RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 VSIG10Q8N0Z9 540 aa3.76□□□□□ -1.81
SRRM1-211ENST00000478890 RDH13Q8NBN7 331 aa3.76□□□□□ -1.81
SRRM1-211ENST00000478890 SH3BP2P78314 561 aa3.75□□□□□ -1.81
SRRM1-211ENST00000478890 PRSS36Q5K4E3 855 aa3.75□□□□□ -1.81
SRRM1-211ENST00000478890 ITPKCQ96DU7 683 aa3.75□□□□□ -1.81
SRRM1-211ENST00000478890 TSEN34Q9BSV6 310 aaKnown RBP3.75□□□□□ -1.81
SRRM1-211ENST00000478890 KDM2AQ9Y2K7 1162 aa3.75□□□□□ -1.81
SRRM1-211ENST00000478890 RNF114Q9Y508 228 aa3.75□□□□□ -1.81
SRRM1-211ENST00000478890 FIGNL2A6NMB9 653 aa3.74□□□□□ -1.81
SRRM1-211ENST00000478890 VARSP26640 1264 aaKnown RBP3.74□□□□□ -1.81
SRRM1-211ENST00000478890 DDX11L8A8MPP1 907 aa3.73□□□□□ -1.81
SRRM1-211ENST00000478890 SPTLC1O15269 473 aa3.73□□□□□ -1.81
SRRM1-211ENST00000478890 METTL3Q86U44 580 aaKnown RBP3.73□□□□□ -1.81
SRRM1-211ENST00000478890 PXYLP1Q8TE99 480 aa3.73□□□□□ -1.81
SRRM1-211ENST00000478890 USB1Q9BQ65 265 aaKnown RBP3.73□□□□□ -1.81
SRRM1-211ENST00000478890 GRIPAP1Q4V328 841 aa3.72□□□□□ -1.81
SRRM1-211ENST00000478890 KRI1Q8N9T8 703 aaKnown RBP3.72□□□□□ -1.81
SRRM1-211ENST00000478890 NLRP7Q8WX94 980 aa3.72□□□□□ -1.81
SRRM1-211ENST00000478890 SUV39H2Q9H5I1 410 aa3.72□□□□□ -1.81
SRRM1-211ENST00000478890 RRAGCQ9HB90 399 aa3.72□□□□□ -1.81
SRRM1-211ENST00000478890 NOP53Q9NZM5 478 aaKnown RBP3.72□□□□□ -1.81
SRRM1-211ENST00000478890 GNB5O14775 395 aa3.71□□□□□ -1.82
SRRM1-211ENST00000478890 SULF1Q8IWU6 871 aa3.71□□□□□ -1.82
SRRM1-211ENST00000478890 NSFL1CQ9UNZ2 370 aaKnown RBP3.71□□□□□ -1.82
SRRM1-211ENST00000478890 ELNP15502 786 aa3.7□□□□□ -1.82
SRRM1-211ENST00000478890 NR5A1Q13285 461 aa3.7□□□□□ -1.82
SRRM1-211ENST00000478890 FOXR1Q6PIV2 292 aa3.7□□□□□ -1.82
SRRM1-211ENST00000478890 LINC00114Q6XXX2 140 aa3.7□□□□□ -1.82
SRRM1-211ENST00000478890 DAXXQ9UER7 740 aaPredicted RBP3.7□□□□□ -1.82
SRRM1-211ENST00000478890 GPR37O15354 613 aa3.69□□□□□ -1.82
SRRM1-211ENST00000478890 IRAK1P51617 712 aa3.69□□□□□ -1.82
SRRM1-211ENST00000478890 MAP2K5Q13163 448 aa3.69□□□□□ -1.82
SRRM1-211ENST00000478890 TPSG1Q9NRR2 321 aa3.69□□□□□ -1.82
SRRM1-211ENST00000478890 SHISA8B8ZZ34 492 aa3.68□□□□□ -1.82
SRRM1-211ENST00000478890 GCGRP47871 477 aa3.68□□□□□ -1.82
SRRM1-211ENST00000478890 PTCRAQ6ISU1 281 aaPredicted RBP3.68□□□□□ -1.82
SRRM1-211ENST00000478890 GMCL1Q96IK5 515 aa3.68□□□□□ -1.82
SRRM1-211ENST00000478890 MDM2Q00987 491 aaPredicted RBP3.67□□□□□ -1.82
SRRM1-211ENST00000478890 FAM174AQ8TBP5 190 aa3.67□□□□□ -1.82
SRRM1-211ENST00000478890 CDK15Q96Q40 435 aa3.67□□□□□ -1.82
SRRM1-211ENST00000478890 SENP3-EIF4A1A0A087X0R7 540 aa3.66□□□□□ -1.82
SRRM1-211ENST00000478890 NR3C2P08235 984 aa3.66□□□□□ -1.82
SRRM1-211ENST00000478890 JUNDP17535 347 aa3.66□□□□□ -1.82
SRRM1-211ENST00000478890 TTLL12Q14166 644 aaPredicted RBP3.66□□□□□ -1.82
SRRM1-211ENST00000478890 CCDC102AQ96A19 550 aa3.66□□□□□ -1.82
SRRM1-211ENST00000478890 NUDT12Q9BQG2 462 aa3.66□□□□□ -1.82
SRRM1-211ENST00000478890 OXCT2Q9BYC2 517 aaPredicted RBP3.66□□□□□ -1.82
SRRM1-211ENST00000478890 IRF6O14896 467 aa3.65□□□□□ -1.83
SRRM1-211ENST00000478890 SPINT1O43278 529 aa3.65□□□□□ -1.83
SRRM1-211ENST00000478890 TAL1P17542 331 aaPredicted RBP3.65□□□□□ -1.83
SRRM1-211ENST00000478890 CLCN1P35523 988 aa3.65□□□□□ -1.83
SRRM1-211ENST00000478890 PHOX2BQ99453 314 aa3.65□□□□□ -1.83
SRRM1-211ENST00000478890 MINK1Q8N4C8 1332 aaPredicted RBP3.65□□□□□ -1.83
SRRM1-211ENST00000478890 KDM4AO75164 1064 aa3.64□□□□□ -1.83
SRRM1-211ENST00000478890 MX2P20592 715 aa3.64□□□□□ -1.83
SRRM1-211ENST00000478890 MAP2K3P46734 347 aa3.64□□□□□ -1.83
SRRM1-211ENST00000478890 NUTM1Q86Y26 1132 aa3.64□□□□□ -1.83
SRRM1-211ENST00000478890 GPCPD1Q9NPB8 672 aa3.64□□□□□ -1.83
SRRM1-211ENST00000478890 HOXB4P17483 251 aaPredicted RBP3.63□□□□□ -1.83
SRRM1-211ENST00000478890 ARID5BQ14865 1188 aa3.63□□□□□ -1.83
SRRM1-211ENST00000478890 LINC01559Q495D7 138 aa3.63□□□□□ -1.83
SRRM1-211ENST00000478890 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.63□□□□□ -1.83
SRRM1-211ENST00000478890 ZNF511Q8NB15 262 aa3.63□□□□□ -1.83
SRRM1-211ENST00000478890 ZNF837Q96EG3 531 aaPredicted RBP3.63□□□□□ -1.83
SRRM1-211ENST00000478890 CUEDC1Q9NWM3 386 aaPredicted RBP3.63□□□□□ -1.83
SRRM1-211ENST00000478890 GPR25O00155 361 aa3.62□□□□□ -1.83
SRRM1-211ENST00000478890 H2AFB1P0C5Y9 115 aa3.62□□□□□ -1.83
SRRM1-211ENST00000478890 H2AFB2P0C5Z0 115 aa3.62□□□□□ -1.83
SRRM1-211ENST00000478890 CD46P15529 392 aa3.62□□□□□ -1.83
SRRM1-211ENST00000478890 TRIM22Q8IYM9 498 aa3.62□□□□□ -1.83
SRRM1-211ENST00000478890 EDARADDQ8WWZ3 215 aa3.62□□□□□ -1.83
SRRM1-211ENST00000478890 BAP1Q92560 729 aa3.62□□□□□ -1.83
SRRM1-211ENST00000478890 TRERF1Q96PN7 1200 aa3.62□□□□□ -1.83
SRRM1-211ENST00000478890 GDF2Q9UK05 429 aaPredicted RBP3.62□□□□□ -1.83
SRRM1-211ENST00000478890 AMPD1P23109 780 aa3.61□□□□□ -1.83
SRRM1-211ENST00000478890 USP46P62068 366 aa3.61□□□□□ -1.83
SRRM1-211ENST00000478890 FBLN7Q53RD9 439 aa3.61□□□□□ -1.83
SRRM1-211ENST00000478890 RIC3Q7Z5B4 369 aa3.61□□□□□ -1.83
SRRM1-211ENST00000478890 UNC93B1Q9H1C4 597 aa3.61□□□□□ -1.83
SRRM1-211ENST00000478890 C6orf229H3BNL8 230 aa3.6□□□□□ -1.83
SRRM1-211ENST00000478890 HOXA2O43364 376 aa3.6□□□□□ -1.83
SRRM1-211ENST00000478890 SPATA31C1P0DKV0 1188 aa3.6□□□□□ -1.83
SRRM1-211ENST00000478890 GUCA2AQ02747 115 aa3.6□□□□□ -1.83
SRRM1-211ENST00000478890 KRTAP1-1Q07627 177 aa3.6□□□□□ -1.83
SRRM1-211ENST00000478890 ZC3H15Q8WU90 426 aaKnown RBP3.6□□□□□ -1.83
SRRM1-211ENST00000478890 HLA-CQ95604 372 aa3.6□□□□□ -1.83
SRRM1-211ENST00000478890 FAM217BQ9NTX9 383 aaPredicted RBP3.6□□□□□ -1.83
SRRM1-211ENST00000478890 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.83
SRRM1-211ENST00000478890 GRM5P41594 1212 aa3.59□□□□□ -1.83
SRRM1-211ENST00000478890 GIGYF2Q6Y7W6 1299 aaKnown RBP3.59□□□□□ -1.83
SRRM1-211ENST00000478890 EMILIN1Q9Y6C2 1016 aa3.59□□□□□ -1.83
SRRM1-211ENST00000478890 CCNYL3P0C7X3 344 aa3.58□□□□□ -1.84
SRRM1-211ENST00000478890 FDX1P10109 184 aa3.58□□□□□ -1.84
SRRM1-211ENST00000478890 SSTR3P32745 418 aaPredicted RBP3.58□□□□□ -1.84
SRRM1-211ENST00000478890 C1orf229Q6ZS94 237 aaPredicted RBP3.58□□□□□ -1.84
SRRM1-211ENST00000478890 BARGINQ6ZT62 677 aa3.58□□□□□ -1.84
SRRM1-211ENST00000478890 PCMTD2Q9NV79 361 aa3.58□□□□□ -1.84
SRRM1-211ENST00000478890 RNF112Q9ULX5 631 aa3.58□□□□□ -1.84
SRRM1-211ENST00000478890 ZMYND10O75800 440 aa3.57□□□□□ -1.84
SRRM1-211ENST00000478890 CTSOP43234 321 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms