RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 RBM6P78332 1123 aaKnown RBP17.94■□□□□ 0.46
TOP3A-205ENST00000477508 AMER1Q5JTC6 1135 aaPredicted RBP17.93■□□□□ 0.46
TOP3A-205ENST00000477508 LMO7Q8WWI1 1683 aa17.93■□□□□ 0.46
TOP3A-205ENST00000477508 NPC1L1Q9UHC9 1359 aa17.92■□□□□ 0.46
TOP3A-205ENST00000477508 GJD4Q96KN9 370 aaPredicted RBP17.92■□□□□ 0.46
TOP3A-205ENST00000477508 CAMTA1Q9Y6Y1 1673 aa17.92■□□□□ 0.46
TOP3A-205ENST00000477508 ANKRD26Q9UPS8 1709 aa17.92■□□□□ 0.46
TOP3A-205ENST00000477508 KIF24Q5T7B8 1368 aa17.91■□□□□ 0.46
TOP3A-205ENST00000477508 NRAPQ86VF7 1730 aa17.91■□□□□ 0.46
TOP3A-205ENST00000477508 COL18A1P39060 1754 aa17.91■□□□□ 0.46
TOP3A-205ENST00000477508 LTN1O94822 1766 aa17.9■□□□□ 0.46
TOP3A-205ENST00000477508 AMPHP49418 695 aa17.9■□□□□ 0.46
TOP3A-205ENST00000477508 MORC1Q86VD1 984 aa17.9■□□□□ 0.46
TOP3A-205ENST00000477508 IP6K1Q92551 441 aa17.9■□□□□ 0.46
TOP3A-205ENST00000477508 STRN4Q9NRL3 753 aa17.9■□□□□ 0.46
TOP3A-205ENST00000477508 CCDC9Q9Y3X0 531 aaKnown RBP17.9■□□□□ 0.46
TOP3A-205ENST00000477508 MAP3K19Q56UN5 1328 aa17.9■□□□□ 0.46
TOP3A-205ENST00000477508 COL5A2P05997 1499 aaPredicted RBP17.89■□□□□ 0.45
TOP3A-205ENST00000477508 CNKSR2Q8WXI2 1034 aa17.89■□□□□ 0.45
TOP3A-205ENST00000477508 RTL1A6NKG5 1358 aa17.89■□□□□ 0.45
TOP3A-205ENST00000477508 BLMP54132 1417 aaPredicted RBP17.89■□□□□ 0.45
TOP3A-205ENST00000477508 CDK12Q9NYV4 1490 aaPredicted RBP17.88■□□□□ 0.45
TOP3A-205ENST00000477508 AXIN2Q9Y2T1 843 aa17.88■□□□□ 0.45
TOP3A-205ENST00000477508 ZNF316A6NFI3 1004 aaPredicted RBP17.87■□□□□ 0.45
TOP3A-205ENST00000477508 RRS1Q15050 365 aaKnown RBP17.87■□□□□ 0.45
TOP3A-205ENST00000477508 SPATA31A5Q5VU36 1347 aa17.87■□□□□ 0.45
TOP3A-205ENST00000477508 SPATA31A7Q8IWB4 1347 aa17.87■□□□□ 0.45
TOP3A-205ENST00000477508 WDR17Q8IZU2 1322 aa17.86■□□□□ 0.45
TOP3A-205ENST00000477508 CSB-PGBD3P0DP91 1061 aa17.85■□□□□ 0.45
TOP3A-205ENST00000477508 FBLN1P23142 703 aa17.85■□□□□ 0.45
TOP3A-205ENST00000477508 HOXC9P31274 260 aa17.85■□□□□ 0.45
TOP3A-205ENST00000477508 CRB1P82279 1406 aa17.85■□□□□ 0.45
TOP3A-205ENST00000477508 SPATA31A1Q5TZJ5 1347 aa17.85■□□□□ 0.45
TOP3A-205ENST00000477508 LARP1Q6PKG0 1096 aaKnown RBP17.85■□□□□ 0.45
TOP3A-205ENST00000477508 THRAP3Q9Y2W1 955 aaKnown RBP17.85■□□□□ 0.45
TOP3A-205ENST00000477508 FLT4P35916 1363 aa17.84■□□□□ 0.45
TOP3A-205ENST00000477508 ERBB3P21860 1342 aa17.84■□□□□ 0.45
TOP3A-205ENST00000477508 ONECUT3O60422 494 aaPredicted RBP17.84■□□□□ 0.45
TOP3A-205ENST00000477508 DDX10Q13206 875 aaKnown RBP17.84■□□□□ 0.45
TOP3A-205ENST00000477508 CC2D1BQ5T0F9 858 aaKnown RBP17.84■□□□□ 0.45
TOP3A-205ENST00000477508 TOM1L2Q6ZVM7 507 aa17.84■□□□□ 0.45
TOP3A-205ENST00000477508 RGPD5Q99666 1765 aa17.84■□□□□ 0.45
TOP3A-205ENST00000477508 NPM3O75607 178 aaKnown RBP17.83■□□□□ 0.44
TOP3A-205ENST00000477508 TNNT2P45379 298 aaPredicted RBP17.83■□□□□ 0.44
TOP3A-205ENST00000477508 ANKRD24Q8TF21 1146 aa17.83■□□□□ 0.44
TOP3A-205ENST00000477508 CARD10Q9BWT7 1032 aa17.83■□□□□ 0.44
TOP3A-205ENST00000477508 POLKQ9UBT6 870 aa17.83■□□□□ 0.44
TOP3A-205ENST00000477508 MAP2P11137 1827 aaKnown RBP17.83■□□□□ 0.44
TOP3A-205ENST00000477508 GLI3P10071 1580 aa17.83■□□□□ 0.44
TOP3A-205ENST00000477508 INSRP06213 1382 aa17.82■□□□□ 0.44
TOP3A-205ENST00000477508 TCP11L2Q8N4U5 519 aa17.82■□□□□ 0.44
TOP3A-205ENST00000477508 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
TOP3A-205ENST00000477508 PPM1GO15355 546 aaPredicted RBP17.81■□□□□ 0.44
TOP3A-205ENST00000477508 BARGINQ6ZT62 677 aa17.81■□□□□ 0.44
TOP3A-205ENST00000477508 EMILIN1Q9Y6C2 1016 aa17.81■□□□□ 0.44
TOP3A-205ENST00000477508 FAM98CQ17RN3 349 aaKnown RBP17.79■□□□□ 0.44
TOP3A-205ENST00000477508 HSP90AB2PQ58FF8 381 aa17.79■□□□□ 0.44
TOP3A-205ENST00000477508 CDCA7Q9BWT1 371 aaPredicted RBP17.79■□□□□ 0.44
TOP3A-205ENST00000477508 NLRP2Q9NX02 1062 aa17.79■□□□□ 0.44
TOP3A-205ENST00000477508 USP35Q9P2H5 1018 aa17.79■□□□□ 0.44
TOP3A-205ENST00000477508 FAM208AQ9UK61 1670 aaKnown RBP17.79■□□□□ 0.44
TOP3A-205ENST00000477508 LTV1Q96GA3 475 aaPredicted RBP17.78■□□□□ 0.44
TOP3A-205ENST00000477508 RGS12O14924 1447 aa17.78■□□□□ 0.44
TOP3A-205ENST00000477508 SEPT12Q8IYM1 358 aa17.77■□□□□ 0.44
TOP3A-205ENST00000477508 PEAK1Q9H792 1746 aa17.77■□□□□ 0.44
TOP3A-205ENST00000477508 A0A0G2JS52 829 aa17.76■□□□□ 0.43
TOP3A-205ENST00000477508 MYT1Q01538 1121 aa17.76■□□□□ 0.43
TOP3A-205ENST00000477508 MTHFSP49914 203 aa17.75■□□□□ 0.43
TOP3A-205ENST00000477508 CNGB1Q14028 1251 aaPredicted RBP17.75■□□□□ 0.43
TOP3A-205ENST00000477508 THSD7AQ9UPZ6 1657 aa17.72■□□□□ 0.43
TOP3A-205ENST00000477508 RALBP1Q15311 655 aa17.72■□□□□ 0.43
TOP3A-205ENST00000477508 PARD3Q8TEW0 1356 aa17.71■□□□□ 0.43
TOP3A-205ENST00000477508 IL2RBP14784 551 aa17.71■□□□□ 0.43
TOP3A-205ENST00000477508 EIF4A2Q14240 407 aaKnown RBP17.71■□□□□ 0.43
TOP3A-205ENST00000477508 KRT27Q7Z3Y8 459 aa17.71■□□□□ 0.43
TOP3A-205ENST00000477508 PDE3BQ13370 1112 aa17.7■□□□□ 0.42
TOP3A-205ENST00000477508 NBPF6Q5VWK0 638 aa17.7■□□□□ 0.42
TOP3A-205ENST00000477508 NBPF4Q96M43 638 aa17.7■□□□□ 0.42
TOP3A-205ENST00000477508 CFAP53Q96M91 514 aa17.7■□□□□ 0.42
TOP3A-205ENST00000477508 PPP2R1AP30153 589 aa17.69■□□□□ 0.42
TOP3A-205ENST00000477508 DDB1Q16531 1140 aa17.69■□□□□ 0.42
TOP3A-205ENST00000477508 DISP2A7MBM2 1401 aa17.69■□□□□ 0.42
TOP3A-205ENST00000477508 PARP4Q9UKK3 1724 aaKnown RBP17.69■□□□□ 0.42
TOP3A-205ENST00000477508 EXOC5O00471 708 aa17.68■□□□□ 0.42
TOP3A-205ENST00000477508 RAPGEF4Q8WZA2 1011 aa17.68■□□□□ 0.42
TOP3A-205ENST00000477508 WNK3Q9BYP7 1800 aa17.68■□□□□ 0.42
TOP3A-205ENST00000477508 EYA1Q99502 592 aa17.67■□□□□ 0.42
TOP3A-205ENST00000477508 BRWD3Q6RI45 1802 aa17.67■□□□□ 0.42
TOP3A-205ENST00000477508 RGPD2P0DJD1 1756 aa17.66■□□□□ 0.42
TOP3A-205ENST00000477508 NCAPD2Q15021 1401 aa17.66■□□□□ 0.42
TOP3A-205ENST00000477508 DIAPH1O60610 1272 aaKnown RBP17.66■□□□□ 0.42
TOP3A-205ENST00000477508 IL13P35225 146 aa17.66■□□□□ 0.42
TOP3A-205ENST00000477508 TATP17735 454 aaPredicted RBP17.65■□□□□ 0.42
TOP3A-205ENST00000477508 IGSF1Q8N6C5 1336 aa17.65■□□□□ 0.42
TOP3A-205ENST00000477508 PLEKHG2Q9H7P9 1386 aa17.65■□□□□ 0.42
TOP3A-205ENST00000477508 USHBP1Q8N6Y0 703 aa17.64■□□□□ 0.41
TOP3A-205ENST00000477508 TNS2Q63HR2 1409 aa17.64■□□□□ 0.41
TOP3A-205ENST00000477508 FAM196AQ6ZSG2 479 aa17.63■□□□□ 0.41
TOP3A-205ENST00000477508 NUDCQ9Y266 331 aa17.63■□□□□ 0.41
TOP3A-205ENST00000477508 LRRC37A3O60309 1634 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms