RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 NEXNQ0ZGT2 675 aa13.48□□□□□ -0.25
COL27A1-204ENST00000477421 ALDH1L2Q3SY69 923 aa13.47□□□□□ -0.25
COL27A1-204ENST00000477421 RIC3Q7Z5B4 369 aa13.47□□□□□ -0.25
COL27A1-204ENST00000477421 TTC37Q6PGP7 1564 aa13.47□□□□□ -0.25
COL27A1-204ENST00000477421 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.47□□□□□ -0.25
COL27A1-204ENST00000477421 PROSER2Q86WR7 435 aaPredicted RBP13.47□□□□□ -0.25
COL27A1-204ENST00000477421 MAST1Q9Y2H9 1570 aa13.47□□□□□ -0.25
COL27A1-204ENST00000477421 ATP7AQ04656 1500 aa13.46□□□□□ -0.25
COL27A1-204ENST00000477421 ANXA1P04083 346 aa13.46□□□□□ -0.25
COL27A1-204ENST00000477421 ABCC11Q96J66 1382 aa13.46□□□□□ -0.25
COL27A1-204ENST00000477421 ATP10AO60312 1499 aa13.46□□□□□ -0.25
COL27A1-204ENST00000477421 MCM4P33991 863 aa13.46□□□□□ -0.25
COL27A1-204ENST00000477421 SIL1Q9H173 461 aa13.46□□□□□ -0.25
COL27A1-204ENST00000477421 HDAC5Q9UQL6 1122 aa13.46□□□□□ -0.25
COL27A1-204ENST00000477421 LRRIQ1Q96JM4 1722 aa13.46□□□□□ -0.26
COL27A1-204ENST00000477421 G3BP1Q13283 466 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL27A1-204ENST00000477421 BCORL1Q5H9F3 1711 aa13.45□□□□□ -0.26
COL27A1-204ENST00000477421 PTPRTO14522 1441 aa13.45□□□□□ -0.26
COL27A1-204ENST00000477421 NPATQ14207 1427 aa13.45□□□□□ -0.26
COL27A1-204ENST00000477421 NSD2O96028 1365 aa13.45□□□□□ -0.26
COL27A1-204ENST00000477421 EIF2AK4Q9P2K8 1649 aaKnown RBP13.45□□□□□ -0.26
COL27A1-204ENST00000477421 SRGAP3O43295 1099 aa13.45□□□□□ -0.26
COL27A1-204ENST00000477421 RNF214Q8ND24 703 aa13.45□□□□□ -0.26
COL27A1-204ENST00000477421 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
COL27A1-204ENST00000477421 DRC7Q8IY82 874 aa13.44□□□□□ -0.26
COL27A1-204ENST00000477421 C16orf71Q8IYS4 520 aaPredicted RBP13.44□□□□□ -0.26
COL27A1-204ENST00000477421 KDM2BQ8NHM5 1336 aa13.44□□□□□ -0.26
COL27A1-204ENST00000477421 ADGBQ8N7X0 1667 aa13.44□□□□□ -0.26
COL27A1-204ENST00000477421 MYL6BP14649 208 aa13.44□□□□□ -0.26
COL27A1-204ENST00000477421 CCDC27Q2M243 656 aa13.44□□□□□ -0.26
COL27A1-204ENST00000477421 CAVIN1Q6NZI2 390 aaKnown RBP13.44□□□□□ -0.26
COL27A1-204ENST00000477421 NUTM1Q86Y26 1132 aa13.44□□□□□ -0.26
COL27A1-204ENST00000477421 SYTL4Q96C24 671 aaPredicted RBP13.44□□□□□ -0.26
COL27A1-204ENST00000477421 TBC1D32Q96NH3 1257 aa13.44□□□□□ -0.26
COL27A1-204ENST00000477421 MEIS3Q99687 375 aa13.44□□□□□ -0.26
COL27A1-204ENST00000477421 UPF3BQ9BZI7 483 aaKnown RBP13.44□□□□□ -0.26
COL27A1-204ENST00000477421 LRRCC1Q9C099 1032 aa13.44□□□□□ -0.26
COL27A1-204ENST00000477421 PTMSP20962 102 aa13.44□□□□□ -0.26
COL27A1-204ENST00000477421 VPS37CA5D8V6 355 aaPredicted RBP13.43□□□□□ -0.26
COL27A1-204ENST00000477421 ATF3P18847 181 aa13.43□□□□□ -0.26
COL27A1-204ENST00000477421 CCT4P50991 539 aaKnown RBP13.43□□□□□ -0.26
COL27A1-204ENST00000477421 CLASRPQ8N2M8 674 aaKnown RBP13.43□□□□□ -0.26
COL27A1-204ENST00000477421 SRCIN1Q9C0H9 1055 aa13.43□□□□□ -0.26
COL27A1-204ENST00000477421 GNAT3A8MTJ3 354 aa13.43□□□□□ -0.26
COL27A1-204ENST00000477421 K7ELQ4 463 aaPredicted RBP13.43□□□□□ -0.26
COL27A1-204ENST00000477421 VAMP4O75379 141 aa13.43□□□□□ -0.26
COL27A1-204ENST00000477421 PRPF40AO75400 957 aaKnown RBP13.43□□□□□ -0.26
COL27A1-204ENST00000477421 EIF4A2Q14240 407 aaKnown RBP13.43□□□□□ -0.26
COL27A1-204ENST00000477421 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
COL27A1-204ENST00000477421 ARHGEF5Q12774 1597 aa13.43□□□□□ -0.26
COL27A1-204ENST00000477421 DDX58O95786 925 aaKnown RBP13.43□□□□□ -0.26
COL27A1-204ENST00000477421 MPRIPQ6WCQ1 1025 aa13.43□□□□□ -0.26
COL27A1-204ENST00000477421 RPAP2Q8IXW5 612 aaPredicted RBP13.43□□□□□ -0.26
COL27A1-204ENST00000477421 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
COL27A1-204ENST00000477421 BLMP54132 1417 aaPredicted RBP13.43□□□□□ -0.26
COL27A1-204ENST00000477421 EVA1CP58658 441 aa13.42□□□□□ -0.26
COL27A1-204ENST00000477421 SKOR2Q2VWA4 1001 aaPredicted RBP13.42□□□□□ -0.26
COL27A1-204ENST00000477421 TBC1D9Q6ZT07 1266 aa13.42□□□□□ -0.26
COL27A1-204ENST00000477421 NEUROD6Q96NK8 337 aa13.42□□□□□ -0.26
COL27A1-204ENST00000477421 FOSBP53539 338 aa13.42□□□□□ -0.26
COL27A1-204ENST00000477421 NUCB2P80303 420 aa13.42□□□□□ -0.26
COL27A1-204ENST00000477421 GLIPR1L2Q4G1C9 344 aa13.42□□□□□ -0.26
COL27A1-204ENST00000477421 PLEKHO1Q53GL0 409 aaPredicted RBP13.42□□□□□ -0.26
COL27A1-204ENST00000477421 TTC21BQ7Z4L5 1316 aa13.41□□□□□ -0.26
COL27A1-204ENST00000477421 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
COL27A1-204ENST00000477421 DDX54Q8TDD1 881 aaKnown RBP13.41□□□□□ -0.26
COL27A1-204ENST00000477421 SYAP1Q96A49 352 aaPredicted RBP13.41□□□□□ -0.26
COL27A1-204ENST00000477421 PPIP5K1Q6PFW1 1433 aa13.41□□□□□ -0.26
COL27A1-204ENST00000477421 ZKSCAN1P17029 563 aaPredicted RBP13.41□□□□□ -0.26
COL27A1-204ENST00000477421 RABEP1Q15276 862 aa13.41□□□□□ -0.26
COL27A1-204ENST00000477421 ERC2O15083 957 aa13.41□□□□□ -0.26
COL27A1-204ENST00000477421 NPC1L1Q9UHC9 1359 aa13.41□□□□□ -0.26
COL27A1-204ENST00000477421 RSPH6AQ9H0K4 717 aa13.4□□□□□ -0.26
COL27A1-204ENST00000477421 ZMYM4Q5VZL5 1548 aa13.4□□□□□ -0.26
COL27A1-204ENST00000477421 ZBTB22O15209 634 aa13.4□□□□□ -0.26
COL27A1-204ENST00000477421 ZBTB40Q9NUA8 1239 aa13.4□□□□□ -0.26
COL27A1-204ENST00000477421 BTBD11A6QL63 1104 aa13.4□□□□□ -0.26
COL27A1-204ENST00000477421 MPNDQ8N594 471 aa13.4□□□□□ -0.26
COL27A1-204ENST00000477421 RUFY2Q8WXA3 655 aa13.4□□□□□ -0.26
COL27A1-204ENST00000477421 YTHDC2Q9H6S0 1430 aaKnown RBP13.4□□□□□ -0.26
COL27A1-204ENST00000477421 HDAC1Q13547 482 aaPredicted RBP13.39□□□□□ -0.27
COL27A1-204ENST00000477421 LARP6Q9BRS8 491 aaKnown RBP13.39□□□□□ -0.27
COL27A1-204ENST00000477421 LRRFIP2Q9Y608 721 aaKnown RBP13.39□□□□□ -0.27
COL27A1-204ENST00000477421 TAF7Q15545 349 aaPredicted RBP13.39□□□□□ -0.27
COL27A1-204ENST00000477421 RIMS2Q9UQ26 1411 aa13.39□□□□□ -0.27
COL27A1-204ENST00000477421 IL16Q14005 1332 aa13.39□□□□□ -0.27
COL27A1-204ENST00000477421 FLIIQ13045 1269 aa13.39□□□□□ -0.27
COL27A1-204ENST00000477421 MRPL50Q8N5N7 158 aaKnown RBP13.39□□□□□ -0.27
COL27A1-204ENST00000477421 CDC42BPAQ5VT25 1732 aa13.39□□□□□ -0.27
COL27A1-204ENST00000477421 NUCB1Q02818 461 aa13.39□□□□□ -0.27
COL27A1-204ENST00000477421 CWC27Q6UX04 472 aaKnown RBP13.39□□□□□ -0.27
COL27A1-204ENST00000477421 TOMM22Q9NS69 142 aa13.39□□□□□ -0.27
COL27A1-204ENST00000477421 PHF8Q9UPP1 1060 aa13.39□□□□□ -0.27
COL27A1-204ENST00000477421 SMC3Q9UQE7 1217 aa13.38□□□□□ -0.27
COL27A1-204ENST00000477421 ZNF521Q96K83 1311 aa13.38□□□□□ -0.27
COL27A1-204ENST00000477421 GNL2Q13823 731 aaKnown RBP13.38□□□□□ -0.27
COL27A1-204ENST00000477421 YEATS2Q9ULM3 1422 aa13.38□□□□□ -0.27
COL27A1-204ENST00000477421 KDM5DQ9BY66 1539 aa13.37□□□□□ -0.27
COL27A1-204ENST00000477421 ERVK-7P63135 1459 aa13.37□□□□□ -0.27
COL27A1-204ENST00000477421 HSP90AB4PQ58FF6 505 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms