RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 PLEKHG5O94827 1062 aa19.06■□□□□ 0.64
COL4A6-206ENST00000477085 GCP02774 474 aa19.06■□□□□ 0.64
COL4A6-206ENST00000477085 SLIT3O75094 1523 aa19.06■□□□□ 0.64
COL4A6-206ENST00000477085 TMPOP42166 694 aaKnown RBP19.05■□□□□ 0.64
COL4A6-206ENST00000477085 GOLGA2Q08379 1002 aa19.05■□□□□ 0.64
COL4A6-206ENST00000477085 TRMT2AQ8IZ69 625 aaKnown RBP19.05■□□□□ 0.64
COL4A6-206ENST00000477085 SLFN5Q08AF3 891 aa19.04■□□□□ 0.64
COL4A6-206ENST00000477085 AEBP1Q8IUX7 1158 aa19.04■□□□□ 0.64
COL4A6-206ENST00000477085 KCNH5Q8NCM2 988 aa19.04■□□□□ 0.64
COL4A6-206ENST00000477085 KIF24Q5T7B8 1368 aa19.04■□□□□ 0.64
COL4A6-206ENST00000477085 CCDC27Q2M243 656 aa19.04■□□□□ 0.64
COL4A6-206ENST00000477085 DUSP27Q5VZP5 1158 aa19.04■□□□□ 0.64
COL4A6-206ENST00000477085 RGPD1P0DJD0 1748 aa19.03■□□□□ 0.64
COL4A6-206ENST00000477085 MED1Q15648 1581 aaPredicted RBP19.03■□□□□ 0.64
COL4A6-206ENST00000477085 NCBP3Q53F19 620 aaKnown RBP19.03■□□□□ 0.64
COL4A6-206ENST00000477085 TRIM35Q9UPQ4 493 aa19.03■□□□□ 0.64
COL4A6-206ENST00000477085 SPATA31A3Q5VYP0 1347 aa19.02■□□□□ 0.64
COL4A6-206ENST00000477085 SULT6B1Q6IMI4 303 aa19.01■□□□□ 0.63
COL4A6-206ENST00000477085 ARHGEF25Q86VW2 580 aa19.01■□□□□ 0.63
COL4A6-206ENST00000477085 IP6K1Q92551 441 aa19.01■□□□□ 0.63
COL4A6-206ENST00000477085 PNNQ9H307 717 aaKnown RBP19.01■□□□□ 0.63
COL4A6-206ENST00000477085 MAPK8IP3Q9UPT6 1336 aa19.01■□□□□ 0.63
COL4A6-206ENST00000477085 EYA1Q99502 592 aa19.01■□□□□ 0.63
COL4A6-206ENST00000477085 TNS3Q68CZ2 1445 aa19■□□□□ 0.63
COL4A6-206ENST00000477085 SOS2Q07890 1332 aaPredicted RBP19■□□□□ 0.63
COL4A6-206ENST00000477085 LTN1O94822 1766 aa18.99■□□□□ 0.63
COL4A6-206ENST00000477085 CABLES1Q8TDN4 633 aa18.99■□□□□ 0.63
COL4A6-206ENST00000477085 RTL1A6NKG5 1358 aa18.99■□□□□ 0.63
COL4A6-206ENST00000477085 RIPK4P57078 832 aa18.98■□□□□ 0.63
COL4A6-206ENST00000477085 FKBP8Q14318 412 aa18.98■□□□□ 0.63
COL4A6-206ENST00000477085 WDR63Q8IWG1 891 aa18.98■□□□□ 0.63
COL4A6-206ENST00000477085 RNF123Q5XPI4 1314 aa18.97■□□□□ 0.63
COL4A6-206ENST00000477085 IGSF1Q8N6C5 1336 aa18.97■□□□□ 0.63
COL4A6-206ENST00000477085 ZBTB7CA1YPR0 619 aa18.97■□□□□ 0.63
COL4A6-206ENST00000477085 LTV1Q96GA3 475 aaPredicted RBP18.97■□□□□ 0.63
COL4A6-206ENST00000477085 ARHGEF10O15013 1369 aa18.97■□□□□ 0.63
COL4A6-206ENST00000477085 PHRF1Q9P1Y6 1649 aaKnown RBP18.97■□□□□ 0.63
COL4A6-206ENST00000477085 E9PSI1 815 aa18.96■□□□□ 0.63
COL4A6-206ENST00000477085 NFE2L2Q16236 605 aa18.96■□□□□ 0.63
COL4A6-206ENST00000477085 AXIN2Q9Y2T1 843 aa18.96■□□□□ 0.63
COL4A6-206ENST00000477085 KDRP35968 1356 aa18.96■□□□□ 0.63
COL4A6-206ENST00000477085 ZC3H6P61129 1189 aaKnown RBP18.96■□□□□ 0.63
COL4A6-206ENST00000477085 IRX6P78412 446 aaPredicted RBP18.95■□□□□ 0.62
COL4A6-206ENST00000477085 RCAN3Q9UKA8 241 aa18.95■□□□□ 0.62
COL4A6-206ENST00000477085 CRYBG1Q9Y4K1 1723 aa18.93■□□□□ 0.62
COL4A6-206ENST00000477085 NHSL1Q5SYE7 1610 aa18.93■□□□□ 0.62
COL4A6-206ENST00000477085 NBPF6Q5VWK0 638 aa18.92■□□□□ 0.62
COL4A6-206ENST00000477085 NBPF4Q96M43 638 aa18.92■□□□□ 0.62
COL4A6-206ENST00000477085 NEFMP07197 916 aa18.91■□□□□ 0.62
COL4A6-206ENST00000477085 USHBP1Q8N6Y0 703 aa18.91■□□□□ 0.62
COL4A6-206ENST00000477085 LRRC59Q96AG4 307 aaKnown RBP18.9■□□□□ 0.62
COL4A6-206ENST00000477085 THUMPD2Q9BTF0 503 aaKnown RBP18.9■□□□□ 0.62
COL4A6-206ENST00000477085 NEFLP07196 543 aa18.89■□□□□ 0.61
COL4A6-206ENST00000477085 FAM83GA6ND36 823 aa18.88■□□□□ 0.61
COL4A6-206ENST00000477085 ANKRD24Q8TF21 1146 aa18.88■□□□□ 0.61
COL4A6-206ENST00000477085 ROBO1Q9Y6N7 1651 aa18.88■□□□□ 0.61
COL4A6-206ENST00000477085 MTHFSDQ2M296 383 aaKnown RBP18.88■□□□□ 0.61
COL4A6-206ENST00000477085 CHRNA2Q15822 529 aa18.87■□□□□ 0.61
COL4A6-206ENST00000477085 TSR2Q969E8 191 aaKnown RBP18.87■□□□□ 0.61
COL4A6-206ENST00000477085 IL16Q14005 1332 aa18.87■□□□□ 0.61
COL4A6-206ENST00000477085 COL18A1P39060 1754 aa18.87■□□□□ 0.61
COL4A6-206ENST00000477085 KIAA0232Q92628 1395 aa18.86■□□□□ 0.61
COL4A6-206ENST00000477085 DCTN1Q14203 1278 aa18.86■□□□□ 0.61
COL4A6-206ENST00000477085 CPDO75976 1380 aa18.86■□□□□ 0.61
COL4A6-206ENST00000477085 RRP1P56182 461 aaKnown RBP18.86■□□□□ 0.61
COL4A6-206ENST00000477085 RGPD2P0DJD1 1756 aa18.85■□□□□ 0.61
COL4A6-206ENST00000477085 DLG5Q8TDM6 1919 aa18.85■□□□□ 0.61
COL4A6-206ENST00000477085 FANCIQ9NVI1 1328 aa18.85■□□□□ 0.61
COL4A6-206ENST00000477085 RGPD5Q99666 1765 aa18.84■□□□□ 0.61
COL4A6-206ENST00000477085 ERBB3P21860 1342 aa18.84■□□□□ 0.61
COL4A6-206ENST00000477085 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
COL4A6-206ENST00000477085 MYH16Q9H6N6 1097 aa18.84■□□□□ 0.61
COL4A6-206ENST00000477085 NCAPD2Q15021 1401 aa18.84■□□□□ 0.61
COL4A6-206ENST00000477085 PLIN1O60240 522 aa18.83■□□□□ 0.6
COL4A6-206ENST00000477085 AHDC1Q5TGY3 1603 aaPredicted RBP18.82■□□□□ 0.6
COL4A6-206ENST00000477085 ZNF853P0CG23 659 aa18.82■□□□□ 0.6
COL4A6-206ENST00000477085 MCM10Q7L590 875 aa18.82■□□□□ 0.6
COL4A6-206ENST00000477085 LMOD3Q0VAK6 560 aa18.81■□□□□ 0.6
COL4A6-206ENST00000477085 ABCA3Q99758 1704 aa18.8■□□□□ 0.6
COL4A6-206ENST00000477085 BCAR3O75815 825 aa18.8■□□□□ 0.6
COL4A6-206ENST00000477085 CAMTA1Q9Y6Y1 1673 aa18.8■□□□□ 0.6
COL4A6-206ENST00000477085 LMO7Q8WWI1 1683 aa18.79■□□□□ 0.6
COL4A6-206ENST00000477085 EXOSC9Q06265 439 aaKnown RBP18.79■□□□□ 0.6
COL4A6-206ENST00000477085 GAS2L2Q8NHY3 880 aa18.79■□□□□ 0.6
COL4A6-206ENST00000477085 LAS1LQ9Y4W2 734 aaKnown RBP18.79■□□□□ 0.6
COL4A6-206ENST00000477085 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
COL4A6-206ENST00000477085 ABCC6O95255 1503 aa18.78■□□□□ 0.6
COL4A6-206ENST00000477085 TOM1O60784 492 aa18.77■□□□□ 0.6
COL4A6-206ENST00000477085 PIP4K2BP78356 416 aa18.77■□□□□ 0.6
COL4A6-206ENST00000477085 CFAP44Q96MT7 982 aa18.77■□□□□ 0.6
COL4A6-206ENST00000477085 PRDM11Q9NQV5 511 aa18.77■□□□□ 0.6
COL4A6-206ENST00000477085 MBIPQ9NS73 344 aa18.77■□□□□ 0.6
COL4A6-206ENST00000477085 CRB1P82279 1406 aa18.77■□□□□ 0.59
COL4A6-206ENST00000477085 RARSP54136 660 aaKnown RBP18.76■□□□□ 0.59
COL4A6-206ENST00000477085 CALD1Q05682 793 aaKnown RBP18.76■□□□□ 0.59
COL4A6-206ENST00000477085 HAP1P54257 671 aaPredicted RBP18.76■□□□□ 0.59
COL4A6-206ENST00000477085 C20orf194Q5TEA3 1177 aa18.76■□□□□ 0.59
COL4A6-206ENST00000477085 NLRP2Q9NX02 1062 aa18.76■□□□□ 0.59
COL4A6-206ENST00000477085 GNAI1P63096 354 aa18.75■□□□□ 0.59
COL4A6-206ENST00000477085 ERICH6BQ5W0A0 696 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms