RNA–Protein interactions for RNA: ENST00000477491.5

CRIM1-206, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 2

Gene CRIM1, Length 311 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-206ENST00000477491 ZNF521Q96K83 1311 aa8.66□□□□□ -1.02
CRIM1-206ENST00000477491 FOXO3O43524 673 aa8.66□□□□□ -1.02
CRIM1-206ENST00000477491 IL13P35225 146 aa8.66□□□□□ -1.02
CRIM1-206ENST00000477491 KRT28Q7Z3Y7 464 aa8.66□□□□□ -1.02
CRIM1-206ENST00000477491 IQSEC2Q5JU85 1478 aa8.65□□□□□ -1.02
CRIM1-206ENST00000477491 MAP3K19Q56UN5 1328 aa8.65□□□□□ -1.02
CRIM1-206ENST00000477491 ZNF335Q9H4Z2 1342 aaPredicted RBP8.65□□□□□ -1.02
CRIM1-206ENST00000477491 SENP3-EIF4A1A0A087X0R7 540 aa8.65□□□□□ -1.02
CRIM1-206ENST00000477491 SOX12O15370 315 aa8.65□□□□□ -1.02
CRIM1-206ENST00000477491 FBLN1P23142 703 aa8.65□□□□□ -1.02
CRIM1-206ENST00000477491 FKBP8Q14318 412 aa8.65□□□□□ -1.02
CRIM1-206ENST00000477491 WDR63Q8IWG1 891 aa8.65□□□□□ -1.02
CRIM1-206ENST00000477491 STRCQ7RTU9 1775 aa8.65□□□□□ -1.02
CRIM1-206ENST00000477491 RGPD8O14715 1765 aaPredicted RBP8.64□□□□□ -1.03
CRIM1-206ENST00000477491 PRKAR2BP31323 418 aa8.64□□□□□ -1.03
CRIM1-206ENST00000477491 CALD1Q05682 793 aaKnown RBP8.64□□□□□ -1.03
CRIM1-206ENST00000477491 SLFN5Q08AF3 891 aa8.64□□□□□ -1.03
CRIM1-206ENST00000477491 LMOD3Q0VAK6 560 aa8.64□□□□□ -1.03
CRIM1-206ENST00000477491 NEUROD2Q15784 382 aa8.64□□□□□ -1.03
CRIM1-206ENST00000477491 WWC1Q8IX03 1113 aa8.64□□□□□ -1.03
CRIM1-206ENST00000477491 PLEKHF1Q96S99 279 aa8.64□□□□□ -1.03
CRIM1-206ENST00000477491 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
CRIM1-206ENST00000477491 MYH16Q9H6N6 1097 aa8.64□□□□□ -1.03
CRIM1-206ENST00000477491 RCAN3Q9UKA8 241 aa8.64□□□□□ -1.03
CRIM1-206ENST00000477491 PIK3C2AO00443 1686 aa8.64□□□□□ -1.03
CRIM1-206ENST00000477491 USP54Q70EL1 1684 aa8.64□□□□□ -1.03
CRIM1-206ENST00000477491 ARHGEF10O15013 1369 aa8.63□□□□□ -1.03
CRIM1-206ENST00000477491 TMPOP42166 694 aaKnown RBP8.63□□□□□ -1.03
CRIM1-206ENST00000477491 EIF4A2Q14240 407 aaKnown RBP8.63□□□□□ -1.03
CRIM1-206ENST00000477491 NUTM2GQ5VZR2 741 aa8.63□□□□□ -1.03
CRIM1-206ENST00000477491 LMOD2Q6P5Q4 547 aa8.63□□□□□ -1.03
CRIM1-206ENST00000477491 PELP1Q8IZL8 1130 aaKnown RBP8.63□□□□□ -1.03
CRIM1-206ENST00000477491 CDCA7LQ96GN5 454 aa8.63□□□□□ -1.03
CRIM1-206ENST00000477491 MAP2P11137 1827 aaKnown RBP8.62□□□□□ -1.03
CRIM1-206ENST00000477491 HMOX1P09601 288 aa8.62□□□□□ -1.03
CRIM1-206ENST00000477491 HOXC9P31274 260 aa8.62□□□□□ -1.03
CRIM1-206ENST00000477491 RIPK4P57078 832 aa8.62□□□□□ -1.03
CRIM1-206ENST00000477491 HSP90AB2PQ58FF8 381 aa8.62□□□□□ -1.03
CRIM1-206ENST00000477491 DUSP27Q5VZP5 1158 aa8.62□□□□□ -1.03
CRIM1-206ENST00000477491 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.62□□□□□ -1.03
CRIM1-206ENST00000477491 RRP7AQ9Y3A4 280 aaKnown RBP8.62□□□□□ -1.03
CRIM1-206ENST00000477491 STRCP1A6NGW2 1772 aa8.62□□□□□ -1.03
CRIM1-206ENST00000477491 USP19O94966 1318 aa8.61□□□□□ -1.03
CRIM1-206ENST00000477491 IL16Q14005 1332 aa8.61□□□□□ -1.03
CRIM1-206ENST00000477491 XPCQ01831 940 aaPredicted RBP8.61□□□□□ -1.03
CRIM1-206ENST00000477491 NFE2L2Q16236 605 aa8.61□□□□□ -1.03
CRIM1-206ENST00000477491 TRMT2AQ8IZ69 625 aaKnown RBP8.61□□□□□ -1.03
CRIM1-206ENST00000477491 IP6K1Q92551 441 aa8.61□□□□□ -1.03
CRIM1-206ENST00000477491 SLAIN2Q9P270 581 aa8.61□□□□□ -1.03
CRIM1-206ENST00000477491 TNS3Q68CZ2 1445 aa8.61□□□□□ -1.03
CRIM1-206ENST00000477491 SLIT3O75094 1523 aa8.6□□□□□ -1.03
CRIM1-206ENST00000477491 RNF123Q5XPI4 1314 aa8.6□□□□□ -1.03
CRIM1-206ENST00000477491 GCP02774 474 aa8.6□□□□□ -1.03
CRIM1-206ENST00000477491 CT47B1P0C2W7 299 aaPredicted RBP8.6□□□□□ -1.03
CRIM1-206ENST00000477491 SULT6B1Q6IMI4 303 aa8.6□□□□□ -1.03
CRIM1-206ENST00000477491 BRINP3Q76B58 766 aa8.6□□□□□ -1.03
CRIM1-206ENST00000477491 IGSF1Q8N6C5 1336 aa8.59□□□□□ -1.03
CRIM1-206ENST00000477491 RRP1P56182 461 aaKnown RBP8.59□□□□□ -1.03
CRIM1-206ENST00000477491 GAS2L2Q8NHY3 880 aa8.59□□□□□ -1.03
CRIM1-206ENST00000477491 NFAT5O94916 1531 aa8.59□□□□□ -1.03
CRIM1-206ENST00000477491 SPATA31A3Q5VYP0 1347 aa8.58□□□□□ -1.04
CRIM1-206ENST00000477491 ZBTB7CA1YPR0 619 aa8.58□□□□□ -1.04
CRIM1-206ENST00000477491 MKRN4PQ13434 485 aaPredicted RBP8.58□□□□□ -1.04
CRIM1-206ENST00000477491 ARHGEF25Q86VW2 580 aa8.58□□□□□ -1.04
CRIM1-206ENST00000477491 KDRP35968 1356 aa8.58□□□□□ -1.04
CRIM1-206ENST00000477491 PEAK1Q9H792 1746 aa8.57□□□□□ -1.04
CRIM1-206ENST00000477491 TRPM3Q9HCF6 1732 aaPredicted RBP8.57□□□□□ -1.04
CRIM1-206ENST00000477491 SOS2Q07890 1332 aaPredicted RBP8.57□□□□□ -1.04
CRIM1-206ENST00000477491 SPDYE2BA6NHP3 402 aa8.57□□□□□ -1.04
CRIM1-206ENST00000477491 SPDYE6P0CI01 402 aa8.57□□□□□ -1.04
CRIM1-206ENST00000477491 GNAI1P63096 354 aa8.57□□□□□ -1.04
CRIM1-206ENST00000477491 SPDYE2Q495Y8 402 aa8.57□□□□□ -1.04
CRIM1-206ENST00000477491 PHACTR3Q96KR7 559 aa8.57□□□□□ -1.04
CRIM1-206ENST00000477491 EYA1Q99502 592 aa8.57□□□□□ -1.04
CRIM1-206ENST00000477491 TRIM35Q9UPQ4 493 aa8.57□□□□□ -1.04
CRIM1-206ENST00000477491 PXDNQ92626 1479 aa8.57□□□□□ -1.04
CRIM1-206ENST00000477491 AEBP1Q8IUX7 1158 aa8.56□□□□□ -1.04
CRIM1-206ENST00000477491 RTF1Q92541 710 aaKnown RBP8.56□□□□□ -1.04
CRIM1-206ENST00000477491 LTV1Q96GA3 475 aaPredicted RBP8.56□□□□□ -1.04
CRIM1-206ENST00000477491 IFT57Q9NWB7 429 aa8.56□□□□□ -1.04
CRIM1-206ENST00000477491 PPP4R2Q9NY27 417 aa8.56□□□□□ -1.04
CRIM1-206ENST00000477491 PHRF1Q9P1Y6 1649 aaKnown RBP8.55□□□□□ -1.04
CRIM1-206ENST00000477491 MARF1Q9Y4F3 1742 aaKnown RBP8.55□□□□□ -1.04
CRIM1-206ENST00000477491 HTATSF1O43719 755 aaKnown RBP8.55□□□□□ -1.04
CRIM1-206ENST00000477491 HAP1P54257 671 aaPredicted RBP8.55□□□□□ -1.04
CRIM1-206ENST00000477491 IRX6P78412 446 aaPredicted RBP8.55□□□□□ -1.04
CRIM1-206ENST00000477491 ZNF428Q96B54 188 aa8.55□□□□□ -1.04
CRIM1-206ENST00000477491 MED1Q15648 1581 aaPredicted RBP8.55□□□□□ -1.04
CRIM1-206ENST00000477491 ALS2Q96Q42 1657 aa8.55□□□□□ -1.04
CRIM1-206ENST00000477491 FANCIQ9NVI1 1328 aa8.54□□□□□ -1.04
CRIM1-206ENST00000477491 ABCC6O95255 1503 aa8.54□□□□□ -1.04
CRIM1-206ENST00000477491 RGPD1P0DJD0 1748 aa8.54□□□□□ -1.04
CRIM1-206ENST00000477491 XIRP1Q702N8 1843 aaKnown RBP8.54□□□□□ -1.04
CRIM1-206ENST00000477491 CPDO75976 1380 aa8.54□□□□□ -1.04
CRIM1-206ENST00000477491 CANXP27824 592 aaKnown RBP8.54□□□□□ -1.04
CRIM1-206ENST00000477491 ANKRD24Q8TF21 1146 aa8.54□□□□□ -1.04
CRIM1-206ENST00000477491 DDX17Q92841 729 aaKnown RBP8.54□□□□□ -1.04
CRIM1-206ENST00000477491 PLEKHG2Q9H7P9 1386 aa8.53□□□□□ -1.04
CRIM1-206ENST00000477491 PLEKHG5O94827 1062 aa8.53□□□□□ -1.04
CRIM1-206ENST00000477491 MS4A1P11836 297 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms