RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 USP35Q9P2H5 1018 aa24.22■■□□□ 1.47
SREBF1-211ENST00000476994 CPDO75976 1380 aa24.2■■□□□ 1.46
SREBF1-211ENST00000476994 AMER1Q5JTC6 1135 aaPredicted RBP24.2■■□□□ 1.46
SREBF1-211ENST00000476994 NPC1L1Q9UHC9 1359 aa24.19■■□□□ 1.46
SREBF1-211ENST00000476994 USP19O94966 1318 aa24.19■■□□□ 1.46
SREBF1-211ENST00000476994 TTC21BQ7Z4L5 1316 aa24.19■■□□□ 1.46
SREBF1-211ENST00000476994 FAM182BQ5T319 152 aa24.19■■□□□ 1.46
SREBF1-211ENST00000476994 FAM196AQ6ZSG2 479 aa24.19■■□□□ 1.46
SREBF1-211ENST00000476994 GCP02774 474 aa24.18■■□□□ 1.46
SREBF1-211ENST00000476994 PDE3BQ13370 1112 aa24.18■■□□□ 1.46
SREBF1-211ENST00000476994 TNS1Q9HBL0 1735 aaKnown RBP24.18■■□□□ 1.46
SREBF1-211ENST00000476994 BARGINQ6ZT62 677 aa24.17■■□□□ 1.46
SREBF1-211ENST00000476994 LMO7Q8WWI1 1683 aa24.17■■□□□ 1.46
SREBF1-211ENST00000476994 CAMTA1Q9Y6Y1 1673 aa24.16■■□□□ 1.46
SREBF1-211ENST00000476994 EN1Q05925 392 aaPredicted RBP24.16■■□□□ 1.46
SREBF1-211ENST00000476994 TTC21AQ8NDW8 1320 aa24.15■■□□□ 1.46
SREBF1-211ENST00000476994 ZBTB7CA1YPR0 619 aa24.15■■□□□ 1.46
SREBF1-211ENST00000476994 NLRP6P59044 892 aa24.15■■□□□ 1.46
SREBF1-211ENST00000476994 TCP11L2Q8N4U5 519 aa24.15■■□□□ 1.46
SREBF1-211ENST00000476994 KNSTRNQ9Y448 316 aa24.15■■□□□ 1.46
SREBF1-211ENST00000476994 OVOS2A0A0J9YW53 1432 aa24.14■■□□□ 1.45
SREBF1-211ENST00000476994 OVOS2Q6IE36 1432 aa24.14■■□□□ 1.45
SREBF1-211ENST00000476994 THRAP3Q9Y2W1 955 aaKnown RBP24.14■■□□□ 1.45
SREBF1-211ENST00000476994 DISP2A7MBM2 1401 aa24.13■■□□□ 1.45
SREBF1-211ENST00000476994 LARP1Q6PKG0 1096 aaKnown RBP24.13■■□□□ 1.45
SREBF1-211ENST00000476994 NSD2O96028 1365 aa24.13■■□□□ 1.45
SREBF1-211ENST00000476994 CGNL1Q0VF96 1302 aa24.12■■□□□ 1.45
SREBF1-211ENST00000476994 FYB1O15117 783 aa24.12■■□□□ 1.45
SREBF1-211ENST00000476994 LRP5O75197 1615 aa24.12■■□□□ 1.45
SREBF1-211ENST00000476994 USP31Q70CQ4 1352 aa24.12■■□□□ 1.45
SREBF1-211ENST00000476994 TRIM37O94972 964 aa24.11■■□□□ 1.45
SREBF1-211ENST00000476994 NME9Q86XW9 330 aa24.11■■□□□ 1.45
SREBF1-211ENST00000476994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.11■■□□□ 1.45
SREBF1-211ENST00000476994 PSDA5PKW4 1024 aaPredicted RBP24.1■■□□□ 1.45
SREBF1-211ENST00000476994 COL5A2P05997 1499 aaPredicted RBP24.1■■□□□ 1.45
SREBF1-211ENST00000476994 PARP4Q9UKK3 1724 aaKnown RBP24.1■■□□□ 1.45
SREBF1-211ENST00000476994 DIEXFQ68CQ4 756 aaKnown RBP24.09■■□□□ 1.45
SREBF1-211ENST00000476994 SLIT3O75094 1523 aa24.08■■□□□ 1.45
SREBF1-211ENST00000476994 CRB1P82279 1406 aa24.08■■□□□ 1.44
SREBF1-211ENST00000476994 MAP2P11137 1827 aaKnown RBP24.07■■□□□ 1.44
SREBF1-211ENST00000476994 AATKQ6ZMQ8 1374 aa24.07■■□□□ 1.44
SREBF1-211ENST00000476994 PARD3Q8TEW0 1356 aa24.07■■□□□ 1.44
SREBF1-211ENST00000476994 APBA3O96018 575 aa24.07■■□□□ 1.44
SREBF1-211ENST00000476994 KCNH5Q8NCM2 988 aa24.06■■□□□ 1.44
SREBF1-211ENST00000476994 GGNBP2Q9H3C7 697 aa24.06■■□□□ 1.44
SREBF1-211ENST00000476994 EZH2Q15910 746 aaKnown RBP24.05■■□□□ 1.44
SREBF1-211ENST00000476994 CC2D1BQ5T0F9 858 aaKnown RBP24.04■■□□□ 1.44
SREBF1-211ENST00000476994 TOM1L2Q6ZVM7 507 aa24.04■■□□□ 1.44
SREBF1-211ENST00000476994 R3HDM1Q15032 1099 aaKnown RBP24.03■■□□□ 1.44
SREBF1-211ENST00000476994 NFAT5O94916 1531 aa24.03■■□□□ 1.44
SREBF1-211ENST00000476994 RGPD5Q99666 1765 aa24.02■■□□□ 1.44
SREBF1-211ENST00000476994 PRKRIP1Q9H875 184 aaPredicted RBP24.02■■□□□ 1.44
SREBF1-211ENST00000476994 LTN1O94822 1766 aa24.01■■□□□ 1.43
SREBF1-211ENST00000476994 CAMKK2Q96RR4 588 aa24.01■■□□□ 1.43
SREBF1-211ENST00000476994 COL18A1P39060 1754 aa24.01■■□□□ 1.43
SREBF1-211ENST00000476994 WNK3Q9BYP7 1800 aa24■■□□□ 1.43
SREBF1-211ENST00000476994 RREB1Q92766 1687 aa24■■□□□ 1.43
SREBF1-211ENST00000476994 DDB1Q16531 1140 aa23.99■■□□□ 1.43
SREBF1-211ENST00000476994 NBPF14Q5TI25 921 aa23.99■■□□□ 1.43
SREBF1-211ENST00000476994 OVOS2A0A0G2JMS6 1433 aa23.99■■□□□ 1.43
SREBF1-211ENST00000476994 SOX12O15370 315 aa23.98■■□□□ 1.43
SREBF1-211ENST00000476994 CSB-PGBD3P0DP91 1061 aa23.98■■□□□ 1.43
SREBF1-211ENST00000476994 CDCA7Q9BWT1 371 aaPredicted RBP23.98■■□□□ 1.43
SREBF1-211ENST00000476994 WDR17Q8IZU2 1322 aa23.98■■□□□ 1.43
SREBF1-211ENST00000476994 LRRC37A3O60309 1634 aa23.97■■□□□ 1.43
SREBF1-211ENST00000476994 SBF2Q86WG5 1849 aa23.97■■□□□ 1.43
SREBF1-211ENST00000476994 COG3Q96JB2 828 aa23.97■■□□□ 1.43
SREBF1-211ENST00000476994 PEAK1Q9H792 1746 aa23.96■■□□□ 1.43
SREBF1-211ENST00000476994 RALBP1Q15311 655 aa23.96■■□□□ 1.43
SREBF1-211ENST00000476994 NUP188Q5SRE5 1749 aa23.96■■□□□ 1.43
SREBF1-211ENST00000476994 CNGB1Q14028 1251 aaPredicted RBP23.95■■□□□ 1.42
SREBF1-211ENST00000476994 MORC1Q86VD1 984 aa23.95■■□□□ 1.42
SREBF1-211ENST00000476994 ARHGEF25Q86VW2 580 aa23.95■■□□□ 1.42
SREBF1-211ENST00000476994 SMG6Q86US8 1419 aaKnown RBP23.94■■□□□ 1.42
SREBF1-211ENST00000476994 ANP32CO43423 234 aa23.93■■□□□ 1.42
SREBF1-211ENST00000476994 ABCC6O95255 1503 aa23.93■■□□□ 1.42
SREBF1-211ENST00000476994 AXIN2Q9Y2T1 843 aa23.92■■□□□ 1.42
SREBF1-211ENST00000476994 RGPD3A6NKT7 1758 aaPredicted RBP23.92■■□□□ 1.42
SREBF1-211ENST00000476994 RGPD4Q7Z3J3 1758 aa23.92■■□□□ 1.42
SREBF1-211ENST00000476994 FBLN1P23142 703 aa23.91■■□□□ 1.42
SREBF1-211ENST00000476994 PPP2R1AP30153 589 aa23.9■■□□□ 1.42
SREBF1-211ENST00000476994 CARD10Q9BWT7 1032 aa23.9■■□□□ 1.42
SREBF1-211ENST00000476994 MYBBP1AQ9BQG0 1328 aaKnown RBP23.89■■□□□ 1.42
SREBF1-211ENST00000476994 TNNT2P45379 298 aaPredicted RBP23.87■■□□□ 1.41
SREBF1-211ENST00000476994 MIER1Q8N108 512 aa23.87■■□□□ 1.41
SREBF1-211ENST00000476994 EXOC5O00471 708 aa23.86■■□□□ 1.41
SREBF1-211ENST00000476994 POLKQ9UBT6 870 aa23.86■■□□□ 1.41
SREBF1-211ENST00000476994 COL3A1P02461 1466 aaPredicted RBP23.86■■□□□ 1.41
SREBF1-211ENST00000476994 BCL11BQ9C0K0 894 aaPredicted RBP23.85■■□□□ 1.41
SREBF1-211ENST00000476994 KAT6BQ8WYB5 2073 aa23.84■■□□□ 1.41
SREBF1-211ENST00000476994 PLSCR1O15162 318 aa23.84■■□□□ 1.41
SREBF1-211ENST00000476994 MAP3K19Q56UN5 1328 aa23.84■■□□□ 1.41
SREBF1-211ENST00000476994 RRS1Q15050 365 aaKnown RBP23.83■■□□□ 1.41
SREBF1-211ENST00000476994 EMILIN1Q9Y6C2 1016 aa23.83■■□□□ 1.41
SREBF1-211ENST00000476994 INSRP06213 1382 aa23.81■■□□□ 1.4
SREBF1-211ENST00000476994 KIF24Q5T7B8 1368 aa23.81■■□□□ 1.4
SREBF1-211ENST00000476994 MARCH10Q8NA82 808 aaPredicted RBP23.81■■□□□ 1.4
SREBF1-211ENST00000476994 BCL9O00512 1426 aa23.81■■□□□ 1.4
SREBF1-211ENST00000476994 RTL1A6NKG5 1358 aa23.8■■□□□ 1.4
SREBF1-211ENST00000476994 MTHFSP49914 203 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms