RNA–Protein interactions for RNA: ENST00000479815.5

HMGN2-208, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

TSL 5

Gene HMGN2, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-208ENST00000479815 SLAIN2Q9P270 581 aa11.73□□□□□ -0.53
HMGN2-208ENST00000479815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.72□□□□□ -0.53
HMGN2-208ENST00000479815 MED1Q15648 1581 aaPredicted RBP11.71□□□□□ -0.53
HMGN2-208ENST00000479815 PNPLA6Q8IY17 1366 aa11.71□□□□□ -0.53
HMGN2-208ENST00000479815 CCDC184Q52MB2 194 aa11.71□□□□□ -0.53
HMGN2-208ENST00000479815 COG3Q96JB2 828 aa11.71□□□□□ -0.53
HMGN2-208ENST00000479815 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
HMGN2-208ENST00000479815 MRS2Q9HD23 443 aa11.71□□□□□ -0.53
HMGN2-208ENST00000479815 AHDC1Q5TGY3 1603 aaPredicted RBP11.71□□□□□ -0.54
HMGN2-208ENST00000479815 SLIT3O75094 1523 aa11.7□□□□□ -0.54
HMGN2-208ENST00000479815 COL3A1P02461 1466 aaPredicted RBP11.7□□□□□ -0.54
HMGN2-208ENST00000479815 CDK12Q9NYV4 1490 aaPredicted RBP11.7□□□□□ -0.54
HMGN2-208ENST00000479815 TNS3Q68CZ2 1445 aa11.7□□□□□ -0.54
HMGN2-208ENST00000479815 USP19O94966 1318 aa11.7□□□□□ -0.54
HMGN2-208ENST00000479815 SOS2Q07890 1332 aaPredicted RBP11.7□□□□□ -0.54
HMGN2-208ENST00000479815 FOXO3O43524 673 aa11.7□□□□□ -0.54
HMGN2-208ENST00000479815 KIF24Q5T7B8 1368 aa11.69□□□□□ -0.54
HMGN2-208ENST00000479815 PSME1Q06323 249 aa11.69□□□□□ -0.54
HMGN2-208ENST00000479815 PNISRQ8TF01 805 aaKnown RBP11.69□□□□□ -0.54
HMGN2-208ENST00000479815 NFAT5O94916 1531 aa11.69□□□□□ -0.54
HMGN2-208ENST00000479815 PHRF1Q9P1Y6 1649 aaKnown RBP11.68□□□□□ -0.54
HMGN2-208ENST00000479815 ASTLQ6HA08 431 aaPredicted RBP11.68□□□□□ -0.54
HMGN2-208ENST00000479815 KRT28Q7Z3Y7 464 aa11.68□□□□□ -0.54
HMGN2-208ENST00000479815 ARHGEF10O15013 1369 aa11.67□□□□□ -0.54
HMGN2-208ENST00000479815 ROBO1Q9Y6N7 1651 aa11.67□□□□□ -0.54
HMGN2-208ENST00000479815 MAP2P11137 1827 aaKnown RBP11.67□□□□□ -0.54
HMGN2-208ENST00000479815 CRYBG1Q9Y4K1 1723 aa11.66□□□□□ -0.54
HMGN2-208ENST00000479815 SPATA31A3Q5VYP0 1347 aa11.66□□□□□ -0.54
HMGN2-208ENST00000479815 SHPRHQ149N8 1683 aa11.66□□□□□ -0.54
HMGN2-208ENST00000479815 ATMINO43313 823 aaPredicted RBP11.66□□□□□ -0.54
HMGN2-208ENST00000479815 CNGB1Q14028 1251 aaPredicted RBP11.66□□□□□ -0.54
HMGN2-208ENST00000479815 ABTB2Q8N961 1025 aa11.66□□□□□ -0.54
HMGN2-208ENST00000479815 POLKQ9UBT6 870 aa11.66□□□□□ -0.54
HMGN2-208ENST00000479815 RTL1A6NKG5 1358 aa11.66□□□□□ -0.54
HMGN2-208ENST00000479815 ABCC6O95255 1503 aa11.65□□□□□ -0.54
HMGN2-208ENST00000479815 MTHFSP49914 203 aa11.65□□□□□ -0.54
HMGN2-208ENST00000479815 NLRP6P59044 892 aa11.65□□□□□ -0.54
HMGN2-208ENST00000479815 METRNQ9UJH8 293 aa11.65□□□□□ -0.54
HMGN2-208ENST00000479815 BLMP54132 1417 aaPredicted RBP11.65□□□□□ -0.54
HMGN2-208ENST00000479815 TOM1O60784 492 aa11.64□□□□□ -0.55
HMGN2-208ENST00000479815 CFAP53Q96M91 514 aa11.64□□□□□ -0.55
HMGN2-208ENST00000479815 PEAK1Q9H792 1746 aa11.63□□□□□ -0.55
HMGN2-208ENST00000479815 TNNT2P45379 298 aaPredicted RBP11.63□□□□□ -0.55
HMGN2-208ENST00000479815 KCNH5Q8NCM2 988 aa11.63□□□□□ -0.55
HMGN2-208ENST00000479815 CERKQ8TCT0 537 aa11.63□□□□□ -0.55
HMGN2-208ENST00000479815 FLT4P35916 1363 aa11.63□□□□□ -0.55
HMGN2-208ENST00000479815 COL16A1Q07092 1604 aaPredicted RBP11.62□□□□□ -0.55
HMGN2-208ENST00000479815 COL22A1Q8NFW1 1626 aaPredicted RBP11.62□□□□□ -0.55
HMGN2-208ENST00000479815 XPCQ01831 940 aaPredicted RBP11.62□□□□□ -0.55
HMGN2-208ENST00000479815 MAP3K19Q56UN5 1328 aa11.61□□□□□ -0.55
HMGN2-208ENST00000479815 ABCA3Q99758 1704 aa11.61□□□□□ -0.55
HMGN2-208ENST00000479815 SLC39A7Q92504 469 aa11.61□□□□□ -0.55
HMGN2-208ENST00000479815 DDX17Q92841 729 aaKnown RBP11.61□□□□□ -0.55
HMGN2-208ENST00000479815 EMILIN1Q9Y6C2 1016 aa11.61□□□□□ -0.55
HMGN2-208ENST00000479815 CPDO75976 1380 aa11.61□□□□□ -0.55
HMGN2-208ENST00000479815 GCP02774 474 aa11.6□□□□□ -0.55
HMGN2-208ENST00000479815 RGPD1P0DJD0 1748 aa11.6□□□□□ -0.55
HMGN2-208ENST00000479815 LTN1O94822 1766 aa11.59□□□□□ -0.55
HMGN2-208ENST00000479815 C7P10643 843 aa11.59□□□□□ -0.55
HMGN2-208ENST00000479815 RRS1Q15050 365 aaKnown RBP11.59□□□□□ -0.55
HMGN2-208ENST00000479815 ARHGEF25Q86VW2 580 aa11.59□□□□□ -0.55
HMGN2-208ENST00000479815 KIF12Q96FN5 646 aa11.59□□□□□ -0.55
HMGN2-208ENST00000479815 PLSCR2Q9NRY7 297 aa11.59□□□□□ -0.55
HMGN2-208ENST00000479815 POTEJP0CG39 1038 aa11.58□□□□□ -0.56
HMGN2-208ENST00000479815 FBLN1P23142 703 aa11.58□□□□□ -0.56
HMGN2-208ENST00000479815 IL13P35225 146 aa11.58□□□□□ -0.56
HMGN2-208ENST00000479815 WDR43Q15061 677 aaKnown RBP eCLIP11.58□□□□□ -0.567e-7■□□□□ 8.4
HMGN2-208ENST00000479815 NUTM2GQ5VZR2 741 aa11.58□□□□□ -0.56
HMGN2-208ENST00000479815 FAM9BQ8IZU0 186 aa11.58□□□□□ -0.56
HMGN2-208ENST00000479815 PHLPP1O60346 1717 aa11.57□□□□□ -0.56
HMGN2-208ENST00000479815 COL18A1P39060 1754 aa11.57□□□□□ -0.56
HMGN2-208ENST00000479815 UBAP1LF5GYI3 381 aa11.57□□□□□ -0.56
HMGN2-208ENST00000479815 DIAPH1O60610 1272 aaKnown RBP11.57□□□□□ -0.56
HMGN2-208ENST00000479815 ATN1P54259 1190 aaPredicted RBP11.57□□□□□ -0.56
HMGN2-208ENST00000479815 RASEFQ8IZ41 740 aa11.57□□□□□ -0.56
HMGN2-208ENST00000479815 LRRC59Q96AG4 307 aaKnown RBP11.57□□□□□ -0.56
HMGN2-208ENST00000479815 ADAMTS8Q9UP79 889 aa11.57□□□□□ -0.56
HMGN2-208ENST00000479815 NUDCQ9Y266 331 aa11.57□□□□□ -0.56
HMGN2-208ENST00000479815 NCAPD2Q15021 1401 aa11.57□□□□□ -0.56
HMGN2-208ENST00000479815 HOXC9P31274 260 aa11.56□□□□□ -0.56
HMGN2-208ENST00000479815 IP6K1Q92551 441 aa11.56□□□□□ -0.56
HMGN2-208ENST00000479815 CAMTA1Q9Y6Y1 1673 aa11.55□□□□□ -0.56
HMGN2-208ENST00000479815 KDRP35968 1356 aa11.55□□□□□ -0.56
HMGN2-208ENST00000479815 NGEFQ8N5V2 710 aa11.55□□□□□ -0.56
HMGN2-208ENST00000479815 TRPC6Q9Y210 931 aa11.55□□□□□ -0.56
HMGN2-208ENST00000479815 LMO7Q8WWI1 1683 aa11.55□□□□□ -0.56
HMGN2-208ENST00000479815 ZBED9Q6R2W3 1325 aa11.55□□□□□ -0.56
HMGN2-208ENST00000479815 AMPHP49418 695 aa11.54□□□□□ -0.56
HMGN2-208ENST00000479815 EIF4A2Q14240 407 aaKnown RBP11.54□□□□□ -0.56
HMGN2-208ENST00000479815 HSP90AB2PQ58FF8 381 aa11.54□□□□□ -0.56
HMGN2-208ENST00000479815 LMOD2Q6P5Q4 547 aa11.54□□□□□ -0.56
HMGN2-208ENST00000479815 IGSF1Q8N6C5 1336 aa11.54□□□□□ -0.56
HMGN2-208ENST00000479815 MAP3K13O43283 966 aa11.53□□□□□ -0.56
HMGN2-208ENST00000479815 PLEKHG5O94827 1062 aa11.53□□□□□ -0.56
HMGN2-208ENST00000479815 FCHSD2O94868 740 aa11.53□□□□□ -0.56
HMGN2-208ENST00000479815 PLEKHG2Q9H7P9 1386 aa11.53□□□□□ -0.56
HMGN2-208ENST00000479815 FAM208AQ9UK61 1670 aaKnown RBP11.52□□□□□ -0.56
HMGN2-208ENST00000479815 PPM1GO15355 546 aaPredicted RBP11.52□□□□□ -0.57
HMGN2-208ENST00000479815 SOX12O15370 315 aa11.52□□□□□ -0.57
HMGN2-208ENST00000479815 U2AF1L5P0DN76 240 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms