RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 TEX35Q5T0J7 233 aa12.47□□□□□ -0.41
PRPF4B-206ENST00000481109 ZBTB12Q9Y330 459 aaPredicted RBP12.47□□□□□ -0.41
PRPF4B-206ENST00000481109 TRIM66O15016 1216 aa12.47□□□□□ -0.41
PRPF4B-206ENST00000481109 MAGEA9P43362 315 aa12.47□□□□□ -0.41
PRPF4B-206ENST00000481109 ANKRD23Q86SG2 305 aa12.47□□□□□ -0.41
PRPF4B-206ENST00000481109 HFM1A2PYH4 1435 aa12.46□□□□□ -0.41
PRPF4B-206ENST00000481109 ANKRD20A12PQ8NF67 263 aa12.46□□□□□ -0.41
PRPF4B-206ENST00000481109 KIAA1524Q8TCG1 905 aa12.46□□□□□ -0.41
PRPF4B-206ENST00000481109 CFAP43Q8NDM7 1665 aa12.46□□□□□ -0.42
PRPF4B-206ENST00000481109 CASKIN1Q8WXD9 1431 aa12.46□□□□□ -0.42
PRPF4B-206ENST00000481109 MTUS2Q5JR59 1369 aa12.45□□□□□ -0.42
PRPF4B-206ENST00000481109 IQUBQ8NA54 791 aa12.45□□□□□ -0.42
PRPF4B-206ENST00000481109 PAIP2Q9BPZ3 127 aaKnown RBP12.45□□□□□ -0.42
PRPF4B-206ENST00000481109 YEATS2Q9ULM3 1422 aa12.45□□□□□ -0.42
PRPF4B-206ENST00000481109 CGNL1Q0VF96 1302 aa12.45□□□□□ -0.42
PRPF4B-206ENST00000481109 PLEKHD1A6NEE1 506 aa12.45□□□□□ -0.42
PRPF4B-206ENST00000481109 ZNF513Q8N8E2 541 aaPredicted RBP12.44□□□□□ -0.42
PRPF4B-206ENST00000481109 LMBRD1Q9NUN5 540 aa12.44□□□□□ -0.42
PRPF4B-206ENST00000481109 IGHDP01880 384 aa12.44□□□□□ -0.42
PRPF4B-206ENST00000481109 NUCB2P80303 420 aa12.44□□□□□ -0.42
PRPF4B-206ENST00000481109 SART3Q15020 963 aaKnown RBP12.44□□□□□ -0.42
PRPF4B-206ENST00000481109 FAM184AQ8NB25 1140 aa12.44□□□□□ -0.42
PRPF4B-206ENST00000481109 H0YHG0 523 aa12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 IPO7O95373 1038 aaKnown RBP12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 RBM6P78332 1123 aaKnown RBP12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 SARNPP82979 210 aaKnown RBP12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 PPP2R5AQ15172 486 aa12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 CCDC96Q2M329 555 aa12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 RRP15Q9Y3B9 282 aaKnown RBP12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 FYCO1Q9BQS8 1478 aa12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 PTPRKQ15262 1439 aa12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 PTPN23Q9H3S7 1636 aa12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 TNNT1P13805 278 aa12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 GPS2Q13227 327 aa12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 BMS1Q14692 1282 aaKnown RBP12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 KRBA2Q6ZNG9 492 aa12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 PACS2Q86VP3 889 aa12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 V9GYY5 206 aaPredicted RBP12.43□□□□□ -0.42
PRPF4B-206ENST00000481109 URB2Q14146 1524 aaKnown RBP12.42□□□□□ -0.42
PRPF4B-206ENST00000481109 COQ9O75208 318 aa12.42□□□□□ -0.42
PRPF4B-206ENST00000481109 KMT5BQ4FZB7 885 aa12.42□□□□□ -0.42
PRPF4B-206ENST00000481109 CCDC191Q8NCU4 936 aa12.42□□□□□ -0.42
PRPF4B-206ENST00000481109 CPP00450 1065 aa12.42□□□□□ -0.42
PRPF4B-206ENST00000481109 ZSCAN26Q16670 478 aa12.42□□□□□ -0.42
PRPF4B-206ENST00000481109 GOLGA5Q8TBA6 731 aa12.42□□□□□ -0.42
PRPF4B-206ENST00000481109 LCMT1Q9UIC8 334 aa12.42□□□□□ -0.42
PRPF4B-206ENST00000481109 NEFHP12036 1026 aa12.41□□□□□ -0.42
PRPF4B-206ENST00000481109 IRX1P78414 480 aaPredicted RBP12.41□□□□□ -0.42
PRPF4B-206ENST00000481109 SETDB1Q15047 1291 aa12.41□□□□□ -0.42
PRPF4B-206ENST00000481109 RNF20Q5VTR2 975 aa12.41□□□□□ -0.42
PRPF4B-206ENST00000481109 MMS22LQ6ZRQ5 1243 aa12.41□□□□□ -0.42
PRPF4B-206ENST00000481109 FBXO18Q8NFZ0 1043 aa12.41□□□□□ -0.42
PRPF4B-206ENST00000481109 PPM1EQ8WY54 764 aa12.41□□□□□ -0.42
PRPF4B-206ENST00000481109 MKL1Q969V6 931 aa12.41□□□□□ -0.42
PRPF4B-206ENST00000481109 SSFA2P28290 1259 aa12.41□□□□□ -0.42
PRPF4B-206ENST00000481109 TPM4P67936 248 aa12.41□□□□□ -0.42
PRPF4B-206ENST00000481109 NUCKS1Q9H1E3 243 aaKnown RBP12.41□□□□□ -0.42
PRPF4B-206ENST00000481109 FGD6Q6ZV73 1430 aa12.4□□□□□ -0.42
PRPF4B-206ENST00000481109 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
PRPF4B-206ENST00000481109 NLRP13Q86W25 1043 aa12.4□□□□□ -0.42
PRPF4B-206ENST00000481109 FAM212AQ96EL1 285 aa12.4□□□□□ -0.42
PRPF4B-206ENST00000481109 THOC2Q8NI27 1593 aaKnown RBP12.4□□□□□ -0.42
PRPF4B-206ENST00000481109 C21orf2O43822 256 aa12.4□□□□□ -0.43
PRPF4B-206ENST00000481109 ERCC3P19447 782 aa12.4□□□□□ -0.43
PRPF4B-206ENST00000481109 EFCAB5A4FU69 1503 aa12.39□□□□□ -0.43
PRPF4B-206ENST00000481109 INHBEP58166 350 aa12.39□□□□□ -0.43
PRPF4B-206ENST00000481109 SNAPC4Q5SXM2 1469 aa12.39□□□□□ -0.43
PRPF4B-206ENST00000481109 KIF21AQ7Z4S6 1674 aa12.39□□□□□ -0.43
PRPF4B-206ENST00000481109 HECW1Q76N89 1606 aa12.39□□□□□ -0.43
PRPF4B-206ENST00000481109 AQRO60306 1485 aaKnown RBP eCLIP12.39□□□□□ -0.432e-7■■■■■ 88.8
PRPF4B-206ENST00000481109 IPO8O15397 1037 aaKnown RBP12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 JAKMIP3Q5VZ66 844 aa12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 PMFBP1Q8TBY8 1022 aa12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 GPT2Q8TD30 523 aa12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 TEX13AQ9BXU3 409 aaPredicted RBP12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 TSPY26PQ9H489 355 aa12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 TTC12Q9H892 705 aaPredicted RBP12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 PSD3Q9NYI0 1048 aa12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 LRRFIP2Q9Y608 721 aaKnown RBP12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 RPS6KL1Q9Y6S9 549 aa12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 FMN1Q68DA7 1419 aa12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 PTPRCP08575 1304 aa12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 NRDCO43847 1150 aa12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 MBD3O95983 291 aa12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 SHROOM2Q13796 1616 aa12.38□□□□□ -0.43
PRPF4B-206ENST00000481109 TSHZ1Q6ZSZ6 1077 aa12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 C17orf53Q8N3J3 647 aaPredicted RBP12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 ERCC4Q92889 916 aaPredicted RBP12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 NAIPQ13075 1403 aa12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 ANKRD36BQ8N2N9 1353 aa12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 CUL7Q14999 1698 aa12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 HTATSF1O43719 755 aaKnown RBP12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 CYP2E1P05181 493 aaPredicted RBP12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 PDE3AQ14432 1141 aa12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 CCDC112Q8NEF3 446 aa12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 NEK11Q8NG66 645 aa12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 ZNF526Q8TF50 670 aaPredicted RBP12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 CLUAP1Q96AJ1 413 aa12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 ANKRD30AQ9BXX3 1397 aa12.37□□□□□ -0.43
PRPF4B-206ENST00000481109 ARID3CA6NKF2 412 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms