RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 WDR17Q8IZU2 1322 aa15.19■□□□□ 0.02
SEC13-214ENST00000476597 CLSPNQ9HAW4 1339 aa15.19■□□□□ 0.02
SEC13-214ENST00000476597 TRIM37O94972 964 aa15.19■□□□□ 0.02
SEC13-214ENST00000476597 A0A1W2PP64 1363 aa15.18■□□□□ 0.02
SEC13-214ENST00000476597 EDC4Q6P2E9 1401 aaKnown RBP15.17■□□□□ 0.02
SEC13-214ENST00000476597 CARD10Q9BWT7 1032 aa15.17■□□□□ 0.02
SEC13-214ENST00000476597 AKAP12Q02952 1782 aa15.16■□□□□ 0.02
SEC13-214ENST00000476597 NINLQ9Y2I6 1382 aa15.16■□□□□ 0.02
SEC13-214ENST00000476597 C11orf95C9JLR9 678 aaPredicted RBP15.16■□□□□ 0.02
SEC13-214ENST00000476597 CSB-PGBD3P0DP91 1061 aa15.16■□□□□ 0.02
SEC13-214ENST00000476597 TMF1P82094 1093 aa15.16■□□□□ 0.02
SEC13-214ENST00000476597 CAMKK2Q96RR4 588 aa15.16■□□□□ 0.02
SEC13-214ENST00000476597 CDCA7Q9BWT1 371 aaPredicted RBP15.16■□□□□ 0.02
SEC13-214ENST00000476597 DISP2A7MBM2 1401 aa15.16■□□□□ 0.02
SEC13-214ENST00000476597 USP47Q96K76 1375 aa15.15■□□□□ 0.02
SEC13-214ENST00000476597 APBA3O96018 575 aa15.15■□□□□ 0.02
SEC13-214ENST00000476597 EZH2Q15910 746 aaKnown RBP15.15■□□□□ 0.02
SEC13-214ENST00000476597 DDB1Q16531 1140 aa15.15■□□□□ 0.02
SEC13-214ENST00000476597 NFAT5O94916 1531 aa15.15■□□□□ 0.02
SEC13-214ENST00000476597 COL18A1P39060 1754 aa15.14■□□□□ 0.01
SEC13-214ENST00000476597 CDCA8Q53HL2 280 aa15.12■□□□□ 0.01
SEC13-214ENST00000476597 MON2Q7Z3U7 1717 aa15.12■□□□□ 0.01
SEC13-214ENST00000476597 EXOC5O00471 708 aa15.11■□□□□ 0.01
SEC13-214ENST00000476597 MARCH10Q8NA82 808 aaPredicted RBP15.11■□□□□ 0.01
SEC13-214ENST00000476597 CCDC7Q96M83 1385 aa15.11■□□□□ 0.01
SEC13-214ENST00000476597 OVOS2A0A0J9YW53 1432 aa15.1■□□□□ 0.01
SEC13-214ENST00000476597 OVOS2Q6IE36 1432 aa15.1■□□□□ 0.01
SEC13-214ENST00000476597 PSDA5PKW4 1024 aaPredicted RBP15.1■□□□□ 0.01
SEC13-214ENST00000476597 ANKRD24Q8TF21 1146 aa15.1■□□□□ 0.01
SEC13-214ENST00000476597 IP6K1Q92551 441 aa15.1■□□□□ 0.01
SEC13-214ENST00000476597 COG3Q96JB2 828 aa15.1■□□□□ 0.01
SEC13-214ENST00000476597 ERBB3P21860 1342 aa15.1■□□□□ 0.01
SEC13-214ENST00000476597 ANKRD36BQ8N2N9 1353 aa15.1■□□□□ 0.01
SEC13-214ENST00000476597 ABCC6O95255 1503 aa15.09■□□□□ 0.01
SEC13-214ENST00000476597 NLRP2Q9NX02 1062 aa15.09■□□□□ 0.01
SEC13-214ENST00000476597 PARD3Q8TEW0 1356 aa15.09■□□□□ 0.01
SEC13-214ENST00000476597 OVOS2A0A0G2JMS6 1433 aa15.09■□□□□ 0.01
SEC13-214ENST00000476597 FYB1O15117 783 aa15.08■□□□□ 0
SEC13-214ENST00000476597 RGPD1P0DJD0 1748 aa15.08■□□□□ 0
SEC13-214ENST00000476597 PARP4Q9UKK3 1724 aaKnown RBP15.07■□□□□ 0
SEC13-214ENST00000476597 FBLN1P23142 703 aa15.07■□□□□ 0
SEC13-214ENST00000476597 R3HDM1Q15032 1099 aaKnown RBP15.07■□□□□ 0
SEC13-214ENST00000476597 BCL11BQ9C0K0 894 aaPredicted RBP15.07■□□□□ 0
SEC13-214ENST00000476597 BCL9O00512 1426 aa15.07■□□□□ 0
SEC13-214ENST00000476597 USP54Q70EL1 1684 aa15.06■□□□□ 0
SEC13-214ENST00000476597 PLSCR1O15162 318 aa15.06■□□□□ 0
SEC13-214ENST00000476597 IL2RBP14784 551 aa15.05■□□□□ -0
SEC13-214ENST00000476597 PTF1AQ7RTS3 328 aa15.05■□□□□ -0
SEC13-214ENST00000476597 CCER1Q8TC90 406 aaPredicted RBP15.05■□□□□ -0
SEC13-214ENST00000476597 GGNBP2Q9H3C7 697 aa15.05■□□□□ -0
SEC13-214ENST00000476597 MAP3K19Q56UN5 1328 aa15.05■□□□□ -0
SEC13-214ENST00000476597 TNS1Q9HBL0 1735 aaKnown RBP15.04■□□□□ -0
SEC13-214ENST00000476597 HOXC9P31274 260 aa15.04■□□□□ -0
SEC13-214ENST00000476597 NBPF14Q5TI25 921 aa15.04■□□□□ -0
SEC13-214ENST00000476597 CARD14Q9BXL6 1004 aa15.04■□□□□ -0
SEC13-214ENST00000476597 AMPHP49418 695 aa15.03■□□□□ -0
SEC13-214ENST00000476597 LTV1Q96GA3 475 aaPredicted RBP15.03■□□□□ -0
SEC13-214ENST00000476597 PEAK1Q9H792 1746 aa15.02□□□□□ -0.01
SEC13-214ENST00000476597 LRRC37A3O60309 1634 aa15.02□□□□□ -0.01
SEC13-214ENST00000476597 RRS1Q15050 365 aaKnown RBP15.01□□□□□ -0.01
SEC13-214ENST00000476597 PROM2Q8N271 834 aa15.01□□□□□ -0.01
SEC13-214ENST00000476597 RGPD5Q99666 1765 aa15.01□□□□□ -0.01
SEC13-214ENST00000476597 KCNQ2O43526 872 aa15□□□□□ -0.01
SEC13-214ENST00000476597 EIF4G2P78344 907 aaKnown RBP eCLIP15□□□□□ -0.01
SEC13-214ENST00000476597 TNS2Q63HR2 1409 aa15□□□□□ -0.01
SEC13-214ENST00000476597 HSPA5P11021 654 aaKnown RBP14.98□□□□□ -0.01
SEC13-214ENST00000476597 NBPF6Q5VWK0 638 aa14.97□□□□□ -0.01
SEC13-214ENST00000476597 ACSBG1Q96GR2 724 aa14.97□□□□□ -0.01
SEC13-214ENST00000476597 NBPF4Q96M43 638 aa14.97□□□□□ -0.01
SEC13-214ENST00000476597 RTL1A6NKG5 1358 aa14.97□□□□□ -0.01
SEC13-214ENST00000476597 TXNRD1Q16881 649 aa14.96□□□□□ -0.01
SEC13-214ENST00000476597 HSP90AB2PQ58FF8 381 aa14.96□□□□□ -0.01
SEC13-214ENST00000476597 NSD3Q9BZ95 1437 aa14.96□□□□□ -0.01
SEC13-214ENST00000476597 LTN1O94822 1766 aa14.96□□□□□ -0.02
SEC13-214ENST00000476597 DDX54Q8TDD1 881 aaKnown RBP14.95□□□□□ -0.02
SEC13-214ENST00000476597 ZCRB1Q8TBF4 217 aaKnown RBP14.94□□□□□ -0.02
SEC13-214ENST00000476597 POLR3GLQ9BT43 218 aa14.94□□□□□ -0.02
SEC13-214ENST00000476597 ANO8Q9HCE9 1232 aaPredicted RBP14.94□□□□□ -0.02
SEC13-214ENST00000476597 INSRP06213 1382 aa14.94□□□□□ -0.02
SEC13-214ENST00000476597 KIF24Q5T7B8 1368 aa14.94□□□□□ -0.02
SEC13-214ENST00000476597 WNK3Q9BYP7 1800 aa14.94□□□□□ -0.02
SEC13-214ENST00000476597 CGNL1Q0VF96 1302 aa14.93□□□□□ -0.02
SEC13-214ENST00000476597 RREB1Q92766 1687 aa14.93□□□□□ -0.02
SEC13-214ENST00000476597 LRP5O75197 1615 aa14.92□□□□□ -0.02
SEC13-214ENST00000476597 USHBP1Q8N6Y0 703 aa14.92□□□□□ -0.02
SEC13-214ENST00000476597 EMILIN1Q9Y6C2 1016 aa14.92□□□□□ -0.02
SEC13-214ENST00000476597 FLT4P35916 1363 aa14.92□□□□□ -0.02
SEC13-214ENST00000476597 SBF2Q86WG5 1849 aa14.91□□□□□ -0.02
SEC13-214ENST00000476597 NUP188Q5SRE5 1749 aa14.9□□□□□ -0.02
SEC13-214ENST00000476597 SLC15A2Q16348 729 aa14.9□□□□□ -0.02
SEC13-214ENST00000476597 RAPGEF4Q8WZA2 1011 aa14.9□□□□□ -0.02
SEC13-214ENST00000476597 PANK3Q9H999 370 aa14.9□□□□□ -0.02
SEC13-214ENST00000476597 SPON1Q9HCB6 807 aa14.9□□□□□ -0.02
SEC13-214ENST00000476597 STK32BQ9NY57 414 aa14.9□□□□□ -0.02
SEC13-214ENST00000476597 SMG6Q86US8 1419 aaKnown RBP14.9□□□□□ -0.02
SEC13-214ENST00000476597 WASHC2AQ641Q2 1341 aa14.9□□□□□ -0.02
SEC13-214ENST00000476597 TATP17735 454 aaPredicted RBP14.89□□□□□ -0.03
SEC13-214ENST00000476597 PRIM1P49642 420 aaKnown RBP14.89□□□□□ -0.03
SEC13-214ENST00000476597 POLKQ9UBT6 870 aa14.89□□□□□ -0.03
SEC13-214ENST00000476597 MEGF6O75095 1541 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms