RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 EVA1CP58658 441 aa31.05■■■□□ 2.56
SF1-214ENST00000477596 SEPT12Q8IYM1 358 aa31.05■■■□□ 2.56
SF1-214ENST00000477596 AXIN2Q9Y2T1 843 aa31.05■■■□□ 2.56
SF1-214ENST00000477596 THSD7AQ9UPZ6 1657 aa31.03■■■□□ 2.56
SF1-214ENST00000477596 GGNBP2Q9H3C7 697 aa31.02■■■□□ 2.56
SF1-214ENST00000477596 USP35Q9P2H5 1018 aa31.02■■■□□ 2.56
SF1-214ENST00000477596 A0A0G2JS52 829 aa31.01■■■□□ 2.55
SF1-214ENST00000477596 FYB1O15117 783 aa31.01■■■□□ 2.55
SF1-214ENST00000477596 ONECUT3O60422 494 aaPredicted RBP31.01■■■□□ 2.55
SF1-214ENST00000477596 MYT1Q01538 1121 aa31.01■■■□□ 2.55
SF1-214ENST00000477596 COG3Q96JB2 828 aa31.01■■■□□ 2.55
SF1-214ENST00000477596 ABCC6O95255 1503 aa30.99■■■□□ 2.55
SF1-214ENST00000477596 UPF1Q92900 1129 aaKnown RBP eCLIP30.99■■■□□ 2.55
SF1-214ENST00000477596 FBLN1P23142 703 aa30.98■■■□□ 2.55
SF1-214ENST00000477596 EP400Q96L91 3159 aa30.96■■■□□ 2.55
SF1-214ENST00000477596 CRB1P82279 1406 aa30.96■■■□□ 2.55
SF1-214ENST00000477596 KIF7Q2M1P5 1343 aa30.96■■■□□ 2.55
SF1-214ENST00000477596 WDR17Q8IZU2 1322 aa30.93■■■□□ 2.54
SF1-214ENST00000477596 TOM1L2Q6ZVM7 507 aa30.91■■■□□ 2.54
SF1-214ENST00000477596 TCP11L2Q8N4U5 519 aa30.91■■■□□ 2.54
SF1-214ENST00000477596 PANK3Q9H999 370 aa30.91■■■□□ 2.54
SF1-214ENST00000477596 KRT27Q7Z3Y8 459 aa30.9■■■□□ 2.54
SF1-214ENST00000477596 MAP3K19Q56UN5 1328 aa30.9■■■□□ 2.54
SF1-214ENST00000477596 BARGINQ6ZT62 677 aa30.89■■■□□ 2.54
SF1-214ENST00000477596 WNK3Q9BYP7 1800 aa30.89■■■□□ 2.53
SF1-214ENST00000477596 CSB-PGBD3P0DP91 1061 aa30.88■■■□□ 2.53
SF1-214ENST00000477596 RRS1Q15050 365 aaKnown RBP30.87■■■□□ 2.53
SF1-214ENST00000477596 ERBB3P21860 1342 aa30.86■■■□□ 2.53
SF1-214ENST00000477596 CGNL1Q0VF96 1302 aa30.86■■■□□ 2.53
SF1-214ENST00000477596 FAM182BQ5T319 152 aa30.85■■■□□ 2.53
SF1-214ENST00000477596 PARP4Q9UKK3 1724 aaKnown RBP30.84■■■□□ 2.53
SF1-214ENST00000477596 ANKRD26Q9UPS8 1709 aa30.84■■■□□ 2.53
SF1-214ENST00000477596 THRAP3Q9Y2W1 955 aaKnown RBP30.84■■■□□ 2.53
SF1-214ENST00000477596 PEAK1Q9H792 1746 aa30.84■■■□□ 2.53
SF1-214ENST00000477596 BLMP54132 1417 aaPredicted RBP30.83■■■□□ 2.53
SF1-214ENST00000477596 ANKRD24Q8TF21 1146 aa30.83■■■□□ 2.53
SF1-214ENST00000477596 IP6K1Q92551 441 aa30.83■■■□□ 2.53
SF1-214ENST00000477596 LRRC37A3O60309 1634 aa30.83■■■□□ 2.53
SF1-214ENST00000477596 CCDC7Q96M83 1385 aa30.81■■■□□ 2.52
SF1-214ENST00000477596 HOXC9P31274 260 aa30.81■■■□□ 2.52
SF1-214ENST00000477596 WASHC2AQ641Q2 1341 aa30.8■■■□□ 2.52
SF1-214ENST00000477596 AMPHP49418 695 aa30.8■■■□□ 2.52
SF1-214ENST00000477596 LTV1Q96GA3 475 aaPredicted RBP30.8■■■□□ 2.52
SF1-214ENST00000477596 CARD10Q9BWT7 1032 aa30.8■■■□□ 2.52
SF1-214ENST00000477596 RTL1A6NKG5 1358 aa30.79■■■□□ 2.52
SF1-214ENST00000477596 DISP2A7MBM2 1401 aa30.78■■■□□ 2.52
SF1-214ENST00000477596 NLRP2Q9NX02 1062 aa30.77■■■□□ 2.52
SF1-214ENST00000477596 FAM208AQ9UK61 1670 aaKnown RBP30.75■■■□□ 2.51
SF1-214ENST00000477596 RGPD2P0DJD1 1756 aa30.75■■■□□ 2.51
SF1-214ENST00000477596 EMILIN1Q9Y6C2 1016 aa30.75■■■□□ 2.51
SF1-214ENST00000477596 TNNT2P45379 298 aaPredicted RBP30.72■■■□□ 2.51
SF1-214ENST00000477596 PDE3BQ13370 1112 aa30.71■■■□□ 2.51
SF1-214ENST00000477596 MAP2P11137 1827 aaKnown RBP30.7■■■□□ 2.51
SF1-214ENST00000477596 FLT4P35916 1363 aa30.7■■■□□ 2.51
SF1-214ENST00000477596 HSP90AB2PQ58FF8 381 aa30.7■■■□□ 2.51
SF1-214ENST00000477596 NSD2O96028 1365 aa30.69■■■□□ 2.5
SF1-214ENST00000477596 KNSTRNQ9Y448 316 aa30.69■■■□□ 2.5
SF1-214ENST00000477596 DDB1Q16531 1140 aa30.68■■■□□ 2.5
SF1-214ENST00000477596 INSRP06213 1382 aa30.66■■■□□ 2.5
SF1-214ENST00000477596 PPM1GO15355 546 aaPredicted RBP30.66■■■□□ 2.5
SF1-214ENST00000477596 AMER1Q5JTC6 1135 aaPredicted RBP30.66■■■□□ 2.5
SF1-214ENST00000477596 TNS1Q9HBL0 1735 aaKnown RBP30.66■■■□□ 2.5
SF1-214ENST00000477596 KIF24Q5T7B8 1368 aa30.66■■■□□ 2.5
SF1-214ENST00000477596 RGPD1P0DJD0 1748 aa30.65■■■□□ 2.5
SF1-214ENST00000477596 CCDC125Q86Z20 511 aa30.65■■■□□ 2.5
SF1-214ENST00000477596 CDCA7Q9BWT1 371 aaPredicted RBP30.65■■■□□ 2.5
SF1-214ENST00000477596 TNS2Q63HR2 1409 aa30.64■■■□□ 2.5
SF1-214ENST00000477596 POLKQ9UBT6 870 aa30.64■■■□□ 2.5
SF1-214ENST00000477596 PER1O15534 1290 aaPredicted RBP30.63■■■□□ 2.49
SF1-214ENST00000477596 FAM196AQ6ZSG2 479 aa30.63■■■□□ 2.49
SF1-214ENST00000477596 DEFB132Q7Z7B7 95 aa30.63■■■□□ 2.49
SF1-214ENST00000477596 SMG6Q86US8 1419 aaKnown RBP30.63■■■□□ 2.49
SF1-214ENST00000477596 IL2RBP14784 551 aa30.62■■■□□ 2.49
SF1-214ENST00000477596 USHBP1Q8N6Y0 703 aa30.62■■■□□ 2.49
SF1-214ENST00000477596 NBPF6Q5VWK0 638 aa30.61■■■□□ 2.49
SF1-214ENST00000477596 MORC1Q86VD1 984 aa30.61■■■□□ 2.49
SF1-214ENST00000477596 MARCH10Q8NA82 808 aaPredicted RBP30.61■■■□□ 2.49
SF1-214ENST00000477596 NBPF4Q96M43 638 aa30.61■■■□□ 2.49
SF1-214ENST00000477596 OVOS2A0A0G2JMS6 1433 aa30.61■■■□□ 2.49
SF1-214ENST00000477596 MEGF6O75095 1541 aa30.59■■■□□ 2.49
SF1-214ENST00000477596 TRIM37O94972 964 aa30.59■■■□□ 2.49
SF1-214ENST00000477596 SF3B2Q13435 895 aaKnown RBP30.59■■■□□ 2.49
SF1-214ENST00000477596 EXOC5O00471 708 aa30.56■■■□□ 2.48
SF1-214ENST00000477596 SBF2Q86WG5 1849 aa30.56■■■□□ 2.48
SF1-214ENST00000477596 CC2D1BQ5T0F9 858 aaKnown RBP30.55■■■□□ 2.48
SF1-214ENST00000477596 CNGB1Q14028 1251 aaPredicted RBP30.54■■■□□ 2.48
SF1-214ENST00000477596 SHANK3Q9BYB0 1731 aa30.53■■■□□ 2.48
SF1-214ENST00000477596 BAG6P46379 1132 aa30.5■■■□□ 2.47
SF1-214ENST00000477596 EN1Q05925 392 aaPredicted RBP30.49■■■□□ 2.47
SF1-214ENST00000477596 EIF4A2Q14240 407 aaKnown RBP30.49■■■□□ 2.47
SF1-214ENST00000477596 PTF1AQ7RTS3 328 aa30.49■■■□□ 2.47
SF1-214ENST00000477596 NCAPD2Q15021 1401 aa30.48■■■□□ 2.47
SF1-214ENST00000477596 BCL9O00512 1426 aa30.47■■■□□ 2.47
SF1-214ENST00000477596 NPC1L1Q9UHC9 1359 aa30.47■■■□□ 2.47
SF1-214ENST00000477596 EYA1Q99502 592 aa30.46■■■□□ 2.47
SF1-214ENST00000477596 APBA3O96018 575 aa30.45■■■□□ 2.47
SF1-214ENST00000477596 RAPGEF4Q8WZA2 1011 aa30.44■■■□□ 2.46
SF1-214ENST00000477596 DDX54Q8TDD1 881 aaKnown RBP30.43■■■□□ 2.46
SF1-214ENST00000477596 NHSQ6T4R5 1651 aa30.42■■■□□ 2.46
SF1-214ENST00000477596 TATP17735 454 aaPredicted RBP30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms