RNA–Protein interactions for RNA: ENST00000478516.1

PFKFB4-212, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, humanhuman

TSL 3

Gene PFKFB4, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB4-212ENST00000478516 TMC1Q8TDI8 760 aa11.76□□□□□ -0.53
PFKFB4-212ENST00000478516 GTF3C3Q9Y5Q9 886 aa11.76□□□□□ -0.53
PFKFB4-212ENST00000478516 ZBED9Q6R2W3 1325 aa11.76□□□□□ -0.53
PFKFB4-212ENST00000478516 DCCP43146 1447 aa11.76□□□□□ -0.53
PFKFB4-212ENST00000478516 PTPRUQ92729 1446 aa11.76□□□□□ -0.53
PFKFB4-212ENST00000478516 SNPHO15079 494 aa11.75□□□□□ -0.53
PFKFB4-212ENST00000478516 NBR1Q14596 966 aa11.75□□□□□ -0.53
PFKFB4-212ENST00000478516 LRRC59Q96AG4 307 aaKnown RBP11.75□□□□□ -0.53
PFKFB4-212ENST00000478516 FAM212AQ96EL1 285 aa11.75□□□□□ -0.53
PFKFB4-212ENST00000478516 CARD14Q9BXL6 1004 aa11.75□□□□□ -0.53
PFKFB4-212ENST00000478516 NUTM2BA6NNL0 878 aaPredicted RBP11.74□□□□□ -0.53
PFKFB4-212ENST00000478516 NUTM2EB1AL46 878 aaPredicted RBP11.74□□□□□ -0.53
PFKFB4-212ENST00000478516 IRX5P78411 483 aaPredicted RBP11.74□□□□□ -0.53
PFKFB4-212ENST00000478516 HNRNPUQ00839 825 aaKnown RBP eCLIP11.74□□□□□ -0.53
PFKFB4-212ENST00000478516 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
PFKFB4-212ENST00000478516 NUTM2AQ8IVF1 878 aaPredicted RBP11.74□□□□□ -0.53
PFKFB4-212ENST00000478516 UPF1Q92900 1129 aaKnown RBP eCLIP11.74□□□□□ -0.53
PFKFB4-212ENST00000478516 TMEM121BQ9BXQ6 578 aaPredicted RBP11.74□□□□□ -0.53
PFKFB4-212ENST00000478516 ATAD2Q6PL18 1390 aa11.74□□□□□ -0.53
PFKFB4-212ENST00000478516 SPNS2Q8IVW8 549 aa11.73□□□□□ -0.53
PFKFB4-212ENST00000478516 FAM9BQ8IZU0 186 aa11.73□□□□□ -0.53
PFKFB4-212ENST00000478516 ANKRD36BQ8N2N9 1353 aa11.73□□□□□ -0.53
PFKFB4-212ENST00000478516 PRAM1Q96QH2 718 aa11.73□□□□□ -0.53
PFKFB4-212ENST00000478516 OCEL1Q9H607 264 aa11.73□□□□□ -0.53
PFKFB4-212ENST00000478516 CIZ1Q9ULV3 898 aaPredicted RBP11.73□□□□□ -0.53
PFKFB4-212ENST00000478516 USP32Q8NFA0 1604 aa11.72□□□□□ -0.53
PFKFB4-212ENST00000478516 METP08581 1390 aa11.72□□□□□ -0.53
PFKFB4-212ENST00000478516 MST1RQ04912 1400 aa11.71□□□□□ -0.53
PFKFB4-212ENST00000478516 NSD2O96028 1365 aa11.71□□□□□ -0.53
PFKFB4-212ENST00000478516 PPP2R1AP30153 589 aa11.71□□□□□ -0.53
PFKFB4-212ENST00000478516 CC2D1BQ5T0F9 858 aaKnown RBP11.71□□□□□ -0.53
PFKFB4-212ENST00000478516 SLC12A5Q9H2X9 1139 aa11.71□□□□□ -0.53
PFKFB4-212ENST00000478516 POGKQ9P215 609 aa11.71□□□□□ -0.53
PFKFB4-212ENST00000478516 STK26Q9P289 416 aa11.71□□□□□ -0.53
PFKFB4-212ENST00000478516 KNDC1Q76NI1 1749 aa11.71□□□□□ -0.54
PFKFB4-212ENST00000478516 XRN1Q8IZH2 1706 aaKnown RBP11.71□□□□□ -0.54
PFKFB4-212ENST00000478516 AFF2P51816 1311 aa11.7□□□□□ -0.54
PFKFB4-212ENST00000478516 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.7□□□□□ -0.54
PFKFB4-212ENST00000478516 QTRT2Q9H974 415 aaKnown RBP11.69□□□□□ -0.54
PFKFB4-212ENST00000478516 CDK12Q9NYV4 1490 aaPredicted RBP11.69□□□□□ -0.54
PFKFB4-212ENST00000478516 NHSL1Q5SYE7 1610 aa11.68□□□□□ -0.54
PFKFB4-212ENST00000478516 C8orf37Q96NL8 207 aa11.68□□□□□ -0.54
PFKFB4-212ENST00000478516 ADGRL3Q9HAR2 1447 aa11.68□□□□□ -0.54
PFKFB4-212ENST00000478516 CGNL1Q0VF96 1302 aa11.67□□□□□ -0.54
PFKFB4-212ENST00000478516 RBM6P78332 1123 aaKnown RBP11.67□□□□□ -0.54
PFKFB4-212ENST00000478516 DDX17Q92841 729 aaKnown RBP11.67□□□□□ -0.54
PFKFB4-212ENST00000478516 CDK19Q9BWU1 502 aa11.67□□□□□ -0.54
PFKFB4-212ENST00000478516 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
PFKFB4-212ENST00000478516 NSD3Q9BZ95 1437 aa11.67□□□□□ -0.54
PFKFB4-212ENST00000478516 TERF2IPQ9NYB0 399 aa11.66□□□□□ -0.54
PFKFB4-212ENST00000478516 BLMP54132 1417 aaPredicted RBP11.66□□□□□ -0.54
PFKFB4-212ENST00000478516 POLR3AO14802 1390 aaPredicted RBP11.66□□□□□ -0.54
PFKFB4-212ENST00000478516 PNPLA6Q8IY17 1366 aa11.66□□□□□ -0.54
PFKFB4-212ENST00000478516 PLEKHH1Q9ULM0 1364 aa11.66□□□□□ -0.54
PFKFB4-212ENST00000478516 MINK1Q8N4C8 1332 aaPredicted RBP11.65□□□□□ -0.54
PFKFB4-212ENST00000478516 CD163L1Q9NR16 1453 aa11.65□□□□□ -0.54
PFKFB4-212ENST00000478516 WASLO00401 505 aaPredicted RBP11.65□□□□□ -0.54
PFKFB4-212ENST00000478516 SRPK2P78362 688 aaKnown RBP11.65□□□□□ -0.54
PFKFB4-212ENST00000478516 MARVELD3Q96A59 401 aa11.65□□□□□ -0.54
PFKFB4-212ENST00000478516 NGLY1Q96IV0 654 aa11.65□□□□□ -0.54
PFKFB4-212ENST00000478516 ATP7BP35670 1465 aa11.64□□□□□ -0.55
PFKFB4-212ENST00000478516 C1orf167Q5SNV9 1468 aa11.64□□□□□ -0.55
PFKFB4-212ENST00000478516 ADGRB2O60241 1585 aa11.64□□□□□ -0.55
PFKFB4-212ENST00000478516 PTCH1Q13635 1447 aa11.64□□□□□ -0.55
PFKFB4-212ENST00000478516 PDE3BQ13370 1112 aa11.64□□□□□ -0.55
PFKFB4-212ENST00000478516 WAPLQ7Z5K2 1190 aa11.64□□□□□ -0.55
PFKFB4-212ENST00000478516 A0A1W2PP64 1363 aa11.64□□□□□ -0.55
PFKFB4-212ENST00000478516 NALCNQ8IZF0 1738 aa11.63□□□□□ -0.55
PFKFB4-212ENST00000478516 SMG6Q86US8 1419 aaKnown RBP11.63□□□□□ -0.55
PFKFB4-212ENST00000478516 ADAMTS2O95450 1211 aa11.63□□□□□ -0.55
PFKFB4-212ENST00000478516 CNGB1Q14028 1251 aaPredicted RBP11.63□□□□□ -0.55
PFKFB4-212ENST00000478516 SAFB2Q14151 953 aaKnown RBP eCLIP11.63□□□□□ -0.55
PFKFB4-212ENST00000478516 DCAF8Q5TAQ9 597 aa11.63□□□□□ -0.55
PFKFB4-212ENST00000478516 ORAI2Q96SN7 254 aa11.63□□□□□ -0.55
PFKFB4-212ENST00000478516 ROBO2Q9HCK4 1378 aa11.63□□□□□ -0.55
PFKFB4-212ENST00000478516 SOS2Q07890 1332 aaPredicted RBP11.62□□□□□ -0.55
PFKFB4-212ENST00000478516 CPSF1Q10570 1443 aaKnown RBP11.62□□□□□ -0.55
PFKFB4-212ENST00000478516 HDGFL2Q7Z4V5 671 aaPredicted RBP11.62□□□□□ -0.55
PFKFB4-212ENST00000478516 NGEFQ8N5V2 710 aa11.62□□□□□ -0.55
PFKFB4-212ENST00000478516 MORC1Q86VD1 984 aa11.61□□□□□ -0.55
PFKFB4-212ENST00000478516 USP21Q9UK80 565 aa11.61□□□□□ -0.55
PFKFB4-212ENST00000478516 TRPC5Q9UL62 973 aaPredicted RBP11.61□□□□□ -0.55
PFKFB4-212ENST00000478516 RGS12O14924 1447 aa11.6□□□□□ -0.55
PFKFB4-212ENST00000478516 CABP1Q9NZU7 370 aa11.6□□□□□ -0.55
PFKFB4-212ENST00000478516 PLEKHG3A1L390 1219 aa11.59□□□□□ -0.55
PFKFB4-212ENST00000478516 FYB1O15117 783 aa11.59□□□□□ -0.55
PFKFB4-212ENST00000478516 PYGBP11216 843 aa11.59□□□□□ -0.55
PFKFB4-212ENST00000478516 ESCO1Q5FWF5 840 aa11.59□□□□□ -0.55
PFKFB4-212ENST00000478516 ERICH6BQ5W0A0 696 aa11.59□□□□□ -0.55
PFKFB4-212ENST00000478516 FNBP4Q8N3X1 1017 aaPredicted RBP11.59□□□□□ -0.55
PFKFB4-212ENST00000478516 ADAMTS8Q9UP79 889 aa11.59□□□□□ -0.55
PFKFB4-212ENST00000478516 NUDCQ9Y266 331 aa11.59□□□□□ -0.55
PFKFB4-212ENST00000478516 CDC42BPGQ6DT37 1551 aa11.58□□□□□ -0.55
PFKFB4-212ENST00000478516 HS6ST3Q8IZP7 471 aa11.58□□□□□ -0.56
PFKFB4-212ENST00000478516 NUDT16Q96DE0 195 aaKnown RBP11.58□□□□□ -0.56
PFKFB4-212ENST00000478516 RNF123Q5XPI4 1314 aa11.58□□□□□ -0.56
PFKFB4-212ENST00000478516 NPHP3Q7Z494 1330 aa11.58□□□□□ -0.56
PFKFB4-212ENST00000478516 WDR43Q15061 677 aaKnown RBP eCLIP11.57□□□□□ -0.56
PFKFB4-212ENST00000478516 SUPT16HQ9Y5B9 1047 aaKnown RBP11.57□□□□□ -0.56
PFKFB4-212ENST00000478516 EDC4Q6P2E9 1401 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms