RNA–Protein interactions for RNA: ENST00000481047.1

MDK-208, Transcript of midkine, human

TSL 2

Gene MDK, Length 775 nt, Biotype retained intron, Subcellular localisation Exosome, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDK-208	ENST00000481047	CRB1	P82279	1406 aa		32.32	■■■□□ 2.76
MDK-208	ENST00000481047	THRAP3	Q9Y2W1	955 aa	Known RBP	32.31	■■■□□ 2.76
MDK-208	ENST00000481047	ZRANB1	Q9UGI0	708 aa		32.29	■■■□□ 2.76
MDK-208	ENST00000481047	COL18A1	P39060	1754 aa		32.29	■■■□□ 2.76
MDK-208	ENST00000481047	ANKRD36B	Q8N2N9	1353 aa		32.28	■■■□□ 2.76
MDK-208	ENST00000481047	ABCC6	O95255	1503 aa		32.27	■■■□□ 2.76
MDK-208	ENST00000481047	TOM1L2	Q6ZVM7	507 aa		32.26	■■■□□ 2.75
MDK-208	ENST00000481047	WDR17	Q8IZU2	1322 aa		32.25	■■■□□ 2.75
MDK-208	ENST00000481047	AXIN2	Q9Y2T1	843 aa		32.24	■■■□□ 2.75
MDK-208	ENST00000481047	CSB-PGBD3	P0DP91	1061 aa		32.23	■■■□□ 2.75
MDK-208	ENST00000481047	PDE3B	Q13370	1112 aa		32.23	■■■□□ 2.75
MDK-208	ENST00000481047	OVOS2	A0A0J9YW53	1432 aa		32.23	■■■□□ 2.75
MDK-208	ENST00000481047	OVOS2	Q6IE36	1432 aa		32.23	■■■□□ 2.75
MDK-208	ENST00000481047	FAM182B	Q5T319	152 aa		32.21	■■■□□ 2.75
MDK-208	ENST00000481047	COG3	Q96JB2	828 aa		32.19	■■■□□ 2.74
MDK-208	ENST00000481047	RGPD1	P0DJD0	1748 aa		32.18	■■■□□ 2.74
MDK-208	ENST00000481047	FAM196A	Q6ZSG2	479 aa		32.18	■■■□□ 2.74
MDK-208	ENST00000481047	PARP4	Q9UKK3	1724 aa	Known RBP	32.17	■■■□□ 2.74
MDK-208	ENST00000481047	RGPD5	Q99666	1765 aa		32.17	■■■□□ 2.74
MDK-208	ENST00000481047	BAG6	P46379	1132 aa		32.17	■■■□□ 2.74
MDK-208	ENST00000481047	LTN1	O94822	1766 aa		32.17	■■■□□ 2.74
MDK-208	ENST00000481047	DEFB132	Q7Z7B7	95 aa		32.16	■■■□□ 2.74
MDK-208	ENST00000481047	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.14	■■■□□ 2.74
MDK-208	ENST00000481047	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.13	■■■□□ 2.73
MDK-208	ENST00000481047	CARD10	Q9BWT7	1032 aa		32.13	■■■□□ 2.73
MDK-208	ENST00000481047	CCDC7	Q96M83	1385 aa		32.11	■■■□□ 2.73
MDK-208	ENST00000481047	WNK3	Q9BYP7	1800 aa		32.11	■■■□□ 2.73
MDK-208	ENST00000481047	MYOM1	P52179	1685 aa		32.11	■■■□□ 2.73
MDK-208	ENST00000481047	LRRC37A3	O60309	1634 aa		32.1	■■■□□ 2.73
MDK-208	ENST00000481047	ERBB3	P21860	1342 aa		32.09	■■■□□ 2.73
MDK-208	ENST00000481047	DDB1	Q16531	1140 aa		32.09	■■■□□ 2.73
MDK-208	ENST00000481047	C11orf95	C9JLR9	678 aa	Predicted RBP	32.07	■■■□□ 2.72
MDK-208	ENST00000481047	TNS1	Q9HBL0	1735 aa	Known RBP	32.06	■■■□□ 2.72
MDK-208	ENST00000481047	TRIM37	O94972	964 aa		32.06	■■■□□ 2.72
MDK-208	ENST00000481047	HSPA5	P11021	654 aa	Known RBP	32.06	■■■□□ 2.72
MDK-208	ENST00000481047	POLR3GL	Q9BT43	218 aa		32.06	■■■□□ 2.72
MDK-208	ENST00000481047	ANKRD24	Q8TF21	1146 aa		32.05	■■■□□ 2.72
MDK-208	ENST00000481047	NLRP2	Q9NX02	1062 aa		32.05	■■■□□ 2.72
MDK-208	ENST00000481047	OVOS2	A0A0G2JMS6	1433 aa		32.05	■■■□□ 2.72
MDK-208	ENST00000481047	KIF20B	Q96Q89	1820 aa		32.05	■■■□□ 2.72
MDK-208	ENST00000481047	DISP2	A7MBM2	1401 aa		32.04	■■■□□ 2.72
MDK-208	ENST00000481047	GGNBP2	Q9H3C7	697 aa		32.04	■■■□□ 2.72
MDK-208	ENST00000481047	FYB1	O15117	783 aa		32.03	■■■□□ 2.72
MDK-208	ENST00000481047	IP6K1	Q92551	441 aa		32.03	■■■□□ 2.72
MDK-208	ENST00000481047	NSD3	Q9BZ95	1437 aa		32.02	■■■□□ 2.72
MDK-208	ENST00000481047	AMPH	P49418	695 aa		32.01	■■■□□ 2.71
MDK-208	ENST00000481047	MAP3K19	Q56UN5	1328 aa		32	■■■□□ 2.71
MDK-208	ENST00000481047	EN1	Q05925	392 aa	Predicted RBP	32	■■■□□ 2.71
MDK-208	ENST00000481047	RTL1	A6NKG5	1358 aa		31.98	■■■□□ 2.71
MDK-208	ENST00000481047	FAM208A	Q9UK61	1670 aa	Known RBP	31.98	■■■□□ 2.71
MDK-208	ENST00000481047	APBA3	O96018	575 aa		31.97	■■■□□ 2.71
MDK-208	ENST00000481047	EXOC5	O00471	708 aa		31.96	■■■□□ 2.71
MDK-208	ENST00000481047	HOXC9	P31274	260 aa		31.96	■■■□□ 2.71
MDK-208	ENST00000481047	CARD14	Q9BXL6	1004 aa		31.96	■■■□□ 2.71
MDK-208	ENST00000481047	PEAK1	Q9H792	1746 aa		31.95	■■■□□ 2.71
MDK-208	ENST00000481047	TNS2	Q63HR2	1409 aa		31.95	■■■□□ 2.71
MDK-208	ENST00000481047	LTV1	Q96GA3	475 aa	Predicted RBP	31.95	■■■□□ 2.71
MDK-208	ENST00000481047	PARD3	Q8TEW0	1356 aa		31.94	■■■□□ 2.7
MDK-208	ENST00000481047	IL2RB	P14784	551 aa		31.93	■■■□□ 2.7
MDK-208	ENST00000481047	FBLN1	P23142	703 aa		31.93	■■■□□ 2.7
MDK-208	ENST00000481047	RRS1	Q15050	365 aa	Known RBP	31.93	■■■□□ 2.7
MDK-208	ENST00000481047	CGNL1	Q0VF96	1302 aa		31.93	■■■□□ 2.7
MDK-208	ENST00000481047	MARCH10	Q8NA82	808 aa	Predicted RBP	31.91	■■■□□ 2.7
MDK-208	ENST00000481047	EZH2	Q15910	746 aa	Known RBP	31.9	■■■□□ 2.7
MDK-208	ENST00000481047	SMG6	Q86US8	1419 aa	Known RBP	31.9	■■■□□ 2.7
MDK-208	ENST00000481047	BCL9	O00512	1426 aa		31.89	■■■□□ 2.7
MDK-208	ENST00000481047	CAMKK2	Q96RR4	588 aa		31.88	■■■□□ 2.69
MDK-208	ENST00000481047	KIF24	Q5T7B8	1368 aa		31.86	■■■□□ 2.69
MDK-208	ENST00000481047	FLT4	P35916	1363 aa		31.85	■■■□□ 2.69
MDK-208	ENST00000481047	SBF2	Q86WG5	1849 aa		31.84	■■■□□ 2.69
MDK-208	ENST00000481047	BCL11B	Q9C0K0	894 aa	Predicted RBP	31.83	■■■□□ 2.69
MDK-208	ENST00000481047	RREB1	Q92766	1687 aa		31.81	■■■□□ 2.68
MDK-208	ENST00000481047	INSR	P06213	1382 aa		31.81	■■■□□ 2.68
MDK-208	ENST00000481047	PSD	A5PKW4	1024 aa	Predicted RBP	31.79	■■■□□ 2.68
MDK-208	ENST00000481047	PANK3	Q9H999	370 aa		31.79	■■■□□ 2.68
MDK-208	ENST00000481047	RGPD3	A6NKT7	1758 aa	Predicted RBP	31.77	■■■□□ 2.68
MDK-208	ENST00000481047	RGPD4	Q7Z3J3	1758 aa		31.77	■■■□□ 2.68
MDK-208	ENST00000481047	ANKRD26	Q9UPS8	1709 aa		31.77	■■■□□ 2.68
MDK-208	ENST00000481047	HSP90AB2P	Q58FF8	381 aa		31.76	■■■□□ 2.67
MDK-208	ENST00000481047	EMILIN1	Q9Y6C2	1016 aa		31.76	■■■□□ 2.67
MDK-208	ENST00000481047	RGPD2	P0DJD1	1756 aa		31.75	■■■□□ 2.67
MDK-208	ENST00000481047	NUP188	Q5SRE5	1749 aa		31.75	■■■□□ 2.67
MDK-208	ENST00000481047	NSD2	O96028	1365 aa		31.74	■■■□□ 2.67
MDK-208	ENST00000481047	PLSCR1	O15162	318 aa		31.74	■■■□□ 2.67
MDK-208	ENST00000481047	PPM1G	O15355	546 aa	Predicted RBP	31.74	■■■□□ 2.67
MDK-208	ENST00000481047	R3HDM1	Q15032	1099 aa	Known RBP	31.74	■■■□□ 2.67
MDK-208	ENST00000481047	NBPF14	Q5TI25	921 aa		31.74	■■■□□ 2.67
MDK-208	ENST00000481047	NBPF6	Q5VWK0	638 aa		31.73	■■■□□ 2.67
MDK-208	ENST00000481047	NBPF4	Q96M43	638 aa		31.73	■■■□□ 2.67
MDK-208	ENST00000481047	NHS	Q6T4R5	1651 aa		31.73	■■■□□ 2.67
MDK-208	ENST00000481047	PTF1A	Q7RTS3	328 aa		31.71	■■■□□ 2.67
MDK-208	ENST00000481047	DDX54	Q8TDD1	881 aa	Known RBP	31.71	■■■□□ 2.67
MDK-208	ENST00000481047	RAPGEF4	Q8WZA2	1011 aa		31.71	■■■□□ 2.67
MDK-208	ENST00000481047	MEGF6	O75095	1541 aa		31.7	■■■□□ 2.67
MDK-208	ENST00000481047	USHBP1	Q8N6Y0	703 aa		31.7	■■■□□ 2.67
MDK-208	ENST00000481047	ACSBG1	Q96GR2	724 aa		31.7	■■■□□ 2.67
MDK-208	ENST00000481047	KIF7	Q2M1P5	1343 aa		31.7	■■■□□ 2.66
MDK-208	ENST00000481047	TNNT2	P45379	298 aa	Predicted RBP	31.68	■■■□□ 2.66
MDK-208	ENST00000481047	ZCRB1	Q8TBF4	217 aa	Known RBP	31.68	■■■□□ 2.66
MDK-208	ENST00000481047	KNSTRN	Q9Y448	316 aa		31.68	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms