RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 TMEM57Q8N5G2 664 aa10.48□□□□□ -0.73
MACF1-216ENST00000476350 GBP4Q96PP9 640 aa10.48□□□□□ -0.73
MACF1-216ENST00000476350 HSP90AA1P07900 732 aaKnown RBP10.48□□□□□ -0.73
MACF1-216ENST00000476350 CLCN1P35523 988 aa10.48□□□□□ -0.73
MACF1-216ENST00000476350 SSH1Q8WYL5 1049 aa10.48□□□□□ -0.73
MACF1-216ENST00000476350 CABP2Q9NPB3 220 aa10.48□□□□□ -0.73
MACF1-216ENST00000476350 ARHGEF28Q8N1W1 1705 aaKnown RBP10.48□□□□□ -0.73
MACF1-216ENST00000476350 PTMSP20962 102 aa10.47□□□□□ -0.73
MACF1-216ENST00000476350 RPGRIP1LQ68CZ1 1315 aa10.47□□□□□ -0.73
MACF1-216ENST00000476350 NUCB1Q02818 461 aa10.47□□□□□ -0.73
MACF1-216ENST00000476350 GORABQ5T7V8 394 aa10.47□□□□□ -0.73
MACF1-216ENST00000476350 NCOA3Q9Y6Q9 1424 aa10.47□□□□□ -0.73
MACF1-216ENST00000476350 IPO8O15397 1037 aaKnown RBP10.47□□□□□ -0.73
MACF1-216ENST00000476350 BAG6P46379 1132 aa10.47□□□□□ -0.73
MACF1-216ENST00000476350 PLEKHF1Q96S99 279 aa10.47□□□□□ -0.73
MACF1-216ENST00000476350 CAMSAP1Q5T5Y3 1602 aa10.47□□□□□ -0.73
MACF1-216ENST00000476350 KRI1Q8N9T8 703 aaKnown RBP10.47□□□□□ -0.73
MACF1-216ENST00000476350 GLIPR1L2Q4G1C9 344 aa10.46□□□□□ -0.73
MACF1-216ENST00000476350 TRIM44Q96DX7 344 aaPredicted RBP10.46□□□□□ -0.73
MACF1-216ENST00000476350 TMPOP42166 694 aaKnown RBP10.46□□□□□ -0.73
MACF1-216ENST00000476350 TNPO1Q92973 898 aaKnown RBP10.46□□□□□ -0.73
MACF1-216ENST00000476350 SNX21Q969T3 373 aa10.46□□□□□ -0.73
MACF1-216ENST00000476350 AMOTL1Q8IY63 956 aa10.46□□□□□ -0.74
MACF1-216ENST00000476350 FOXD4L1Q9NU39 408 aa10.46□□□□□ -0.74
MACF1-216ENST00000476350 ABCC11Q96J66 1382 aa10.46□□□□□ -0.74
MACF1-216ENST00000476350 CASC1Q6TDU7 716 aa10.46□□□□□ -0.74
MACF1-216ENST00000476350 CCAR1Q8IX12 1150 aaKnown RBP10.46□□□□□ -0.74
MACF1-216ENST00000476350 ZNF692Q9BU19 519 aaPredicted RBP10.46□□□□□ -0.74
MACF1-216ENST00000476350 BCL11BQ9C0K0 894 aaPredicted RBP10.46□□□□□ -0.74
MACF1-216ENST00000476350 KIF16BQ96L93 1317 aa10.46□□□□□ -0.74
MACF1-216ENST00000476350 TATP17735 454 aaPredicted RBP10.45□□□□□ -0.74
MACF1-216ENST00000476350 CHD1LQ86WJ1 897 aa10.45□□□□□ -0.74
MACF1-216ENST00000476350 TRIM35Q9UPQ4 493 aa10.45□□□□□ -0.74
MACF1-216ENST00000476350 KIDINS220Q9ULH0 1771 aa10.45□□□□□ -0.74
MACF1-216ENST00000476350 RBM25P49756 843 aaKnown RBP10.45□□□□□ -0.74
MACF1-216ENST00000476350 SKOR2Q2VWA4 1001 aaPredicted RBP10.45□□□□□ -0.74
MACF1-216ENST00000476350 COL3A1P02461 1466 aaPredicted RBP10.45□□□□□ -0.74
MACF1-216ENST00000476350 RIPK4P57078 832 aa10.45□□□□□ -0.74
MACF1-216ENST00000476350 ZNF772Q68DY9 489 aaPredicted RBP10.45□□□□□ -0.74
MACF1-216ENST00000476350 ADAMTS2O95450 1211 aa10.45□□□□□ -0.74
MACF1-216ENST00000476350 SMC5Q8IY18 1101 aa10.45□□□□□ -0.74
MACF1-216ENST00000476350 IL16Q14005 1332 aa10.45□□□□□ -0.74
MACF1-216ENST00000476350 ANKRD26Q9UPS8 1709 aa10.45□□□□□ -0.74
MACF1-216ENST00000476350 NLRP6P59044 892 aa10.44□□□□□ -0.74
MACF1-216ENST00000476350 LNPKQ9C0E8 428 aa10.44□□□□□ -0.74
MACF1-216ENST00000476350 LRRC59Q96AG4 307 aaKnown RBP10.44□□□□□ -0.74
MACF1-216ENST00000476350 DDIT3P35638 169 aa10.44□□□□□ -0.74
MACF1-216ENST00000476350 KCNJ4P48050 445 aa10.44□□□□□ -0.74
MACF1-216ENST00000476350 ZBTB40Q9NUA8 1239 aa10.44□□□□□ -0.74
MACF1-216ENST00000476350 A0A1W2PP64 1363 aa10.44□□□□□ -0.74
MACF1-216ENST00000476350 ABTB2Q8N961 1025 aa10.43□□□□□ -0.74
MACF1-216ENST00000476350 MINK1Q8N4C8 1332 aaPredicted RBP10.43□□□□□ -0.74
MACF1-216ENST00000476350 RAB3GAP1Q15042 981 aa10.43□□□□□ -0.74
MACF1-216ENST00000476350 CIZ1Q9ULV3 898 aaPredicted RBP10.43□□□□□ -0.74
MACF1-216ENST00000476350 ANKRD45Q5TZF3 282 aa10.43□□□□□ -0.74
MACF1-216ENST00000476350 GGNBP2Q9H3C7 697 aa10.43□□□□□ -0.74
MACF1-216ENST00000476350 NPATQ14207 1427 aa10.42□□□□□ -0.74
MACF1-216ENST00000476350 ALDH1L2Q3SY69 923 aa10.42□□□□□ -0.74
MACF1-216ENST00000476350 HECW2Q9P2P5 1572 aa10.42□□□□□ -0.74
MACF1-216ENST00000476350 TNRQ92752 1358 aa10.42□□□□□ -0.74
MACF1-216ENST00000476350 KCNH5Q8NCM2 988 aa10.42□□□□□ -0.74
MACF1-216ENST00000476350 PUS7Q96PZ0 661 aaKnown RBP10.42□□□□□ -0.74
MACF1-216ENST00000476350 BEGAINQ9BUH8 593 aa10.42□□□□□ -0.74
MACF1-216ENST00000476350 NEXNQ0ZGT2 675 aa10.42□□□□□ -0.74
MACF1-216ENST00000476350 PAXIP1Q6ZW49 1069 aaPredicted RBP10.42□□□□□ -0.74
MACF1-216ENST00000476350 GOLGA6L22H0YM25 854 aa10.41□□□□□ -0.74
MACF1-216ENST00000476350 K7ELQ4 463 aaPredicted RBP10.41□□□□□ -0.74
MACF1-216ENST00000476350 HSP90AA2PQ14568 343 aaPredicted RBP10.41□□□□□ -0.74
MACF1-216ENST00000476350 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.41□□□□□ -0.74
MACF1-216ENST00000476350 KIF20BQ96Q89 1820 aa10.41□□□□□ -0.74
MACF1-216ENST00000476350 C1orf115Q9H7X2 142 aa10.41□□□□□ -0.74
MACF1-216ENST00000476350 DIAPH1O60610 1272 aaKnown RBP10.41□□□□□ -0.74
MACF1-216ENST00000476350 SLC26A8Q96RN1 970 aa10.41□□□□□ -0.74
MACF1-216ENST00000476350 ZRANB1Q9UGI0 708 aa10.41□□□□□ -0.74
MACF1-216ENST00000476350 BMP2KLQ5H9B9 411 aa10.4□□□□□ -0.74
MACF1-216ENST00000476350 GCC1Q96CN9 775 aa10.4□□□□□ -0.74
MACF1-216ENST00000476350 ESPNB1AK53 854 aa10.4□□□□□ -0.74
MACF1-216ENST00000476350 ANP32BQ92688 251 aaKnown RBP10.4□□□□□ -0.74
MACF1-216ENST00000476350 SPG7Q9UQ90 795 aa10.4□□□□□ -0.74
MACF1-216ENST00000476350 NEXMIFQ5QGS0 1516 aa10.4□□□□□ -0.74
MACF1-216ENST00000476350 DDX58O95786 925 aaKnown RBP10.4□□□□□ -0.75
MACF1-216ENST00000476350 NPHP3Q7Z494 1330 aa10.4□□□□□ -0.75
MACF1-216ENST00000476350 PPIP5K1Q6PFW1 1433 aa10.39□□□□□ -0.75
MACF1-216ENST00000476350 ABCC3O15438 1527 aa10.39□□□□□ -0.75
MACF1-216ENST00000476350 ASXL2Q76L83 1435 aa10.39□□□□□ -0.75
MACF1-216ENST00000476350 CHMP3Q9Y3E7 222 aa10.39□□□□□ -0.75
MACF1-216ENST00000476350 CCDC173Q0VFZ6 552 aa10.39□□□□□ -0.75
MACF1-216ENST00000476350 PLEKHO1Q53GL0 409 aaPredicted RBP10.39□□□□□ -0.75
MACF1-216ENST00000476350 ERBB4Q15303 1308 aa10.39□□□□□ -0.75
MACF1-216ENST00000476350 FRMPD1Q5SYB0 1578 aa10.39□□□□□ -0.75
MACF1-216ENST00000476350 TBC1D9Q6ZT07 1266 aa10.39□□□□□ -0.75
MACF1-216ENST00000476350 SIGLEC1Q9BZZ2 1709 aa10.39□□□□□ -0.75
MACF1-216ENST00000476350 PIK3C2BO00750 1634 aa10.38□□□□□ -0.75
MACF1-216ENST00000476350 RRP9O43818 475 aaKnown RBP10.38□□□□□ -0.75
MACF1-216ENST00000476350 MED14O60244 1454 aa10.38□□□□□ -0.75
MACF1-216ENST00000476350 CDC45O75419 566 aa10.38□□□□□ -0.75
MACF1-216ENST00000476350 SSFA2P28290 1259 aa10.38□□□□□ -0.75
MACF1-216ENST00000476350 LRRC7Q96NW7 1537 aa10.38□□□□□ -0.75
MACF1-216ENST00000476350 GAS2L3Q86XJ1 694 aa10.37□□□□□ -0.75
MACF1-216ENST00000476350 STK32BQ9NY57 414 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms