0.96
PKP4-211ENST00000481115 BRD4O60885 1362 aaPredicted RBP9.06□□□□□ -0.96
PKP4-211ENST00000481115 ATP10AO60312 1499 aa9.06□□□□□ -0.96
PKP4-211ENST00000481115 GCC2Q8IWJ2 1684 aa9.05□□□□□ -0.96
PKP4-211ENST00000481115 DYNC1I1O14576 645 aa9.05□□□□□ -0.96
PKP4-211ENST00000481115 HSPA5P11021 654 aaKnown RBP9.05□□□□□ -0.96
PKP4-211ENST00000481115 SND1Q7KZF4 910 aaKnown RBP eCLIP9.05□□□□□ -0.96
PKP4-211ENST00000481115 TBC1D2Q9BYX2 928 aa9.05□□□□□ -0.96
PKP4-211ENST00000481115 AGLP35573 1532 aa9.05□□□□□ -0.96
PKP4-211ENST00000481115 DUOX2Q9NRD8 1548 aa9.05□□□□□ -0.96
PKP4-211ENST00000481115 SPATA31E1Q6ZUB1 1445 aa9.05□□□□□ -0.96
PKP4-211ENST00000481115 A2MP01023 1474 aa9.04□□□□□ -0.96
PKP4-211ENST00000481115 ANKRD30AQ9BXX3 1397 aa9.04□□□□□ -0.96
PKP4-211ENST00000481115 RCAN3Q9UKA8 241 aa9.04□□□□□ -0.96
PKP4-211ENST00000481115 IVNS1ABPQ9Y6Y0 642 aa9.04□□□□□ -0.96
PKP4-211ENST00000481115 EIF2AK4Q9P2K8 1649 aaKnown RBP9.04□□□□□ -0.96
PKP4-211ENST00000481115 KDM2BQ8NHM5 1336 aa9.04□□□□□ -0.96
PKP4-211ENST00000481115 EIF3AQ14152 1382 aaKnown RBP9.03□□□□□ -0.96
PKP4-211ENST00000481115 DHX29Q7Z478 1369 aaKnown RBP9.03□□□□□ -0.96
PKP4-211ENST00000481115 IBTKQ9P2D0 1353 aaPredicted RBP9.03□□□□□ -0.96
PKP4-211ENST00000481115 EVI5O60447 810 aa9.03□□□□□ -0.96
PKP4-211ENST00000481115 MCM5P33992 734 aa9.03□□□□□ -0.96
PKP4-211ENST00000481115 CSPP1Q1MSJ5 1256 aa9.03□□□□□ -0.96
PKP4-211ENST00000481115 SKOR2Q2VWA4 1001 aaPredicted RBP9.03□□□□□ -0.96
PKP4-211ENST00000481115 FBXO31Q5XUX0 539 aaPredicted RBP9.03□□□□□ -0.96
PKP4-211ENST00000481115 DPY19L2Q6NUT2 758 aa9.03□□□□□ -0.96
PKP4-211ENST00000481115 PHF12Q96QT6 1004 aa9.03□□□□□ -0.96
PKP4-211ENST00000481115 ZRANB1Q9UGI0 708 aa9.03□□□□□ -0.96
PKP4-211ENST00000481115 KIF15Q9NS87 1388 aa9.02□□□□□ -0.97
PKP4-211ENST00000481115 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.02□□□□□ -0.97
PKP4-211ENST00000481115 OATP04181 439 aa9.02□□□□□ -0.97
PKP4-211ENST00000481115 CDK11BP21127 795 aaKnown RBP9.02□□□□□ -0.97
PKP4-211ENST00000481115 FXR2P51116 673 aaKnown RBP eCLIP9.02□□□□□ -0.973e-8■■■□□ 17.3
PKP4-211ENST00000481115 SRPK2P78362 688 aaKnown RBP9.02□□□□□ -0.97
PKP4-211ENST00000481115 SLC20A2Q08357 652 aa9.02□□□□□ -0.97
PKP4-211ENST00000481115 NAP1L2Q9ULW6 460 aaPredicted RBP9.02□□□□□ -0.97
PKP4-211ENST00000481115 ERBINQ96RT1 1412 aa9.02□□□□□ -0.97
PKP4-211ENST00000481115 DDX11L8A8MPP1 907 aa9.01□□□□□ -0.97
PKP4-211ENST00000481115 RFX1P22670 979 aa9.01□□□□□ -0.97
PKP4-211ENST00000481115 RGS3P49796 1198 aa9.01□□□□□ -0.97
PKP4-211ENST00000481115 CCDC173Q0VFZ6 552 aa9.01□□□□□ -0.97
PKP4-211ENST00000481115 C8orf34Q49A92 452 aa9.01□□□□□ -0.97
PKP4-211ENST00000481115 PNISRQ8TF01 805 aaKnown RBP9.01□□□□□ -0.97
PKP4-211ENST00000481115 PPP1R9BQ96SB3 815 aa9.01□□□□□ -0.97
PKP4-211ENST00000481115 CDHR5Q9HBB8 845 aa9.01□□□□□ -0.97
PKP4-211ENST00000481115 CHIC2Q9UKJ5 165 aa9.01□□□□□ -0.97
PKP4-211ENST00000481115 TRPC6Q9Y210 931 aa9.01□□□□□ -0.97
PKP4-211ENST00000481115 RNF17Q9BXT8 1623 aaKnown RBP9.01□□□□□ -0.97
PKP4-211ENST00000481115 NAIPQ13075 1403 aa9□□□□□ -0.97
PKP4-211ENST00000481115 TUSC1Q2TAM9 212 aa9□□□□□ -0.97
PKP4-211ENST00000481115 CFAP70Q5T0N1 1121 aa9□□□□□ -0.97
PKP4-211ENST00000481115 HDGFL1Q5TGJ6 251 aa9□□□□□ -0.97
PKP4-211ENST00000481115 KIAA1211Q6ZU35 1233 aa9□□□□□ -0.97
PKP4-211ENST00000481115 METTL3Q86U44 580 aaKnown RBP9□□□□□ -0.97
PKP4-211ENST00000481115 ZSCAN30Q86W11 494 aa9□□□□□ -0.97
PKP4-211ENST00000481115 EXOC6Q8TAG9 804 aa9□□□□□ -0.97
PKP4-211ENST00000481115 TMEM121BQ9BXQ6 578 aaPredicted RBP9□□□□□ -0.97
PKP4-211ENST00000481115 ANTXR1Q9H6X2 564 aa9□□□□□ -0.97
PKP4-211ENST00000481115 POGKQ9P215 609 aa9□□□□□ -0.97
PKP4-211ENST00000481115 LIMD1Q9UGP4 676 aa9□□□□□ -0.97
PKP4-211ENST00000481115 TBC1D2BQ9UPU7 963 aa9□□□□□ -0.97
PKP4-211ENST00000481115 DEPDC5O75140 1603 aa9□□□□□ -0.97
PKP4-211ENST00000481115 ANKRD50Q9ULJ7 1429 aa8.99□□□□□ -0.97
PKP4-211ENST00000481115 MROH1Q8NDA8 1641 aa8.99□□□□□ -0.97
PKP4-211ENST00000481115 ZNF500O60304 480 aaPredicted RBP8.99□□□□□ -0.97
PKP4-211ENST00000481115 GTF2E1P29083 439 aaPredicted RBP8.99□□□□□ -0.97
PKP4-211ENST00000481115 EN1Q05925 392 aaPredicted RBP8.99□□□□□ -0.97
PKP4-211ENST00000481115 RALBP1Q15311 655 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms