RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 ZC3H6P61129 1189 aaKnown RBP14.82□□□□□ -0.04
APTX-223ENST00000479656 NEUROD2Q15784 382 aa14.82□□□□□ -0.04
APTX-223ENST00000479656 RSPH6AQ9H0K4 717 aa14.82□□□□□ -0.04
APTX-223ENST00000479656 PNNQ9H307 717 aaKnown RBP14.82□□□□□ -0.04
APTX-223ENST00000479656 MED1Q15648 1581 aaPredicted RBP14.81□□□□□ -0.04
APTX-223ENST00000479656 TOM1O60784 492 aa14.81□□□□□ -0.04
APTX-223ENST00000479656 RRP7AQ9Y3A4 280 aaKnown RBP14.81□□□□□ -0.04
APTX-223ENST00000479656 PRKAR2BP31323 418 aa14.8□□□□□ -0.04
APTX-223ENST00000479656 LTV1Q96GA3 475 aaPredicted RBP14.8□□□□□ -0.04
APTX-223ENST00000479656 ROBO1Q9Y6N7 1651 aa14.79□□□□□ -0.04
APTX-223ENST00000479656 LTN1O94822 1766 aa14.79□□□□□ -0.04
APTX-223ENST00000479656 PIP4K2BP78356 416 aa14.79□□□□□ -0.04
APTX-223ENST00000479656 SULT6B1Q6IMI4 303 aa14.79□□□□□ -0.04
APTX-223ENST00000479656 NHSL1Q5SYE7 1610 aa14.79□□□□□ -0.04
APTX-223ENST00000479656 MAPK8IP3Q9UPT6 1336 aa14.79□□□□□ -0.04
APTX-223ENST00000479656 AEBP1Q8IUX7 1158 aa14.78□□□□□ -0.04
APTX-223ENST00000479656 CDCA7LQ96GN5 454 aa14.78□□□□□ -0.04
APTX-223ENST00000479656 EYA1Q99502 592 aa14.78□□□□□ -0.04
APTX-223ENST00000479656 RTL1A6NKG5 1358 aa14.78□□□□□ -0.04
APTX-223ENST00000479656 PDE3BQ13370 1112 aa14.78□□□□□ -0.04
APTX-223ENST00000479656 PHACTR3Q96KR7 559 aa14.78□□□□□ -0.04
APTX-223ENST00000479656 UBAP1LF5GYI3 381 aa14.77□□□□□ -0.05
APTX-223ENST00000479656 NEFMP07197 916 aa14.77□□□□□ -0.05
APTX-223ENST00000479656 NGEFQ8N5V2 710 aa14.77□□□□□ -0.05
APTX-223ENST00000479656 LRRC59Q96AG4 307 aaKnown RBP14.77□□□□□ -0.05
APTX-223ENST00000479656 AXIN2Q9Y2T1 843 aa14.77□□□□□ -0.05
APTX-223ENST00000479656 ZNF521Q96K83 1311 aa14.77□□□□□ -0.05
APTX-223ENST00000479656 TMPOP42166 694 aaKnown RBP14.76□□□□□ -0.05
APTX-223ENST00000479656 WWC1Q8IX03 1113 aa14.76□□□□□ -0.05
APTX-223ENST00000479656 IQSEC2Q5JU85 1478 aa14.76□□□□□ -0.05
APTX-223ENST00000479656 HAP1P54257 671 aaPredicted RBP14.75□□□□□ -0.05
APTX-223ENST00000479656 GOLGA2Q08379 1002 aa14.75□□□□□ -0.05
APTX-223ENST00000479656 CHRNA2Q15822 529 aa14.75□□□□□ -0.05
APTX-223ENST00000479656 CERKQ8TCT0 537 aa14.75□□□□□ -0.05
APTX-223ENST00000479656 PHRF1Q9P1Y6 1649 aaKnown RBP14.75□□□□□ -0.05
APTX-223ENST00000479656 RIPK4P57078 832 aa14.74□□□□□ -0.05
APTX-223ENST00000479656 IGSF1Q8N6C5 1336 aa14.74□□□□□ -0.05
APTX-223ENST00000479656 CCDC27Q2M243 656 aa14.74□□□□□ -0.05
APTX-223ENST00000479656 NBPF6Q5VWK0 638 aa14.74□□□□□ -0.05
APTX-223ENST00000479656 ANKRD24Q8TF21 1146 aa14.74□□□□□ -0.05
APTX-223ENST00000479656 NBPF4Q96M43 638 aa14.74□□□□□ -0.05
APTX-223ENST00000479656 RGPD1P0DJD0 1748 aa14.73□□□□□ -0.05
APTX-223ENST00000479656 AHDC1Q5TGY3 1603 aaPredicted RBP14.73□□□□□ -0.05
APTX-223ENST00000479656 KIAA0232Q92628 1395 aa14.73□□□□□ -0.05
APTX-223ENST00000479656 NCBP3Q53F19 620 aaKnown RBP14.73□□□□□ -0.05
APTX-223ENST00000479656 CRYBG1Q9Y4K1 1723 aa14.73□□□□□ -0.05
APTX-223ENST00000479656 USHBP1Q8N6Y0 703 aa14.72□□□□□ -0.05
APTX-223ENST00000479656 SPINK5Q9NQ38 1064 aaPredicted RBP14.72□□□□□ -0.05
APTX-223ENST00000479656 TRIM35Q9UPQ4 493 aa14.72□□□□□ -0.05
APTX-223ENST00000479656 NFE2L2Q16236 605 aa14.72□□□□□ -0.05
APTX-223ENST00000479656 CPDO75976 1380 aa14.71□□□□□ -0.05
APTX-223ENST00000479656 SLFN5Q08AF3 891 aa14.71□□□□□ -0.05
APTX-223ENST00000479656 KDRP35968 1356 aa14.7□□□□□ -0.06
APTX-223ENST00000479656 WDR63Q8IWG1 891 aa14.7□□□□□ -0.06
APTX-223ENST00000479656 PRDM11Q9NQV5 511 aa14.7□□□□□ -0.06
APTX-223ENST00000479656 SUPT16HQ9Y5B9 1047 aaKnown RBP14.69□□□□□ -0.06
APTX-223ENST00000479656 DUSP27Q5VZP5 1158 aa14.69□□□□□ -0.06
APTX-223ENST00000479656 RGPD5Q99666 1765 aa14.69□□□□□ -0.06
APTX-223ENST00000479656 ERBB3P21860 1342 aa14.68□□□□□ -0.06
APTX-223ENST00000479656 COL18A1P39060 1754 aa14.68□□□□□ -0.06
APTX-223ENST00000479656 E9PSI1 815 aa14.68□□□□□ -0.06
APTX-223ENST00000479656 PHLPP1O60346 1717 aa14.68□□□□□ -0.06
APTX-223ENST00000479656 TRMT2AQ8IZ69 625 aaKnown RBP14.68□□□□□ -0.06
APTX-223ENST00000479656 MTHFSDQ2M296 383 aaKnown RBP14.67□□□□□ -0.06
APTX-223ENST00000479656 GTF3C3Q9Y5Q9 886 aa14.67□□□□□ -0.06
APTX-223ENST00000479656 FAM83GA6ND36 823 aa14.67□□□□□ -0.06
APTX-223ENST00000479656 CSB-PGBD3P0DP91 1061 aa14.67□□□□□ -0.06
APTX-223ENST00000479656 RGPD2P0DJD1 1756 aa14.66□□□□□ -0.06
APTX-223ENST00000479656 NLRP2Q9NX02 1062 aa14.66□□□□□ -0.06
APTX-223ENST00000479656 COL16A1Q07092 1604 aaPredicted RBP14.66□□□□□ -0.06
APTX-223ENST00000479656 ABCA3Q99758 1704 aa14.66□□□□□ -0.06
APTX-223ENST00000479656 THUMPD2Q9BTF0 503 aaKnown RBP14.65□□□□□ -0.06
APTX-223ENST00000479656 DCTN1Q14203 1278 aa14.64□□□□□ -0.07
APTX-223ENST00000479656 CAMTA1Q9Y6Y1 1673 aa14.64□□□□□ -0.07
APTX-223ENST00000479656 LMOD3Q0VAK6 560 aa14.63□□□□□ -0.07
APTX-223ENST00000479656 ABCC6O95255 1503 aa14.63□□□□□ -0.07
APTX-223ENST00000479656 GAS2L2Q8NHY3 880 aa14.63□□□□□ -0.07
APTX-223ENST00000479656 NUTM2BA6NNL0 878 aaPredicted RBP14.62□□□□□ -0.07
APTX-223ENST00000479656 NUTM2EB1AL46 878 aaPredicted RBP14.62□□□□□ -0.07
APTX-223ENST00000479656 EVA1CP58658 441 aa14.62□□□□□ -0.07
APTX-223ENST00000479656 NUTM2AQ8IVF1 878 aaPredicted RBP14.62□□□□□ -0.07
APTX-223ENST00000479656 RCAN3Q9UKA8 241 aa14.62□□□□□ -0.07
APTX-223ENST00000479656 COL22A1Q8NFW1 1626 aaPredicted RBP14.62□□□□□ -0.07
APTX-223ENST00000479656 IL16Q14005 1332 aa14.62□□□□□ -0.07
APTX-223ENST00000479656 DLG5Q8TDM6 1919 aa14.62□□□□□ -0.07
APTX-223ENST00000479656 NCAPD2Q15021 1401 aa14.61□□□□□ -0.07
APTX-223ENST00000479656 MCM10Q7L590 875 aa14.61□□□□□ -0.07
APTX-223ENST00000479656 MYH16Q9H6N6 1097 aa14.61□□□□□ -0.07
APTX-223ENST00000479656 STRN4Q9NRL3 753 aa14.61□□□□□ -0.07
APTX-223ENST00000479656 LAS1LQ9Y4W2 734 aaKnown RBP14.61□□□□□ -0.07
APTX-223ENST00000479656 ADAMTS2O95450 1211 aa14.61□□□□□ -0.07
APTX-223ENST00000479656 TOM1L2Q6ZVM7 507 aa14.61□□□□□ -0.07
APTX-223ENST00000479656 BTG4Q9NY30 223 aa14.61□□□□□ -0.07
APTX-223ENST00000479656 WDR17Q8IZU2 1322 aa14.6□□□□□ -0.07
APTX-223ENST00000479656 LMO7Q8WWI1 1683 aa14.6□□□□□ -0.07
APTX-223ENST00000479656 CALD1Q05682 793 aaKnown RBP14.6□□□□□ -0.07
APTX-223ENST00000479656 PLEKHO1Q53GL0 409 aaPredicted RBP14.6□□□□□ -0.07
APTX-223ENST00000479656 TSR2Q969E8 191 aaKnown RBP14.6□□□□□ -0.07
APTX-223ENST00000479656 GNAT3A8MTJ3 354 aa14.59□□□□□ -0.07
APTX-223ENST00000479656 LARP1Q6PKG0 1096 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms