RNA–Protein interactions for RNA: ENST00000478336.5

ARF1-208, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 930 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-208ENST00000478336 RGPD5Q99666 1765 aa33.11■■■□□ 2.89
ARF1-208ENST00000478336 PANK3Q9H999 370 aa33.11■■■□□ 2.89
ARF1-208ENST00000478336 AXIN2Q9Y2T1 843 aa33.11■■■□□ 2.89
ARF1-208ENST00000478336 EVA1CP58658 441 aa33.1■■■□□ 2.89
ARF1-208ENST00000478336 CCDC7Q96M83 1385 aa33.09■■■□□ 2.89
ARF1-208ENST00000478336 SPATA31A1Q5TZJ5 1347 aa33.09■■■□□ 2.89
ARF1-208ENST00000478336 ONECUT3O60422 494 aaPredicted RBP33.09■■■□□ 2.89
ARF1-208ENST00000478336 LARP1Q6PKG0 1096 aaKnown RBP33.08■■■□□ 2.89
ARF1-208ENST00000478336 CGNL1Q0VF96 1302 aa33.07■■■□□ 2.88
ARF1-208ENST00000478336 WASHC2AQ641Q2 1341 aa33.06■■■□□ 2.88
ARF1-208ENST00000478336 THSD7AQ9UPZ6 1657 aa33.04■■■□□ 2.88
ARF1-208ENST00000478336 CRB1P82279 1406 aa33.04■■■□□ 2.88
ARF1-208ENST00000478336 ANKRD26Q9UPS8 1709 aa33.04■■■□□ 2.88
ARF1-208ENST00000478336 BRWD3Q6RI45 1802 aa33.03■■■□□ 2.88
ARF1-208ENST00000478336 FAM98CQ17RN3 349 aaKnown RBP33.03■■■□□ 2.88
ARF1-208ENST00000478336 SEPT12Q8IYM1 358 aa33.03■■■□□ 2.88
ARF1-208ENST00000478336 WDR17Q8IZU2 1322 aa33.02■■■□□ 2.88
ARF1-208ENST00000478336 MAP3K19Q56UN5 1328 aa33.02■■■□□ 2.88
ARF1-208ENST00000478336 FBLN1P23142 703 aa33■■■□□ 2.87
ARF1-208ENST00000478336 BLMP54132 1417 aaPredicted RBP32.99■■■□□ 2.87
ARF1-208ENST00000478336 USP35Q9P2H5 1018 aa32.98■■■□□ 2.87
ARF1-208ENST00000478336 BARGINQ6ZT62 677 aa32.97■■■□□ 2.87
ARF1-208ENST00000478336 TCP11L2Q8N4U5 519 aa32.97■■■□□ 2.87
ARF1-208ENST00000478336 IP6K1Q92551 441 aa32.97■■■□□ 2.87
ARF1-208ENST00000478336 ERBB3P21860 1342 aa32.97■■■□□ 2.87
ARF1-208ENST00000478336 RTL1A6NKG5 1358 aa32.96■■■□□ 2.87
ARF1-208ENST00000478336 NSD2O96028 1365 aa32.96■■■□□ 2.87
ARF1-208ENST00000478336 RRS1Q15050 365 aaKnown RBP32.95■■■□□ 2.87
ARF1-208ENST00000478336 TOM1L2Q6ZVM7 507 aa32.95■■■□□ 2.87
ARF1-208ENST00000478336 THRAP3Q9Y2W1 955 aaKnown RBP32.95■■■□□ 2.87
ARF1-208ENST00000478336 CSB-PGBD3P0DP91 1061 aa32.93■■■□□ 2.86
ARF1-208ENST00000478336 HOXC9P31274 260 aa32.93■■■□□ 2.86
ARF1-208ENST00000478336 PEAK1Q9H792 1746 aa32.93■■■□□ 2.86
ARF1-208ENST00000478336 A0A0G2JS52 829 aa32.92■■■□□ 2.86
ARF1-208ENST00000478336 MYT1Q01538 1121 aa32.92■■■□□ 2.86
ARF1-208ENST00000478336 KNSTRNQ9Y448 316 aa32.92■■■□□ 2.86
ARF1-208ENST00000478336 WNK3Q9BYP7 1800 aa32.92■■■□□ 2.86
ARF1-208ENST00000478336 ZEB1P37275 1124 aaPredicted RBP32.91■■■□□ 2.86
ARF1-208ENST00000478336 CARD10Q9BWT7 1032 aa32.91■■■□□ 2.86
ARF1-208ENST00000478336 AMPHP49418 695 aa32.9■■■□□ 2.86
ARF1-208ENST00000478336 ANKRD24Q8TF21 1146 aa32.9■■■□□ 2.86
ARF1-208ENST00000478336 KIF24Q5T7B8 1368 aa32.9■■■□□ 2.86
ARF1-208ENST00000478336 PARP4Q9UKK3 1724 aaKnown RBP32.89■■■□□ 2.86
ARF1-208ENST00000478336 FAM208AQ9UK61 1670 aaKnown RBP32.89■■■□□ 2.86
ARF1-208ENST00000478336 PER1O15534 1290 aaPredicted RBP32.89■■■□□ 2.86
ARF1-208ENST00000478336 AMER1Q5JTC6 1135 aaPredicted RBP32.88■■■□□ 2.85
ARF1-208ENST00000478336 KRT27Q7Z3Y8 459 aa32.88■■■□□ 2.85
ARF1-208ENST00000478336 UPF1Q92900 1129 aaKnown RBP eCLIP32.87■■■□□ 2.853e-93■■■■■ 111.5
ARF1-208ENST00000478336 FLT4P35916 1363 aa32.86■■■□□ 2.85
ARF1-208ENST00000478336 MAP2P11137 1827 aaKnown RBP32.86■■■□□ 2.85
ARF1-208ENST00000478336 EMILIN1Q9Y6C2 1016 aa32.84■■■□□ 2.85
ARF1-208ENST00000478336 DISP2A7MBM2 1401 aa32.84■■■□□ 2.85
ARF1-208ENST00000478336 LRRC37A3O60309 1634 aa32.83■■■□□ 2.85
ARF1-208ENST00000478336 INSRP06213 1382 aa32.83■■■□□ 2.85
ARF1-208ENST00000478336 NLRP2Q9NX02 1062 aa32.82■■■□□ 2.84
ARF1-208ENST00000478336 EP400Q96L91 3159 aa32.82■■■□□ 2.84
ARF1-208ENST00000478336 LTV1Q96GA3 475 aaPredicted RBP32.81■■■□□ 2.84
ARF1-208ENST00000478336 POLKQ9UBT6 870 aa32.8■■■□□ 2.84
ARF1-208ENST00000478336 HSP90AB2PQ58FF8 381 aa32.79■■■□□ 2.84
ARF1-208ENST00000478336 CDCA7Q9BWT1 371 aaPredicted RBP32.79■■■□□ 2.84
ARF1-208ENST00000478336 TNNT2P45379 298 aaPredicted RBP32.78■■■□□ 2.84
ARF1-208ENST00000478336 MORC1Q86VD1 984 aa32.78■■■□□ 2.84
ARF1-208ENST00000478336 RGPD2P0DJD1 1756 aa32.78■■■□□ 2.84
ARF1-208ENST00000478336 SMG6Q86US8 1419 aaKnown RBP32.77■■■□□ 2.84
ARF1-208ENST00000478336 NPC1L1Q9UHC9 1359 aa32.77■■■□□ 2.84
ARF1-208ENST00000478336 PPM1GO15355 546 aaPredicted RBP32.72■■■□□ 2.83
ARF1-208ENST00000478336 PDE3BQ13370 1112 aa32.72■■■□□ 2.83
ARF1-208ENST00000478336 DDB1Q16531 1140 aa32.71■■■□□ 2.83
ARF1-208ENST00000478336 FAM182BQ5T319 152 aa32.71■■■□□ 2.83
ARF1-208ENST00000478336 CC2D1BQ5T0F9 858 aaKnown RBP32.7■■■□□ 2.83
ARF1-208ENST00000478336 TNS2Q63HR2 1409 aa32.69■■■□□ 2.82
ARF1-208ENST00000478336 IL2RBP14784 551 aa32.68■■■□□ 2.82
ARF1-208ENST00000478336 NBPF6Q5VWK0 638 aa32.68■■■□□ 2.82
ARF1-208ENST00000478336 NBPF4Q96M43 638 aa32.68■■■□□ 2.82
ARF1-208ENST00000478336 CCDC125Q86Z20 511 aa32.66■■■□□ 2.82
ARF1-208ENST00000478336 FAM196AQ6ZSG2 479 aa32.65■■■□□ 2.82
ARF1-208ENST00000478336 NCAPD2Q15021 1401 aa32.64■■■□□ 2.82
ARF1-208ENST00000478336 OVOS2A0A0G2JMS6 1433 aa32.63■■■□□ 2.81
ARF1-208ENST00000478336 RGPD1P0DJD0 1748 aa32.63■■■□□ 2.81
ARF1-208ENST00000478336 MEGF6O75095 1541 aa32.62■■■□□ 2.81
ARF1-208ENST00000478336 EXOC5O00471 708 aa32.62■■■□□ 2.81
ARF1-208ENST00000478336 USHBP1Q8N6Y0 703 aa32.61■■■□□ 2.81
ARF1-208ENST00000478336 MARCH10Q8NA82 808 aaPredicted RBP32.6■■■□□ 2.81
ARF1-208ENST00000478336 TNS1Q9HBL0 1735 aaKnown RBP32.6■■■□□ 2.81
ARF1-208ENST00000478336 EIF4A2Q14240 407 aaKnown RBP32.59■■■□□ 2.81
ARF1-208ENST00000478336 BCL9O00512 1426 aa32.58■■■□□ 2.81
ARF1-208ENST00000478336 EYA1Q99502 592 aa32.56■■■□□ 2.8
ARF1-208ENST00000478336 SHANK3Q9BYB0 1731 aa32.55■■■□□ 2.8
ARF1-208ENST00000478336 CNGB1Q14028 1251 aaPredicted RBP32.55■■■□□ 2.8
ARF1-208ENST00000478336 SBF2Q86WG5 1849 aa32.55■■■□□ 2.8
ARF1-208ENST00000478336 MTHFSP49914 203 aa32.53■■■□□ 2.8
ARF1-208ENST00000478336 SF3B2Q13435 895 aaKnown RBP32.52■■■□□ 2.8
ARF1-208ENST00000478336 RAPGEF4Q8WZA2 1011 aa32.52■■■□□ 2.8
ARF1-208ENST00000478336 TRIM37O94972 964 aa32.51■■■□□ 2.79
ARF1-208ENST00000478336 IGSF1Q8N6C5 1336 aa32.51■■■□□ 2.79
ARF1-208ENST00000478336 TATP17735 454 aaPredicted RBP32.48■■■□□ 2.79
ARF1-208ENST00000478336 DEFB132Q7Z7B7 95 aa32.48■■■□□ 2.79
ARF1-208ENST00000478336 PKD1L3Q7Z443 1732 aa32.48■■■□□ 2.79
ARF1-208ENST00000478336 DDX10Q13206 875 aaKnown RBP32.47■■■□□ 2.79
ARF1-208ENST00000478336 ZCRB1Q8TBF4 217 aaKnown RBP32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms