RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 NME9Q86XW9 330 aa21.64■■□□□ 1.05
PSMD4-211ENST00000476855 USP31Q70CQ4 1352 aa21.63■■□□□ 1.05
PSMD4-211ENST00000476855 PHRF1Q9P1Y6 1649 aaKnown RBP21.63■■□□□ 1.05
PSMD4-211ENST00000476855 EN1Q05925 392 aaPredicted RBP21.63■■□□□ 1.05
PSMD4-211ENST00000476855 GGNBP2Q9H3C7 697 aa21.62■■□□□ 1.05
PSMD4-211ENST00000476855 BTG4Q9NY30 223 aa21.62■■□□□ 1.05
PSMD4-211ENST00000476855 CNGB1Q14028 1251 aaPredicted RBP21.6■■□□□ 1.05
PSMD4-211ENST00000476855 MIER1Q8N108 512 aa21.6■■□□□ 1.05
PSMD4-211ENST00000476855 LTN1O94822 1766 aa21.6■■□□□ 1.05
PSMD4-211ENST00000476855 SLIT3O75094 1523 aa21.6■■□□□ 1.05
PSMD4-211ENST00000476855 R3HDM1Q15032 1099 aaKnown RBP21.59■■□□□ 1.05
PSMD4-211ENST00000476855 RALBP1Q15311 655 aa21.59■■□□□ 1.05
PSMD4-211ENST00000476855 NRAPQ86VF7 1730 aa21.58■■□□□ 1.05
PSMD4-211ENST00000476855 FAM182BQ5T319 152 aa21.58■■□□□ 1.05
PSMD4-211ENST00000476855 PAK3O75914 559 aaPredicted RBP21.57■■□□□ 1.04
PSMD4-211ENST00000476855 NFAT5O94916 1531 aa21.56■■□□□ 1.04
PSMD4-211ENST00000476855 RGPD1P0DJD0 1748 aa21.56■■□□□ 1.04
PSMD4-211ENST00000476855 MORC1Q86VD1 984 aa21.55■■□□□ 1.04
PSMD4-211ENST00000476855 ABTB2Q8N961 1025 aa21.55■■□□□ 1.04
PSMD4-211ENST00000476855 DISP2A7MBM2 1401 aa21.55■■□□□ 1.04
PSMD4-211ENST00000476855 SPATA31A5Q5VU36 1347 aa21.55■■□□□ 1.04
PSMD4-211ENST00000476855 SPATA31A7Q8IWB4 1347 aa21.55■■□□□ 1.04
PSMD4-211ENST00000476855 MYBBP1AQ9BQG0 1328 aaKnown RBP21.55■■□□□ 1.04
PSMD4-211ENST00000476855 COL14A1Q05707 1796 aaKnown RBP21.54■■□□□ 1.04
PSMD4-211ENST00000476855 COG3Q96JB2 828 aa21.54■■□□□ 1.04
PSMD4-211ENST00000476855 PEAK1Q9H792 1746 aa21.54■■□□□ 1.04
PSMD4-211ENST00000476855 USP19O94966 1318 aa21.53■■□□□ 1.04
PSMD4-211ENST00000476855 NLRP6P59044 892 aa21.52■■□□□ 1.04
PSMD4-211ENST00000476855 EZH2Q15910 746 aaKnown RBP21.52■■□□□ 1.04
PSMD4-211ENST00000476855 AATKQ6ZMQ8 1374 aa21.51■■□□□ 1.03
PSMD4-211ENST00000476855 PPP2R1AP30153 589 aa21.51■■□□□ 1.03
PSMD4-211ENST00000476855 NUTM2GQ5VZR2 741 aa21.51■■□□□ 1.03
PSMD4-211ENST00000476855 SMG6Q86US8 1419 aaKnown RBP21.51■■□□□ 1.03
PSMD4-211ENST00000476855 RGPD5Q99666 1765 aa21.49■■□□□ 1.03
PSMD4-211ENST00000476855 NLRP13Q86W25 1043 aa21.49■■□□□ 1.03
PSMD4-211ENST00000476855 THSD7AQ9UPZ6 1657 aa21.49■■□□□ 1.03
PSMD4-211ENST00000476855 TNS1Q9HBL0 1735 aaKnown RBP21.49■■□□□ 1.03
PSMD4-211ENST00000476855 CAMKK2Q96RR4 588 aa21.48■■□□□ 1.03
PSMD4-211ENST00000476855 PRDM11Q9NQV5 511 aa21.48■■□□□ 1.03
PSMD4-211ENST00000476855 COL18A1P39060 1754 aa21.47■■□□□ 1.03
PSMD4-211ENST00000476855 CCER2I3L3R5 266 aa21.47■■□□□ 1.03
PSMD4-211ENST00000476855 TNNT2P45379 298 aaPredicted RBP21.47■■□□□ 1.03
PSMD4-211ENST00000476855 TRIM37O94972 964 aa21.46■■□□□ 1.03
PSMD4-211ENST00000476855 FBLN1P23142 703 aa21.46■■□□□ 1.03
PSMD4-211ENST00000476855 CCDC184Q52MB2 194 aa21.46■■□□□ 1.03
PSMD4-211ENST00000476855 FAM196AQ6ZSG2 479 aa21.46■■□□□ 1.03
PSMD4-211ENST00000476855 SPATA31A1Q5TZJ5 1347 aa21.45■■□□□ 1.02
PSMD4-211ENST00000476855 COL3A1P02461 1466 aaPredicted RBP21.45■■□□□ 1.02
PSMD4-211ENST00000476855 APBA3O96018 575 aa21.43■■□□□ 1.02
PSMD4-211ENST00000476855 POLKQ9UBT6 870 aa21.43■■□□□ 1.02
PSMD4-211ENST00000476855 KIAA0232Q92628 1395 aa21.41■■□□□ 1.02
PSMD4-211ENST00000476855 GCP02774 474 aa21.41■■□□□ 1.02
PSMD4-211ENST00000476855 YY1P25490 414 aa21.41■■□□□ 1.02
PSMD4-211ENST00000476855 MTHFSP49914 203 aa21.41■■□□□ 1.02
PSMD4-211ENST00000476855 KCNH5Q8NCM2 988 aa21.41■■□□□ 1.02
PSMD4-211ENST00000476855 ABCC6O95255 1503 aa21.4■■□□□ 1.02
PSMD4-211ENST00000476855 RRS1Q15050 365 aaKnown RBP21.4■■□□□ 1.02
PSMD4-211ENST00000476855 CHRNA2Q15822 529 aa21.4■■□□□ 1.02
PSMD4-211ENST00000476855 STRN4Q9NRL3 753 aa21.4■■□□□ 1.02
PSMD4-211ENST00000476855 EMILIN1Q9Y6C2 1016 aa21.4■■□□□ 1.02
PSMD4-211ENST00000476855 LMO7Q8WWI1 1683 aa21.4■■□□□ 1.02
PSMD4-211ENST00000476855 INSRP06213 1382 aa21.39■■□□□ 1.02
PSMD4-211ENST00000476855 RGPD2P0DJD1 1756 aa21.39■■□□□ 1.01
PSMD4-211ENST00000476855 MAP3K19Q56UN5 1328 aa21.39■■□□□ 1.01
PSMD4-211ENST00000476855 SOX12O15370 315 aa21.39■■□□□ 1.01
PSMD4-211ENST00000476855 KIF24Q5T7B8 1368 aa21.38■■□□□ 1.01
PSMD4-211ENST00000476855 MRS2Q9HD23 443 aa21.37■■□□□ 1.01
PSMD4-211ENST00000476855 RTL1A6NKG5 1358 aa21.36■■□□□ 1.01
PSMD4-211ENST00000476855 CPDO75976 1380 aa21.36■■□□□ 1.01
PSMD4-211ENST00000476855 ZC3H6P61129 1189 aaKnown RBP21.36■■□□□ 1.01
PSMD4-211ENST00000476855 PDE3BQ13370 1112 aa21.36■■□□□ 1.01
PSMD4-211ENST00000476855 NBPF14Q5TI25 921 aa21.36■■□□□ 1.01
PSMD4-211ENST00000476855 USP35Q9P2H5 1018 aa21.36■■□□□ 1.01
PSMD4-211ENST00000476855 FLT4P35916 1363 aa21.36■■□□□ 1.01
PSMD4-211ENST00000476855 BARGINQ6ZT62 677 aa21.35■■□□□ 1.01
PSMD4-211ENST00000476855 ARHGEF25Q86VW2 580 aa21.35■■□□□ 1.01
PSMD4-211ENST00000476855 FAM208AQ9UK61 1670 aaKnown RBP21.34■■□□□ 1.01
PSMD4-211ENST00000476855 EVA1CP58658 441 aa21.34■■□□□ 1.01
PSMD4-211ENST00000476855 RREB1Q92766 1687 aa21.33■■□□□ 1
PSMD4-211ENST00000476855 CAMTA1Q9Y6Y1 1673 aa21.33■■□□□ 1
PSMD4-211ENST00000476855 HOXC9P31274 260 aa21.31■■□□□ 1
PSMD4-211ENST00000476855 SPON1Q9HCB6 807 aa21.31■■□□□ 1
PSMD4-211ENST00000476855 PPP1R1BQ9UD71 204 aaPredicted RBP21.31■■□□□ 1
PSMD4-211ENST00000476855 NUP188Q5SRE5 1749 aa21.3■■□□□ 1
PSMD4-211ENST00000476855 PPM1GO15355 546 aaPredicted RBP21.3■■□□□ 1
PSMD4-211ENST00000476855 PNISRQ8TF01 805 aaKnown RBP21.3■■□□□ 1
PSMD4-211ENST00000476855 CFAP53Q96M91 514 aa21.3■■□□□ 1
PSMD4-211ENST00000476855 DCAF8L1A6NGE4 600 aa21.29■■□□□ 1
PSMD4-211ENST00000476855 AMPHP49418 695 aa21.29■■□□□ 1
PSMD4-211ENST00000476855 TCP11L2Q8N4U5 519 aa21.29■■□□□ 1
PSMD4-211ENST00000476855 IP6K1Q92551 441 aa21.29■■□□□ 1
PSMD4-211ENST00000476855 KCNQ2O43526 872 aa21.28■■□□□ 1
PSMD4-211ENST00000476855 HSP90AB2PQ58FF8 381 aa21.28■■□□□ 1
PSMD4-211ENST00000476855 LARP1Q6PKG0 1096 aaKnown RBP21.28■■□□□ 1
PSMD4-211ENST00000476855 DIAPH1O60610 1272 aaKnown RBP21.25■□□□□ 0.99
PSMD4-211ENST00000476855 IL13P35225 146 aa21.25■□□□□ 0.99
PSMD4-211ENST00000476855 THRAP3Q9Y2W1 955 aaKnown RBP21.25■□□□□ 0.99
PSMD4-211ENST00000476855 ZBTB7CA1YPR0 619 aa21.24■□□□□ 0.99
PSMD4-211ENST00000476855 EIF4A2Q14240 407 aaKnown RBP21.24■□□□□ 0.99
PSMD4-211ENST00000476855 AXIN2Q9Y2T1 843 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms