RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 CDCA8Q53HL2 280 aa21.45■■□□□ 1.02
CDK9-203ENST00000480353 NME9Q86XW9 330 aa21.45■■□□□ 1.02
CDK9-203ENST00000480353 A0A1W2PP64 1363 aa21.45■■□□□ 1.02
CDK9-203ENST00000480353 CD163L1Q9NR16 1453 aa21.45■■□□□ 1.02
CDK9-203ENST00000480353 RGPD1P0DJD0 1748 aa21.44■■□□□ 1.02
CDK9-203ENST00000480353 RGPD5Q99666 1765 aa21.44■■□□□ 1.02
CDK9-203ENST00000480353 DEFB132Q7Z7B7 95 aa21.43■■□□□ 1.02
CDK9-203ENST00000480353 ARHGEF25Q86VW2 580 aa21.43■■□□□ 1.02
CDK9-203ENST00000480353 FAM196AQ6ZSG2 479 aa21.42■■□□□ 1.02
CDK9-203ENST00000480353 COL18A1P39060 1754 aa21.41■■□□□ 1.02
CDK9-203ENST00000480353 USP31Q70CQ4 1352 aa21.41■■□□□ 1.02
CDK9-203ENST00000480353 LTN1O94822 1766 aa21.41■■□□□ 1.02
CDK9-203ENST00000480353 WDR17Q8IZU2 1322 aa21.4■■□□□ 1.02
CDK9-203ENST00000480353 USP54Q70EL1 1684 aa21.4■■□□□ 1.02
CDK9-203ENST00000480353 NFAT5O94916 1531 aa21.39■■□□□ 1.02
CDK9-203ENST00000480353 AXIN2Q9Y2T1 843 aa21.39■■□□□ 1.01
CDK9-203ENST00000480353 COG3Q96JB2 828 aa21.38■■□□□ 1.01
CDK9-203ENST00000480353 PARP4Q9UKK3 1724 aaKnown RBP21.38■■□□□ 1.01
CDK9-203ENST00000480353 ANKRD36BQ8N2N9 1353 aa21.36■■□□□ 1.01
CDK9-203ENST00000480353 ABCC6O95255 1503 aa21.36■■□□□ 1.01
CDK9-203ENST00000480353 DDB1Q16531 1140 aa21.36■■□□□ 1.01
CDK9-203ENST00000480353 TRIM37O94972 964 aa21.35■■□□□ 1.01
CDK9-203ENST00000480353 CDCA7Q9BWT1 371 aaPredicted RBP21.35■■□□□ 1.01
CDK9-203ENST00000480353 WNK3Q9BYP7 1800 aa21.34■■□□□ 1.01
CDK9-203ENST00000480353 C11orf95C9JLR9 678 aaPredicted RBP21.34■■□□□ 1.01
CDK9-203ENST00000480353 EN1Q05925 392 aaPredicted RBP21.33■■□□□ 1.01
CDK9-203ENST00000480353 POLR3GLQ9BT43 218 aa21.33■■□□□ 1.01
CDK9-203ENST00000480353 CARD10Q9BWT7 1032 aa21.33■■□□□ 1.01
CDK9-203ENST00000480353 TNS1Q9HBL0 1735 aaKnown RBP21.32■■□□□ 1
CDK9-203ENST00000480353 NLRP2Q9NX02 1062 aa21.32■■□□□ 1
CDK9-203ENST00000480353 CCDC7Q96M83 1385 aa21.32■■□□□ 1
CDK9-203ENST00000480353 OVOS2A0A0J9YW53 1432 aa21.31■■□□□ 1
CDK9-203ENST00000480353 OVOS2Q6IE36 1432 aa21.31■■□□□ 1
CDK9-203ENST00000480353 APBA3O96018 575 aa21.31■■□□□ 1
CDK9-203ENST00000480353 LRRC37A3O60309 1634 aa21.3■■□□□ 1
CDK9-203ENST00000480353 OVOS2A0A0G2JMS6 1433 aa21.29■■□□□ 1
CDK9-203ENST00000480353 AMPHP49418 695 aa21.29■■□□□ 1
CDK9-203ENST00000480353 EIF4G2P78344 907 aaKnown RBP eCLIP21.29■■□□□ 1
CDK9-203ENST00000480353 ANKRD24Q8TF21 1146 aa21.29■■□□□ 1
CDK9-203ENST00000480353 KIF20BQ96Q89 1820 aa21.29■■□□□ 1
CDK9-203ENST00000480353 EXOC5O00471 708 aa21.28■■□□□ 1
CDK9-203ENST00000480353 ERBB3P21860 1342 aa21.28■■□□□ 1
CDK9-203ENST00000480353 LTV1Q96GA3 475 aaPredicted RBP21.27■■□□□ 1
CDK9-203ENST00000480353 GGNBP2Q9H3C7 697 aa21.26■□□□□ 0.99
CDK9-203ENST00000480353 DISP2A7MBM2 1401 aa21.25■□□□□ 0.99
CDK9-203ENST00000480353 EZH2Q15910 746 aaKnown RBP21.25■□□□□ 0.99
CDK9-203ENST00000480353 IP6K1Q92551 441 aa21.25■□□□□ 0.99
CDK9-203ENST00000480353 FAM208AQ9UK61 1670 aaKnown RBP21.24■□□□□ 0.99
CDK9-203ENST00000480353 FYB1O15117 783 aa21.23■□□□□ 0.99
CDK9-203ENST00000480353 MYOM1P52179 1685 aa21.23■□□□□ 0.99
CDK9-203ENST00000480353 PARD3Q8TEW0 1356 aa21.23■□□□□ 0.99
CDK9-203ENST00000480353 IL2RBP14784 551 aa21.22■□□□□ 0.99
CDK9-203ENST00000480353 MAP3K19Q56UN5 1328 aa21.22■□□□□ 0.99
CDK9-203ENST00000480353 SBF2Q86WG5 1849 aa21.22■□□□□ 0.99
CDK9-203ENST00000480353 NSD3Q9BZ95 1437 aa21.21■□□□□ 0.99
CDK9-203ENST00000480353 PSDA5PKW4 1024 aaPredicted RBP21.21■□□□□ 0.99
CDK9-203ENST00000480353 HSPA5P11021 654 aaKnown RBP21.21■□□□□ 0.99
CDK9-203ENST00000480353 HOXC9P31274 260 aa21.2■□□□□ 0.98
CDK9-203ENST00000480353 MARCH10Q8NA82 808 aaPredicted RBP21.2■□□□□ 0.98
CDK9-203ENST00000480353 CAMKK2Q96RR4 588 aa21.2■□□□□ 0.98
CDK9-203ENST00000480353 PEAK1Q9H792 1746 aa21.2■□□□□ 0.98
CDK9-203ENST00000480353 KAT6BQ8WYB5 2073 aa21.19■□□□□ 0.98
CDK9-203ENST00000480353 FBLN1P23142 703 aa21.19■□□□□ 0.98
CDK9-203ENST00000480353 RRS1Q15050 365 aaKnown RBP21.19■□□□□ 0.98
CDK9-203ENST00000480353 TNS2Q63HR2 1409 aa21.19■□□□□ 0.98
CDK9-203ENST00000480353 SMG6Q86US8 1419 aaKnown RBP21.19■□□□□ 0.98
CDK9-203ENST00000480353 NBPF14Q5TI25 921 aa21.18■□□□□ 0.98
CDK9-203ENST00000480353 RTL1A6NKG5 1358 aa21.18■□□□□ 0.98
CDK9-203ENST00000480353 CGNL1Q0VF96 1302 aa21.16■□□□□ 0.98
CDK9-203ENST00000480353 R3HDM1Q15032 1099 aaKnown RBP21.16■□□□□ 0.98
CDK9-203ENST00000480353 BCL11BQ9C0K0 894 aaPredicted RBP21.16■□□□□ 0.98
CDK9-203ENST00000480353 CARD14Q9BXL6 1004 aa21.15■□□□□ 0.98
CDK9-203ENST00000480353 RREB1Q92766 1687 aa21.15■□□□□ 0.98
CDK9-203ENST00000480353 RGPD2P0DJD1 1756 aa21.13■□□□□ 0.97
CDK9-203ENST00000480353 NUP188Q5SRE5 1749 aa21.12■□□□□ 0.97
CDK9-203ENST00000480353 PPM1GO15355 546 aaPredicted RBP21.12■□□□□ 0.97
CDK9-203ENST00000480353 BCL9O00512 1426 aa21.12■□□□□ 0.97
CDK9-203ENST00000480353 RGPD3A6NKT7 1758 aaPredicted RBP21.11■□□□□ 0.97
CDK9-203ENST00000480353 RGPD4Q7Z3J3 1758 aa21.11■□□□□ 0.97
CDK9-203ENST00000480353 PLSCR1O15162 318 aa21.11■□□□□ 0.97
CDK9-203ENST00000480353 DDX54Q8TDD1 881 aaKnown RBP21.11■□□□□ 0.97
CDK9-203ENST00000480353 ACSBG1Q96GR2 724 aa21.11■□□□□ 0.97
CDK9-203ENST00000480353 FLT4P35916 1363 aa21.1■□□□□ 0.97
CDK9-203ENST00000480353 KIF24Q5T7B8 1368 aa21.09■□□□□ 0.97
CDK9-203ENST00000480353 MAP2P11137 1827 aaKnown RBP21.08■□□□□ 0.97
CDK9-203ENST00000480353 RAPGEF4Q8WZA2 1011 aa21.08■□□□□ 0.97
CDK9-203ENST00000480353 INSRP06213 1382 aa21.08■□□□□ 0.96
CDK9-203ENST00000480353 HSP90AB2PQ58FF8 381 aa21.07■□□□□ 0.96
CDK9-203ENST00000480353 PANK3Q9H999 370 aa21.07■□□□□ 0.96
CDK9-203ENST00000480353 NHSQ6T4R5 1651 aa21.07■□□□□ 0.96
CDK9-203ENST00000480353 ANKRD26Q9UPS8 1709 aa21.07■□□□□ 0.96
CDK9-203ENST00000480353 TATP17735 454 aaPredicted RBP21.06■□□□□ 0.96
CDK9-203ENST00000480353 PTF1AQ7RTS3 328 aa21.06■□□□□ 0.96
CDK9-203ENST00000480353 USHBP1Q8N6Y0 703 aa21.06■□□□□ 0.96
CDK9-203ENST00000480353 LRP5O75197 1615 aa21.06■□□□□ 0.96
CDK9-203ENST00000480353 TNNT2P45379 298 aaPredicted RBP21.05■□□□□ 0.96
CDK9-203ENST00000480353 NBPF6Q5VWK0 638 aa21.05■□□□□ 0.96
CDK9-203ENST00000480353 ZCRB1Q8TBF4 217 aaKnown RBP21.05■□□□□ 0.96
CDK9-203ENST00000480353 NBPF4Q96M43 638 aa21.05■□□□□ 0.96
CDK9-203ENST00000480353 EMILIN1Q9Y6C2 1016 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms