RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 VASH1Q7L8A9 365 aaPredicted RBP7.49□□□□□ -1.21
FN1-221ENST00000480737 PTK2Q05397 1052 aa7.48□□□□□ -1.21
FN1-221ENST00000480737 CCDC116Q8IYX3 515 aa7.48□□□□□ -1.21
FN1-221ENST00000480737 CARD14Q9BXL6 1004 aa7.48□□□□□ -1.21
FN1-221ENST00000480737 EMILIN1Q9Y6C2 1016 aa7.48□□□□□ -1.21
FN1-221ENST00000480737 PNMA1Q8ND90 353 aa7.47□□□□□ -1.21
FN1-221ENST00000480737 SLC10A4Q96EP9 437 aa7.47□□□□□ -1.21
FN1-221ENST00000480737 GJD4Q96KN9 370 aaPredicted RBP7.47□□□□□ -1.21
FN1-221ENST00000480737 SCARF1Q14162 830 aa7.46□□□□□ -1.22
FN1-221ENST00000480737 Q6ZVU0 165 aa7.46□□□□□ -1.22
FN1-221ENST00000480737 LINC00528Q8N1L1 170 aa7.46□□□□□ -1.22
FN1-221ENST00000480737 IL27Q8NEV9 243 aa7.46□□□□□ -1.22
FN1-221ENST00000480737 ADAM32Q8TC27 787 aa7.46□□□□□ -1.22
FN1-221ENST00000480737 PURBQ96QR8 312 aaKnown RBP7.46□□□□□ -1.22
FN1-221ENST00000480737 NXF1Q9UBU9 619 aaKnown RBP7.46□□□□□ -1.22
FN1-221ENST00000480737 TPRNQ4KMQ1 711 aa7.45□□□□□ -1.22
FN1-221ENST00000480737 BANK1Q8NDB2 785 aa7.45□□□□□ -1.22
FN1-221ENST00000480737 KCTD15Q96SI1 283 aaPredicted RBP7.45□□□□□ -1.22
FN1-221ENST00000480737 ESPNB1AK53 854 aa7.44□□□□□ -1.22
FN1-221ENST00000480737 GPR37L1O60883 481 aa7.44□□□□□ -1.22
FN1-221ENST00000480737 INTS6LQ5JSJ4 861 aaKnown RBP7.44□□□□□ -1.22
FN1-221ENST00000480737 PPP1R26Q5T8A7 1209 aaPredicted RBP7.44□□□□□ -1.22
FN1-221ENST00000480737 ZBTB33Q86T24 672 aa7.44□□□□□ -1.22
FN1-221ENST00000480737 H3BM21 787 aa7.43□□□□□ -1.22
FN1-221ENST00000480737 DHX9Q08211 1270 aaKnown RBP7.43□□□□□ -1.22
FN1-221ENST00000480737 NBPF20Q3BBV1 942 aa7.43□□□□□ -1.22
FN1-221ENST00000480737 TSEN34Q9BSV6 310 aaKnown RBP7.42□□□□□ -1.22
FN1-221ENST00000480737 PGPEP1Q9NXJ5 209 aa7.42□□□□□ -1.22
FN1-221ENST00000480737 ATP1B4Q9UN42 357 aaPredicted RBP7.42□□□□□ -1.22
FN1-221ENST00000480737 SOS2Q07890 1332 aaPredicted RBP7.42□□□□□ -1.22
FN1-221ENST00000480737 VSIG8P0DPA2 414 aa7.41□□□□□ -1.22
FN1-221ENST00000480737 SEPT12Q8IYM1 358 aa7.4□□□□□ -1.22
FN1-221ENST00000480737 MTMR14Q8NCE2 650 aa7.4□□□□□ -1.22
FN1-221ENST00000480737 ZBBXA8MT70 800 aa7.39□□□□□ -1.23
FN1-221ENST00000480737 SPINT1O43278 529 aa7.39□□□□□ -1.23
FN1-221ENST00000480737 UPP2O95045 317 aa7.39□□□□□ -1.23
FN1-221ENST00000480737 SLC16A10Q8TF71 515 aa7.39□□□□□ -1.23
FN1-221ENST00000480737 FBXO45P0C2W1 286 aa7.38□□□□□ -1.23
FN1-221ENST00000480737 BMP2P12643 396 aa7.38□□□□□ -1.23
FN1-221ENST00000480737 CBLBQ13191 982 aa7.38□□□□□ -1.23
FN1-221ENST00000480737 C6orf118Q5T5N4 469 aa7.38□□□□□ -1.23
FN1-221ENST00000480737 DNMT3LQ9UJW3 386 aa7.38□□□□□ -1.23
FN1-221ENST00000480737 SOBPA7XYQ1 873 aa7.37□□□□□ -1.23
FN1-221ENST00000480737 LILRA1O75019 489 aa7.37□□□□□ -1.23
FN1-221ENST00000480737 IRF7Q92985 503 aa7.37□□□□□ -1.23
FN1-221ENST00000480737 ERBB4Q15303 1308 aa7.36□□□□□ -1.23
FN1-221ENST00000480737 INSM1Q01101 510 aaPredicted RBP7.36□□□□□ -1.23
FN1-221ENST00000480737 DZIP3Q86Y13 1208 aaKnown RBP7.36□□□□□ -1.23
FN1-221ENST00000480737 CCDC125Q86Z20 511 aa7.36□□□□□ -1.23
FN1-221ENST00000480737 ERVH48-1M5A8F1 160 aa7.35□□□□□ -1.23
FN1-221ENST00000480737 MAN1A2O60476 641 aa7.35□□□□□ -1.23
FN1-221ENST00000480737 LORP23490 312 aaPredicted RBP7.35□□□□□ -1.23
FN1-221ENST00000480737 MCCD1P59942 119 aaPredicted RBP7.35□□□□□ -1.23
FN1-221ENST00000480737 KDF1Q8NAX2 398 aaPredicted RBP7.35□□□□□ -1.23
FN1-221ENST00000480737 ZNF784Q8NCA9 323 aaPredicted RBP7.35□□□□□ -1.23
FN1-221ENST00000480737 NDUFB9Q9Y6M9 179 aa7.35□□□□□ -1.23
FN1-221ENST00000480737 TTLL8A6PVC2 850 aa7.34□□□□□ -1.23
FN1-221ENST00000480737 ADH1AP07327 375 aa7.34□□□□□ -1.23
FN1-221ENST00000480737 GMPRP36959 345 aa7.34□□□□□ -1.23
FN1-221ENST00000480737 NR1H3Q13133 447 aa7.34□□□□□ -1.23
FN1-221ENST00000480737 TMPRSS4Q9NRS4 437 aa7.34□□□□□ -1.23
FN1-221ENST00000480737 STK17AQ9UEE5 414 aa7.34□□□□□ -1.23
FN1-221ENST00000480737 APBB1O00213 710 aa7.33□□□□□ -1.24
FN1-221ENST00000480737 VEGFBP49765 207 aa7.33□□□□□ -1.24
FN1-221ENST00000480737 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.33□□□□□ -1.249e-39■□□□□ 10.7
FN1-221ENST00000480737 SNRKQ9NRH2 765 aa7.33□□□□□ -1.24
FN1-221ENST00000480737 PPFIA3O75145 1194 aa7.32□□□□□ -1.24
FN1-221ENST00000480737 ADD1P35611 737 aaKnown RBP7.32□□□□□ -1.24
FN1-221ENST00000480737 ZNF592Q92610 1267 aa7.32□□□□□ -1.24
FN1-221ENST00000480737 TRIM52Q96A61 297 aa7.31□□□□□ -1.24
FN1-221ENST00000480737 ERVK-9P63128 1117 aa7.3□□□□□ -1.24
FN1-221ENST00000480737 RNF217Q8TC41 542 aa7.3□□□□□ -1.24
FN1-221ENST00000480737 AGBL1Q96MI9 1066 aa7.3□□□□□ -1.24
FN1-221ENST00000480737 PCDHB9Q9Y5E1 797 aa7.3□□□□□ -1.24
FN1-221ENST00000480737 SLC35F4A4IF30 521 aa7.29□□□□□ -1.24
FN1-221ENST00000480737 GIGYF1O75420 1035 aaPredicted RBP7.29□□□□□ -1.24
FN1-221ENST00000480737 PTGIRP43119 386 aa7.29□□□□□ -1.24
FN1-221ENST00000480737 CTSOP43234 321 aaPredicted RBP7.29□□□□□ -1.24
FN1-221ENST00000480737 PTSQ03393 145 aa7.29□□□□□ -1.24
FN1-221ENST00000480737 FOXD4L5Q5VV16 416 aaPredicted RBP7.29□□□□□ -1.24
FN1-221ENST00000480737 NANOS1Q8WY41 292 aaKnown RBP7.29□□□□□ -1.24
FN1-221ENST00000480737 RELBQ01201 579 aa7.28□□□□□ -1.24
FN1-221ENST00000480737 RNF20Q5VTR2 975 aa7.28□□□□□ -1.24
FN1-221ENST00000480737 INSM2Q96T92 566 aaPredicted RBP7.28□□□□□ -1.24
FN1-221ENST00000480737 ZNF330Q9Y3S2 320 aaPredicted RBP7.28□□□□□ -1.24
FN1-221ENST00000480737 SENP3-EIF4A1A0A087X0R7 540 aa7.26□□□□□ -1.25
FN1-221ENST00000480737 RAB15P59190 212 aa7.26□□□□□ -1.25
FN1-221ENST00000480737 CYLDQ9NQC7 956 aa7.26□□□□□ -1.25
FN1-221ENST00000480737 TRAK2O60296 914 aa7.25□□□□□ -1.25
FN1-221ENST00000480737 GPC1P35052 558 aa7.25□□□□□ -1.25
FN1-221ENST00000480737 RNF144AP50876 292 aaPredicted RBP7.25□□□□□ -1.25
FN1-221ENST00000480737 IRF5Q13568 498 aa7.25□□□□□ -1.25
FN1-221ENST00000480737 CC2D2BQ6DHV5 1058 aa7.25□□□□□ -1.25
FN1-221ENST00000480737 CCDC155Q8N6L0 562 aa7.25□□□□□ -1.25
FN1-221ENST00000480737 ZNF395Q9H8N7 513 aaPredicted RBP7.25□□□□□ -1.25
FN1-221ENST00000480737 TBC1D2BQ9UPU7 963 aa7.25□□□□□ -1.25
FN1-221ENST00000480737 FIGNL2A6NMB9 653 aa7.24□□□□□ -1.25
FN1-221ENST00000480737 ZSCAN1Q8NBB4 408 aa7.24□□□□□ -1.25
FN1-221ENST00000480737 POLMQ9NP87 494 aaPredicted RBP7.24□□□□□ -1.25
FN1-221ENST00000480737 ATP5J2-PTCD1G3V325 749 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms